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2015-08-03 Jim ProcterJAL-1821 JAL-1759 reinstate rotation speed configuratio... tree | commitdiff
2015-08-03 Jim ProcterJAL-1821 JAL-1759 updated Jmol has different model... tree | commitdiff
2015-08-03 Jim ProcterJAL-1821 avoid race condition when multiple structures... tree | commitdiff
2015-07-30 tcofoegbuJAL-1443 modified exception notifications tree | commitdiff
2015-07-30 tcofoegbuJAL-1710 filtered colons(:) from structure chooser... tree | commitdiff
2015-07-29 tcofoegbuJAL-1821 discarded sequence name truncation in summary... tree | commitdiff
2015-07-23 Jim ProcterMerge branch 'features/JAL-1759jmolUpdate' into develop tree | commitdiff
2015-07-23 Jim ProcterJAL-1759 formatting
 tree | commitdiff
2015-07-23 Jim ProcterJAL-1759 reinstate changes from bdfde6ef989da0702cef90f... tree | commitdiff
2015-07-23 Jim ProcterJAL-1759 formatting tree | commitdiff
2015-07-23 tcofoegbuResolved merge conflict in EdtiCommandTest.java tree | commitdiff
2015-07-23 tcofoegbuJAL-1805 modified test setup's so the are ran for group... tree | commitdiff
2015-07-23 tcofoegbuJAL-1819 Test cases for Identify file tree | commitdiff
2015-07-23 Jim ProcterMerge branch 'bug/JAL-1819_isNaN' into develop tree | commitdiff
2015-07-23 Jim ProcterJAL-1819 commented out debugging message to stderr bug/JAL-1819_isNaN tree | commitdiff
2015-07-23 Jim ProcterJAL-1551 JAL-1819 formatting/imports tree | commitdiff
2015-07-23 Jim ProcterJAL-1819 use Float.isNaN() to check for NaNs! tree | commitdiff
2015-07-21 tcofoegbuMerge tree | commitdiff
2015-07-21 tcofoegbuJAL-1443 bugfix to prevent loading of unidentifiable... tree | commitdiff
2015-07-21 Jim ProcterMerge branch 'ismb/2015_demo' into develop tree | commitdiff
2015-07-16 Jim Procterrevision for JAL-1749 - ensure view 2D structure menu... tree | commitdiff
2015-07-15 gmungocJAL-1813 only pair up A-Z with a-z if annotation is RNA tree | commitdiff
2015-07-13 tcofoegbuJAL-1788 added help documentation for biojson tree | commitdiff
2015-07-10 tcofoegbuJAL-1759 code fix to enable testng ant task compile... tree | commitdiff
2015-07-09 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-07-09 tcofoegbuJAL-1806 bug fix to loop through the entire data file... tree | commitdiff
2015-07-09 tcofoegbuJAL-1769 added test for commandline input operations tree | commitdiff
2015-07-08 gmungocJAL-1759 merge from develop tree | commitdiff
2015-07-08 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-07-08 gmungocJAL-1598 replaced faulty regex, amended Varna call... tree | commitdiff
2015-07-07 tcofoegbuJAL-1769 fixed output to jalview (.jpv) file in headles... tree | commitdiff
2015-07-07 tcofoegbuJAL-1805 test envirionment separation tree | commitdiff
2015-07-06 tcofoegbuMerge branch 'features/1769_headless-mode-test' into... tree | commitdiff
2015-07-06 tcofoegbuJAL-1769 fixed headless execution mode and created... tree | commitdiff
2015-07-06 gmungocJAL-1421 generics used for leaner safer code tree | commitdiff
2015-07-06 gmungocJAL-1799 tweaked calculation for applet, now showing... tree | commitdiff
2015-07-06 gmungocJAL-1799 equivalent logic in applet tree | commitdiff
2015-07-03 gmungocMerge branch 'develop' into features/JAL-892varnaToProject tree | commitdiff
2015-07-03 gmungocJAL-892 1 second delay for correct initial rendering... tree | commitdiff
2015-07-02 tcofoegbuMerge branch 'bug/JAL-1443_loading-empty-file' into... tree | commitdiff
2015-07-02 tcofoegbuJAL-1443 data validation for empty content before loadi... tree | commitdiff
2015-07-02 gmungocJAL-1677 check all response lines when parsing REST... tree | commitdiff
2015-07-01 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-07-01 gmungocJAL-1681 more condensed tooltip where codons share... tree | commitdiff
2015-07-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-07-01 tcofoegbuhouse keeping tree | commitdiff
2015-07-01 gmungocJAL-1802 explanatory comment added tree | commitdiff
2015-07-01 gmungocJAL-1802 handle slide sequences edits in split frame... tree | commitdiff
2015-07-01 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate tree | commitdiff
2015-07-01 gmungocJAL-1799 deduct more space for decorators on Windows tree | commitdiff
