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JAL-2576 Proposed fix
[jalview.git] / src /
2017-06-02 kiramtJAL-2576 Proposed fix bug/JAL-2576 tree | commitdiff
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2034contextchange' into develop tree | commitdiff
2017-05-29 Jim ProcterMerge branch 'features/JAL-2465_No-mapping_Jmol-structu... tree | commitdiff
2017-05-29 Jim ProcterJAL-2533 update javadoc features/JAL-2465_No-mapping_Jmol-structures-loaded-via-url tree | commitdiff
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2536' into develop tree | commitdiff
2017-05-29 Jim ProcterJAL-2536 tweak javadoc wording tree | commitdiff
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2517cancelAppletColour' into... tree | commitdiff
2017-05-27 Jim ProcterMerge branch 'bug/JAL-2491' into develop tree | commitdiff
2017-05-27 Jim ProcterMerge branch 'bug/JAL-2547tooltipOnGap' into develop tree | commitdiff
2017-05-27 Jim ProcterJAL-2526 test and documentation for SeqPanel.setStatus... tree | commitdiff
2017-05-27 Jim ProcterJAL-2562 javadoc TODO tree | commitdiff
2017-05-26 kiramtJAL-2491 Missed port to applet from JAL-1691 bug/JAL-2491 tree | commitdiff
2017-05-26 tcofoegbuJAL-2465 Improvement to re-instate storing recently... tree | commitdiff
2017-05-26 tcofoegbuJAL-2465 fix to prevent files loaded from the system... tree | commitdiff
2017-05-25 kiramtJAl-2034 Ported to applet bug/JAL-2034contextchange tree | commitdiff
2017-05-25 kiramtJAL-2034 don't update overview after click without... tree | commitdiff
2017-05-25 kiramtMerge branch 'bug/JAL-2551' into bug/JAL-2034contextchange tree | commitdiff
2017-05-24 kiramtJAL-2551 Fix to group colouring when group extent is... bug/JAL-2551 tree | commitdiff
2017-05-24 kiramtJAL-2034 Added isDefined flag to SequenceGroup tree | commitdiff
2017-05-23 Jim ProcterJAL-2549 replace JABAWS 2.1 with 2.2 client and remove... tree | commitdiff
2017-05-23 gmungocJAL-2547 don't show features in tooltip over a gap bug/JAL-2547tooltipOnGap tree | commitdiff
2017-05-22 gmungocJAL-2504 update the right feature colour when creating... bug/JAL-2510amendFeatures tree | commitdiff
2017-05-22 gmungocJAL-2544 check feature overlaps selection region tree | commitdiff
2017-05-22 kiramtMerge remote-tracking branch 'origin/bug/JAL-2256'... tree | commitdiff
2017-05-22 Jim ProcterJAL-2418 patch build - broken htsjdk import tree | commitdiff
2017-05-19 gmungocJAL-2526 removed redundant call to Sequence.findPosition() tree | commitdiff
2017-05-18 Jim ProcterJAL-2388 return empty hidden columns for fully visible... tree | commitdiff
2017-05-18 kiramtJAL-2256 Corrected AllCols/Rows iterator behaviour... bug/JAL-2256 tree | commitdiff
2017-05-17 Jim ProcterMerge branch 'bug/JAL-2510amendFeatures' into develop tree | commitdiff
2017-05-17 Jim ProcterMerge branch 'features/JAL-2447experimentalFlag' into... tree | commitdiff
2017-05-17 gmungocJAL-2504 use (and update) defaults for new feature... tree | commitdiff
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures tree | commitdiff
2017-05-16 kiramtJAL-2536 Overview window sizing not subject to min... bug/JAL-2536 tree | commitdiff
2017-05-16 gmungocJAL-2517 restore complex colour scheme on Cancel in... bug/JAL-2517cancelAppletColour tree | commitdiff
2017-05-16 gmungocJAL-2403 simplify instantiation / configuration of... tree | commitdiff
2017-05-16 kiramtJAL-2522 Missed fix to applet tree | commitdiff
2017-05-16 kiramtJAL-2388 Rationalised hashCode method in HiddenColumns tree | commitdiff
2017-05-16 kiramtMerge branch 'develop' into bug/JAL-2491 tree | commitdiff
2017-05-16 kiramtJAL-2491 Better merge tree | commitdiff
2017-05-15 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into... tree | commitdiff
2017-05-15 Jim ProcterJAL-2507 capitalisation for annotation lines generated... tree | commitdiff
2017-05-15 Jim ProcterJAL-2507 case insensitive recognition of annotation... tree | commitdiff
2017-05-15 gmungocJAL-2532 new feature types and colour changes from... tree | commitdiff
2017-05-15 Jim ProcterJAL-2535 quick hack to implement posterior probabilitie... tree | commitdiff
2017-05-15 tcofoegbuJAL-2520 improvement to use URL leaf name for creating... tree | commitdiff
