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JAL-2907 test method renamed to match method name change
[jalview.git] / test /
2019-03-05 gmungocJAL-2907 test method renamed to match method name change bug/JAL-2907stockholmGapChar tree | commitdiff
2018-02-26 gmungocJAL-2907 read/write underscore for annotation at gap... tree | commitdiff
2018-02-20 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-02-20 gmungocJAL-2897 updated unit test for code change features/JAL-1793VCF tree | commitdiff
2018-02-13 Jim ProcterJAL-2780 scan all test IDs before testing and reporting... bugs/JAL-2780_JAL-2781_pdbnegativenums tree | commitdiff
2018-02-13 Jim ProcterJAL-2780 SequenceI.findFeatures takes column numbers... tree | commitdiff
2018-02-13 Jim ProcterJAL-2781 ensure Trim is disabled before test starts tree | commitdiff
2018-02-13 Jim ProcterJAL-2781 report exactly which residues do not receive... tree | commitdiff
2018-02-12 Jim ProcterJAL-2780 JAL-2781 extra column in mapping array tree | commitdiff
2018-02-12 Jim ProcterJAL-2904 JAL-2780 JAL-2781 update JmolCommandsTest... tree | commitdiff
2018-02-12 Jim ProcterJAL-2780 use value of ’UNASSIGNED’ constant in assert... tree | commitdiff
2018-02-12 Jim ProcterJAL-2904 replaced assert for (getEnd()-getStart()+1... tree | commitdiff
2018-02-11 Jim ProcterJAL-2781 fix test data for full length annotation tree | commitdiff
2018-02-07 Jim ProcterJAL-2780 JAL-2781 run sequentially and ensure windows... tree | commitdiff
2018-02-07 Jim ProcterJAL-2780 JAL-2891 clear all windows always beforeTest... tree | commitdiff
2018-02-07 Jim ProcterJAL-2780 JAL-2781 first pass at failing test for incorr... tree | commitdiff
2018-02-07 Jim ProcterJAL-2780 JAL-2781 JAL-2902 refactored helper method... tree | commitdiff
2018-02-05 Jim ProcterJAL-2780 JAL-2781 (failing) test comparing location... tree | commitdiff
2018-02-05 Jim ProcterJAL-2780 JAL-2781 test AlignmentI.findAnnotations locat... tree | commitdiff
2018-02-05 Jim ProcterJAL-2780 JAL-2781 - patch and first test for AlignmentI... tree | commitdiff
2018-02-05 gmungocJAL-2897 more informative description on synonymous... tree | commitdiff
2018-02-05 gmungocJAL-2897 more informative description on synonymous... tree | commitdiff
2018-02-05 gmungocMerge branch 'spikes/mungo' into trialMerge tree | commitdiff
2018-02-05 gmungocJAL-2897 more informative description on synonymous... tree | commitdiff
2018-01-30 gmungocJAL-1793 update spike build to latest incl stop and... tree | commitdiff
2018-01-30 gmungocJAL-2898 show 'stop_gained' variants on peptide sequences tree | commitdiff
2018-01-30 gmungocJAL-2897 generate peptide variants for synonymous codon... tree | commitdiff
2018-01-26 Jim ProcterMerge branch 'releases/Release_2_10_3_Branch' into... tree | commitdiff
2018-01-26 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2018-01-17 gmungocJAL-2679 case-insensitive comparison of query and retri... tree | commitdiff
2018-01-12 kiramtJAL-2886 trivial unit test fix tree | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest tree | commitdiff
2018-01-10 gmungocJAL-2791 ignore feature type visibility in getColor() tree | commitdiff
2018-01-09 gmungocJAL-2843 test roundtrip of feature colours and filters... tree | commitdiff
2018-01-09 gmungocJAL-2843 unit tests for writing filters to Jalview... tree | commitdiff
2018-01-09 gmungocJAL-2843 unit tests for Save/Load colours and filters... tree | commitdiff
2018-01-09 gmungocJAL-2808 small tweaks to api / Javadoc tree | commitdiff
2017-12-19 Jim ProcterJAL-2880 disabled non-functional test - Jmol parser... tree | commitdiff
2017-12-13 gmungocJAL-2843 add isByAttribute to interface for convenience tree | commitdiff
2017-12-11 gmungocJAL-2843 add colour by attribute, and no value colour... tree | commitdiff
2017-12-08 gmungocJAL-2843 read/write feature filters from/to Jalview... tree | commitdiff
2017-12-08 gmungocJAL-2843 toStableString, fromString for Jalview feature... tree | commitdiff
2017-12-05 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-12-04 gmungocJAL-2808 JAL-2850 update spike build to latest tree | commitdiff
2017-12-04 gmungocMerge branch 'spikes/mungo' into features/JAL-1793VCF tree | commitdiff
