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JAL-3446 JAL-3253 JAL-3445 BSML bbb XML format reader (preliminary) test
[jalview.git] / src /
2020-06-02 BobHansonJAL-3446 JAL-3253 JAL-3445 BSML bbb XML format reader... tree | commitdiff
2020-06-02 BobHansonJAL-3446 JAL-3253 Preferences tree | commitdiff
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet StockholmFile updated... tree | commitdiff
2020-06-02 gmungocJAL-3446 fix broken test tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Jalview.java tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Cache applicationProperti... tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet web page embedding tree | commitdiff
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet JalviewLite scrollTo... tree | commitdiff
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet CalculationChooser tree | commitdiff
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet StructureViewer/Chooser tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet temp. Desktop instance... tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet JalviewApp integration tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet JalviewApp integration tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet AppletParams + Cache... tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet ArgsParser tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet Platform JS interface... tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet Preferences final static... tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3523-applet JalviewApp and JalviewJSApi tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL3253-applet core_jvjmol.z.js static... tree | commitdiff
2020-06-01 BobHansonJAL-3626 Regex optimization from JAL-3253-applet; also... tree | commitdiff
2020-06-01 BobHansoncorrects Platform.openURL tree | commitdiff
2020-06-01 BobHansonJAL-3626 adding compatible Platform.java tree | commitdiff
2020-06-01 BobHansonSwingJS update tree | commitdiff
2020-06-01 BobHansonMerge branch 'Jalview-JS/develop' of https://source... tree | commitdiff
2020-06-01 BobHansonswingjs/api, javajs/async tree | commitdiff
2020-05-28 soaresMerge branch 'Jalview-JS/develop' of https://source... tree | commitdiff
2020-05-28 BobHansonJAL-3636 ColorUtils cleaner test for hex color tree | commitdiff
2020-05-28 soaresMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-05-28 BobHansonGitter comment 2020.05.28 Cache.log.err(msg) not appearing tree | commitdiff
2020-05-28 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS tree | commitdiff
2020-05-28 gmungocJAL-3624 use temp file for SIFT download in JS, correct... tree | commitdiff
2020-05-28 gmungocJAL-3624 log when SIFTS mapping fails tree | commitdiff
2020-05-26 gmungocJAL-3624 log when SIFTS mapping fails tree | commitdiff
2020-05-26 gmungocMerge branch 'feature/JAL-3624siftsInJS' into develop tree | commitdiff
2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test tree | commitdiff
2020-05-19 gmungocJAL-3624 use temp file for SIFT download in JS, correct... feature/JAL-3624siftsInJS tree | commitdiff
2020-05-18 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS tree | commitdiff
2020-05-18 gmungocJAL-3621 update to intervalstore v1.1 tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-05-18 gmungocJAL-3613 remove debug code committed in error tree | commitdiff
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... tree | commitdiff
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates... tree | commitdiff
2020-04-21 Jim ProcterJAL-367 code tidy tree | commitdiff
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide tree | commitdiff
2020-04-21 gmungocJAL-3603 load annotation file from RELATIVE_URL in... tree | commitdiff
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips tree | commitdiff
2020-04-16 BobHansonJAL-3587 Load Project bug tree | commitdiff
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit... tree | commitdiff
2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein conseque... tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... tree | commitdiff
2020-04-14 gmungocJAL-3583 remove debug logging, Javadoc added tree | commitdiff
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... tree | commitdiff
2020-04-12 gmungocJAL-3596 change redacted tree | commitdiff
2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text... tree | commitdiff
2020-04-12 gmungocJAL-3583 consistent last[Formatted]Tooltip, show once... tree | commitdiff
2020-04-08 BobHansonJAL-3253 merge of new SwingJS api tree | commitdiff
2020-04-07 soaresmerge from develop: Most of the changes tree | commitdiff
2020-04-07 BobHansonJAL-3589 (old Platform) fix for Jalvew-JS/develop only. tree | commitdiff
2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore... tree | commitdiff
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference tree | commitdiff
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... tree | commitdiff
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... tree | commitdiff
2020-04-06 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown tree | commitdiff
2020-03-31 gmungocJAL-3210 JAL-3130 merge changes to JSON processing tree | commitdiff
2020-03-31 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-30 Jim ProcterJAL-3407 JAL-3130 back out java 9+ syntax that breaks... tree | commitdiff
2020-03-30 gmungocJAL-3210 debug logging commented out tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-20 Jim ProcterJAL-3549 javadoc tree | commitdiff
2020-03-19 gmungocJAL-3305 don't propagate an empty SelectionGroup to... tree | commitdiff
2020-03-16 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... tree | commitdiff
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc tree | commitdiff
2020-03-09 gmungocJAL-3549 JAL-3305 no Sort By Score / Density if no... tree | commitdiff
2020-03-09 gmungocJAL-3412 update layout whenever desired id width changes testbuild/JAL-3412_getIdWidth_test tree | commitdiff
2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue tree | commitdiff
2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsi... tree | commitdiff
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis tree | commitdiff
2020-03-05 Jim ProcterMerge branch 'improvement/JAL-3543_dont_report_null_ver... tree | commitdiff
2020-03-04 Ben SoaresJAL-3468 small tidy tree | commitdiff
2020-03-04 Ben SoaresJAL-3468 improvement to feature description truncation... tree | commitdiff
2020-03-04 Ben SoaresJAL-3468 Obsessively fixed self-closing <br/> tags tree | commitdiff
2020-03-03 soaresJAL-3468 Adapted methods to report how many features... tree | commitdiff
2020-03-02 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous... tree | commitdiff
2020-02-27 Ben SoaresJAL-3543 remove debugging output improvement/JAL-3543_dont_report_null_versions_in_java_console tree | commitdiff
2020-02-27 Ben SoaresMerge branch 'develop' into improvement/JAL-3543_dont_r... tree | commitdiff
2020-02-27 Ben SoaresJAL-3543 Conditional reporting of Install4j and Getdown... tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into... bug/JAL-3412idWidthDiscrepancy tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3296changeStartInvalidateCursor... tree | commitdiff
2020-02-26 Jim ProcterMerge branch 'bug/JAL-3477_memory_max_allocation' into... tree | commitdiff
2020-02-26 Jim ProcterMerge branch 'improvement/JAL-3449_add_install4j_instal... tree | commitdiff
2020-02-21 Jim ProcterMerge branch 'bug/JAL-3536getCrossrefTwice' into develop tree | commitdiff
2020-02-21 Jim ProcterJAL-3186 ensure transparency slider position is updated... tree | commitdiff
2020-02-21 Jim ProcterJAL-3186 avoid repainting twice in splitframe tree | commitdiff
2020-02-21 Jim ProcterMerge branch 'develop' into features/JAL-3187_uitweaks tree | commitdiff
2020-02-20 Jim ProcterJAL-3187 nice to have enabling/disabling of apply/cance... features/JAL-3187_uitweaks tree | commitdiff
2020-02-20 Jim ProcterJAL-3187 use the recommended way of catching tab select... tree | commitdiff
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