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[jalview.git] / src / jalview / appletgui / AlignFrame.java

2006-07-12	amwaterhouse	sequences are private in SequenceGroup	blob \| commitdiff
2006-07-07	amwaterhouse	Prepare for launchFullApplication	blob \| commitdiff \| diff to current
2006-06-23	amwaterhouse	Parse HTML links from jalview features file	blob \| commitdiff \| diff to current
2006-06-23	amwaterhouse	Uses FeaturesFile parser, GFF and Jalview	blob \| commitdiff \| diff to current
2006-06-15	amwaterhouse	Correct citation	blob \| commitdiff \| diff to current
2006-06-07	amwaterhouse	Tooltips for features, links for features added	blob \| commitdiff \| diff to current
2006-04-10	amwaterhouse	del and backspace do the same thing	blob \| commitdiff \| diff to current
2006-04-04	amwaterhouse	Set keyboard numbers to null if esc pressed	blob \| commitdiff \| diff to current
2006-04-04	amwaterhouse	Keyboard editing added to applet	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	Annotation colour scheme added	blob \| commitdiff \| diff to current
2006-03-16	amwaterhouse	Load tree	blob \| commitdiff \| diff to current
2006-03-08	amwaterhouse	Pack resources in Zip file	blob \| commitdiff \| diff to current
2006-02-24	amwaterhouse	Inform user of groups error parsing	blob \| commitdiff \| diff to current
2006-02-15	amwaterhouse	Features file has startgroup, endgroup	blob \| commitdiff \| diff to current
2006-02-13	amwaterhouse	Parsing features file - dont adjust for alignment position	blob \| commitdiff \| diff to current
2006-02-10	amwaterhouse	Overview displays features	blob \| commitdiff \| diff to current
2006-02-09	amwaterhouse	Feature Settings added to Applet	blob \| commitdiff \| diff to current
2006-02-09	amwaterhouse	New implementation for holding search results	blob \| commitdiff \| diff to current
2006-02-03	amwaterhouse	Applet reads in annotation files	blob \| commitdiff \| diff to current
2006-01-30	amwaterhouse	Allow embedded applet	blob \| commitdiff \| diff to current
2005-12-22	amwaterhouse	Reduced jar size by 20%	blob \| commitdiff \| diff to current
2005-12-09	amwaterhouse	Keylistener added to frame and seqcanvas	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	after merge	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-09-28	amwaterhouse	Applet frame name	blob \| commitdiff \| diff to current
2005-09-28	amwaterhouse	Wrap alignment with annotations	blob \| commitdiff \| diff to current
2005-09-22	amwaterhouse	Create instance of FormatAdapter	blob \| commitdiff \| diff to current
2005-09-21	amwaterhouse	Sequences must be aligned before PCA	blob \| commitdiff \| diff to current
2005-09-20	amwaterhouse	PCAPanel checks viewport selection group	blob \| commitdiff \| diff to current
2005-09-15	amwaterhouse	Applet has main method, excutable	blob \| commitdiff \| diff to current
2005-09-12	amwaterhouse	Remove gaps in regions, not char by char	blob \| commitdiff \| diff to current
2005-09-12	amwaterhouse	Update overview in alignmentChanged	blob \| commitdiff \| diff to current
2005-09-08	amwaterhouse	TreePanel takes viewport	blob \| commitdiff \| diff to current
2005-09-01	amwaterhouse	Need reference to mainApplet	blob \| commitdiff \| diff to current
2005-09-01	amwaterhouse	Use propertyListener for alignment edits	blob \| commitdiff \| diff to current
2005-08-31	amwaterhouse	Repaint scale panel after unselect all	blob \| commitdiff \| diff to current
2005-08-30	amwaterhouse	Update colours after remove left, cut, paste	blob \| commitdiff \| diff to current
2005-08-29	amwaterhouse	Reset all colour schemes after gaps removed	blob \| commitdiff \| diff to current
2005-08-29	amwaterhouse	Keep startRes the same after removing columns	blob \| commitdiff \| diff to current
2005-08-29	amwaterhouse	Reset ClustalX after removing gaps	blob \| commitdiff \| diff to current
2005-08-24	amwaterhouse	Set threshold 0 if conservation	blob \| commitdiff \| diff to current
2005-08-23	amwaterhouse	End res of selection group corrected	blob \| commitdiff \| diff to current
2005-08-23	amwaterhouse	Add windowListener in constructor	blob \| commitdiff \| diff to current
2005-08-23	amwaterhouse	Remove ref in PaintRefresher on close, changeColour...	blob \| commitdiff \| diff to current
2005-08-22	amwaterhouse	Check for null colour	blob \| commitdiff \| diff to current
2005-08-22	amwaterhouse	Conservation colour scheme is no more	blob \| commitdiff \| diff to current
2005-08-17	amwaterhouse	Read in version from build details file in applet jar	blob \| commitdiff \| diff to current
2005-08-15	amwaterhouse	IgnoreGapsConsensus	blob \| commitdiff \| diff to current
2005-08-03	amwaterhouse	Version 2.02	blob \| commitdiff \| diff to current
2005-07-29	amwaterhouse	Remove ref to ServletGUI	blob \| commitdiff \| diff to current
2005-07-29	amwaterhouse	Correct label for end res in copy	blob \| commitdiff \| diff to current
2005-07-18	amwaterhouse	Copy seq ordering bug fixed	blob \| commitdiff \| diff to current
2005-07-11	amwaterhouse	Must check if group.sequences are null in remove gaps	blob \| commitdiff \| diff to current
2005-07-11	amwaterhouse	check groupsize is non zero	blob \| commitdiff \| diff to current
2005-07-11	amwaterhouse	Release and build date methods changed	blob \| commitdiff \| diff to current
2005-07-07	amwaterhouse	Remove all gaps must check jSize	blob \| commitdiff \| diff to current
2005-07-06	amwaterhouse	Help file url changed	blob \| commitdiff \| diff to current
2005-06-16	amwaterhouse	Sort Groups modified	blob \| commitdiff \| diff to current
2005-06-16	amwaterhouse	remove gaps applies to selected area	blob \| commitdiff \| diff to current
2005-06-13	amwaterhouse	PaintRefresh changed	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	recalc group conserve	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Formatted source	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	GPL license added	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Add email to about	blob \| commitdiff \| diff to current
2005-05-25	jprocter	tidied up system.out messages and moved many to stderr.	blob \| commitdiff \| diff to current
2005-05-23	amwaterhouse	historyitem added	blob \| commitdiff \| diff to current
2005-05-20	amwaterhouse	if fullid shown, resize fonts	blob \| commitdiff \| diff to current
2005-05-20	amwaterhouse	copy order maintained	blob \| commitdiff \| diff to current
2005-05-19	amwaterhouse	Copied sequences title altered	blob \| commitdiff \| diff to current
2005-05-11	amwaterhouse	reads in treeFile from applet parameter	blob \| commitdiff \| diff to current
2005-05-04	amwaterhouse	Applet files	blob \| commitdiff \| diff to current

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