2017-12-04 gmungocJAL-2850 JAL-1766 option to load contig sequence refere... tree | commitdiff
2017-12-04 gmungocJAL-2845 locate reverse strand insertion as complement... tree | commitdiff
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term... tree | commitdiff
2017-12-01 Jim ProcterMerge branch 'develop' into bugs/JAL-2780_JAL-2781_pdbn... tree | commitdiff
2017-12-01 gmungocJAL-2835 additional sub-terms of sequence_variant added tree | commitdiff
2017-11-30 gmungocJAL-1766 additional tests for stub htsjdk wrapper tree | commitdiff
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2859_uniprottowrongpdbid' into... tree | commitdiff
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop tree | commitdiff
2017-11-28 gmungocJAL-2850 MapList.isToForwardStrand added tree | commitdiff
2017-11-27 Jim ProcterJAL-2859 failing test demonstrating sequences with... tree | commitdiff
2017-11-24 gmungocJAL-2808 update spike to latest tree | commitdiff
2017-11-24 gmungocJAL-2808 refine FeatureMatcher interface and matcher... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range tooltip... tree | commitdiff
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present... tree | commitdiff
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options tree | commitdiff
2017-11-23 gmungocJAL-2808 pass FeatureSettings to controller as array... tree | commitdiff
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings) tree | commitdiff
2017-11-22 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-22 gmungocJAL-2808 capture feature attributes datatype (Character... tree | commitdiff
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop tree | commitdiff
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into... tree | commitdiff
2017-11-16 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-16 gmungocJAL-2816 JAL-2835 additional tests to include colour... tree | commitdiff
2017-11-16 gmungocJAL-2835 update test for array-valued attribute name tree | commitdiff
2017-11-16 gmungocJAL-2835 update test for CSQ data held as a Map tree | commitdiff
2017-11-16 gmungocJAL-2835 test updated for colour by 'nested attribute' tree | commitdiff
2017-11-16 gmungocJAL-2816 tests for findFeaturesAtColumn tree | commitdiff
2017-11-15 gmungocJAL-2816 exclude filtered / thresholded out features... tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL-2835 support filter/colour by nested attribute... tree | commitdiff
2017-11-15 gmungocJAL- 2835 support filter on nested attribute keys tree | commitdiff
2017-11-15 gmungocJAL-1270 add missing "Functional" to tests tree | commitdiff
2017-11-14 kiramtJAL-2831 tidies and tests tree | commitdiff
2017-11-14 Jim ProcterJAL-2758 update uniprot retrieval test tree | commitdiff
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831 tree | commitdiff
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into... tree | commitdiff
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps tree | commitdiff
2017-11-10 gmungocJAL-2829 unit tests for failing cases tree | commitdiff
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike with latest tree | commitdiff
2017-11-07 gmungocJAL-2069 corrected overloaded constructor behaviour tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest tree | commitdiff
2017-11-07 gmungocJAL-2069 add attributeName and noValueColour to Feature... tree | commitdiff
2017-11-07 gmungocJAL-2816 tweaks to feature visibility checks tree | commitdiff
2017-11-07 gmungocJAL-2808 tweak to use Iterable for set of matchers tree | commitdiff
2017-11-06 gmungocJAL-2820 include attribute value used for feature colou... tree | commitdiff
2017-11-06 gmungocJAL-2808 small tweak to getString to quote the pattern... tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-11-02 gmungocJAL-2808 toString modified, tests corrected tree | commitdiff
2017-10-31 gmungocMerge branch 'bug/JAL-2791selectVisibleFeatures' into tree | commitdiff
2017-10-31 gmungocJAL-2791 select columns by _visible_ features tree | commitdiff
2017-10-31 gmungocJAL-2808 revised util.matcher package, 2 filter conditi... tree | commitdiff
2017-10-31 gmungocJAL-2792 test updated for 3 column table tree | commitdiff
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