2017-05-15 tcofoegbuJAL-2533 improvement to prune off file extension when... tree | commitdiff
2017-05-15 kiramtMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-15 kiramtJAL-2388 Add missed optimisation tree | commitdiff
2017-05-15 kiramtJAL-2491 Better merge but not quite right yet tree | commitdiff
2017-05-15 Jim ProcterMerge branch 'features/JAL-2376_add-horizontal-bar... tree | commitdiff
2017-05-15 Jim ProcterJAL-2371 create a default ResidueShader when constructi... tree | commitdiff
2017-05-15 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-05-15 kiramtJAL-2491 Tidies tree | commitdiff
2017-05-12 kiramtJAL-2491 Tidy tree | commitdiff
2017-05-12 kiramtJAL-2491 Tidies to Overview panel calls in light of... tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into... tree | commitdiff
2017-05-12 Jim ProcterJAL-2435 mirror antiAlias setting between cDNA and... tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into... tree | commitdiff
2017-05-12 Jim ProcterJAL-2388 checkbox in overview popup for applet tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2228_efficient_featurecounts... tree | commitdiff
2017-05-12 kiramtJAL-2491 Renamed comp scrolling flag for consistency... tree | commitdiff
2017-05-12 kiramtJAL-2491 Added adjustment methods to be called directly tree | commitdiff
2017-05-12 kiramtJAL-2491 Unit test updates tree | commitdiff
2017-05-12 kiramtJAL-2491 Tweaks for applet tree | commitdiff
2017-05-11 kiramtJAL-2491 First port to applet tree | commitdiff
2017-05-11 kiramtJAL-2491 First port to applet tree | commitdiff
2017-05-11 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into... tree | commitdiff
2017-05-11 Jim ProcterJAL-2509 JAL-2507 allow whitespace in GS annotation... tree | commitdiff
2017-05-11 Jim ProcterJAL-2507 test if an annotation is ‘whitespace’ tree | commitdiff
2017-05-11 Jim ProcterJAL-2507 Annotation.EMPTY_ANNOTATION - non-null whitesp... tree | commitdiff
2017-05-11 kiramtJAL-2491 Unit tests and updates tree | commitdiff
2017-05-10 kiramtJAL-2491 Make it work with cursor movement tree | commitdiff
2017-05-10 kiramtMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-10 kiramtJAL-2522 Fix to cursor scrolling tree | commitdiff
2017-05-10 kiramtJAL-2491 Cursor scrolling tree | commitdiff
2017-05-09 Jim ProcterJAL-2509 extend set of brackets recognised by stockholm... tree | commitdiff
2017-05-09 tcofoegbuJAL-2520 improvement to download and update structure... tree | commitdiff
2017-05-09 Jim ProcterJAL-2507 unpaired RNA marked as ‘ ‘ in Stockholm SS... tree | commitdiff
2017-05-09 Jim ProcterJAL-2507 output secondary structure regardless of prese... tree | commitdiff
2017-05-09 kiramtJAL-2491 Tidies and more refactoring tree | commitdiff
2017-05-09 kiramtJAL-2491 Resolved highlighting and initialisation problems tree | commitdiff
2017-05-09 tcofoegbuJAL-2465 fix to dynamically specify data source type... tree | commitdiff
2017-05-09 gmungocJAL-1632 correct i18n and NPE tree | commitdiff
2017-05-09 kiramtJAL-2388 Added checkbox to toggle hidden columns menu... tree | commitdiff
2017-05-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-08 kiramtJAL-2491 More wrap corrections tree | commitdiff
2017-05-08 gmungocJAL-1632 i18n for warning messages tree | commitdiff
2017-05-08 gmungocMerge remote-tracking branch 'origin/bug/JAL-2515'... tree | commitdiff
2017-05-08 kiramtJAL-2491 Tweaks to avoid scroll problems at bottom... tree | commitdiff
2017-05-08 kiramtJAL-2515 Id panel in applet updated for NPE on urlProvider bug/JAL-2515 tree | commitdiff
2017-05-08 kiramtJAL-2512 And applet tree | commitdiff
2017-05-08 kiramtJAL-2512 Fix to show non-gap positions in None colour... tree | commitdiff
2017-05-08 kiramtJAL-2491 Started moving other scrolling fns into viewpo... tree | commitdiff
2017-05-05 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-05-05 gmungocJAL-964 JAL-2510 update Feature Settings from Amend... tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch tree | commitdiff
2017-05-05 kiramtJAL-2491 Scrolling and interaction with overview/find... tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-05-05 kiramtJAL-2491 More working split panel + new scrolling tree | commitdiff
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