2015-07-01 gmungocJAL-1619 align the added sequences to match what they... tree | commitdiff
2015-06-30 gmungocJAL=1759 fix Jmol state command bug; remove debug output tree | commitdiff
2015-06-30 gmungocJAL-1759 unused JmolPopup removed, code tidy for generics tree | commitdiff
2015-06-30 gmungocJAL-1759 deprecated EnfinEnvision2OneWay removed tree | commitdiff
2015-06-30 gmungocJAL-1759 JMol now Jmol ! tree | commitdiff
2015-06-30 gmungocJAL-1759 unused field / methods removed tree | commitdiff
2015-06-30 tcofoegbuMerge branch 'features/JAL-1641_JSON-tests-and-docs... tree | commitdiff
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring tree | commitdiff
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even... tree | commitdiff
2015-06-30 Jim ProcterJAL-1682 JAL-1645 remove references to 2.8.3 tree | commitdiff
2015-06-29 gmungocJAL-1799 adjusted annotation height calculation tree | commitdiff
2015-06-29 gmungocJAL-1759 correct conversion of Jmol Chain.chainId ... tree | commitdiff
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor tree | commitdiff
2015-06-26 gmungocMerge branch 'develop' into features/JAL-892varnaToProject tree | commitdiff
2015-06-26 gmungocJAL-1759 changed to non-deprecated Viewer.renderScreenI... tree | commitdiff
2015-06-26 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate tree | commitdiff
2015-06-26 gmungocJAL-1759 updates for Jmol 14.2.14_25.06.11 tree | commitdiff
2015-06-26 tcofoegbumerge tree | commitdiff
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog... tree | commitdiff
2015-06-25 Jim ProcterJAL-1691 avoid NPE when original split frame has been... tree | commitdiff
2015-06-25 Jim ProcterJAL-1780 JAL-653 JAL-1892 brackets in wrong place broke... tree | commitdiff
2015-06-24 Jim ProcterMerge branch 'features/JAL-1370_patchshowunconserved... tree | commitdiff
2015-06-24 Jim ProcterJAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation tree | commitdiff
2015-06-23 Jim ProcterJAL-1780 JAL-653 jim forgot to put the conditional... merge/develop_JAL-1780_JAL-653_JAL-1892 tree | commitdiff
2015-06-23 Jim ProcterJAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac... tree | commitdiff
2015-06-22 Jim ProcterJAL-653 JAL-1780 dropped unnecessary refs tree | commitdiff
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export... tree | commitdiff
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports tree | commitdiff
2015-06-22 gmungocJAL-892 tidy Varna panel names; JAL-1789 simplified... tree | commitdiff
2015-06-19 Jim ProcterJAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfil... tree | commitdiff
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports tree | commitdiff
2015-06-19 gmungocJAL-892 check viewer is linked to alignment panel on... tree | commitdiff
2015-06-19 Jim ProcterJAL-653 JAL-1780 minimise call rate now av.hasHiddenRow... tree | commitdiff
2015-06-19 Jim ProcterJAL-653 JAL-1780 dropped av.setHasHiddenRows() and... tree | commitdiff
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports tree | commitdiff
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring tree | commitdiff
2015-06-18 Jim ProcterJAL-653 JAL-1780 JAL-1543 javadoc and comment about... tree | commitdiff
2015-06-18 Jim ProcterJAL-653 JAL-1780 javadoc for FeatureRenderer prior... tree | commitdiff
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference... tree | commitdiff
2015-06-18 gmungocJAL-1544 typos in comments tree | commitdiff
2015-06-18 gmungocJAL-892 JAL-1779 save/restore Varna viewer to/from... tree | commitdiff
2015-06-18 gmungocJAL-1695 default ENABLE_SPLIT_FRAME to true for desktop tree | commitdiff
2015-06-18 gmungocJAL-892 schema changes (rnaViewer) for save Varna to... tree | commitdiff
2015-06-18 gmungocJAL-1781 annotation.sequenceRef now sequence id not... features/JAL-1781annotationXmlIds tree | commitdiff
2015-06-17 Jim ProcterJAL-1784 minimise data duplication, and report out... tree | commitdiff
2015-06-17 Jim ProcterJAL-1784 refactor parse method to directly parse FilePa... tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into... tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export... tree | commitdiff
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile tree | commitdiff
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