-<html>\r
-<head>\r
-<title>Alignment Window Menus</title>\r
-</head>\r
-\r
-<body>\r
-<p><strong>Alignment Window View Menu</strong></p>\r
-<ul>\r
- <li><strong>New View (Control T)</strong><em><br>\r
- Creates a new view from the current alignment view. </em></li>\r
- <li><strong>Expand Views (X)</strong><em><br>\r
- Display each view associated with the alignment in its own alignment window, \r
- allowing several views to be displayed simultaneously. </em></li>\r
- <li><strong>Gather Views (G)</strong><em><br>\r
- Each view associated with the alignment will be displayed within its own tab \r
- on the current alignment window. </em></li>\r
- <li><strong>Show→(all Columns / Sequences)</strong><em><br>\r
- All hidden Columns / Sequences will be revealed. </em></li>\r
- <li><strong>Hide→(all Columns / Sequences)</strong><em><br>\r
- Hides the all the currently selected Columns / Sequences</em></li>\r
- <li><strong>Show Annotations<br>\r
- </strong><em>If this is selected the "Annotation Panel" will be \r
- displayed below the alignment. The default setting is to display the conservation \r
- calculation, quality calculation and consensus values as bar charts. </em></li>\r
- <li><strong>Show Sequence Features</strong><br>\r
- <em>Show or hide sequence features on this alignment.</em></li>\r
- <li><strong><a href="../features/featuresettings.html">Seqence Feature Settings...</a></strong><em><br>\r
- Opens the Sequence Feature Settings dialog box to control the colour and display \r
- of sequence features on the alignment, and configure and retrieve features \r
- from DAS annotation servers.</em></li>\r
- <li><strong>Alignment Properties<br>\r
- </strong><em>Displays simple properties of current alignment view with additional \r
- global alignment properties</em></li>\r
- <li><strong><a href="../features/overview.html">Overview Window</a><br>\r
- </strong><em>A scaled version of the alignment will be displayed in a small \r
- window. A red box will indicate the currently visible area of the alignment. \r
- Move the visible region using the mouse. </em></li>\r
-</ul>\r
-<p> </p>\r
-</body>\r
-</html>\r
+<html>
+<head>
+<title>Alignment Window Menus</title>
+</head>
+
+<body>
+<p><strong>Alignment Window View Menu</strong></p>
+<ul>
+ <li><strong>New View (Control T)</strong><em><br>
+ Creates a new view from the current alignment view. </em></li>
+ <li><strong>Expand Views (X)</strong><em><br>
+ Display each view associated with the alignment in its own alignment window,
+ allowing several views to be displayed simultaneously. </em></li>
+ <li><strong>Gather Views (G)</strong><em><br>
+ Each view associated with the alignment will be displayed within its own tab
+ on the current alignment window. </em></li>
+ <li><strong>Show→(all Columns / Sequences)</strong><em><br>
+ All hidden Columns / Sequences will be revealed. </em></li>
+ <li><strong>Hide→(all Columns / Sequences)</strong><em><br>
+ Hides the currently selected Columns / Sequences</em></li>
+ <li><strong>Show Annotations<br>
+ </strong><em>If this is selected the "Annotation Panel" will be
+ displayed below the alignment. The default setting is to display the conservation
+ calculation, quality calculation and consensus values as bar charts. </em></li>
+ <li><strong>Show Sequence Features</strong><br>
+ <em>Show or hide sequence features on this alignment.</em></li>
+ <li><strong><a href="../features/featuresettings.html">Seqence Feature Settings...</a></strong><em><br>
+ Opens the Sequence Feature Settings dialog box to control the colour and display
+ of sequence features on the alignment, and configure and retrieve features
+ from DAS annotation servers.</em></li>
+ <li><strong>Alignment Properties...<br>
+ </strong><em>Displays some simple statistics computed for the
+ current alignment view and any named properties defined on the
+ whole alignment.</em></li>
+ <li><strong><a href="../features/overview.html">Overview Window</a><br>
+ </strong><em>A scaled version of the alignment will be displayed in a small
+ window. A red box will indicate the currently visible area of the alignment.
+ Move the visible region using the mouse. </em></li>
+</ul>
+<p> </p>
+</body>
+</html>
git://source.jalview.org / jalview.git / commitdiff