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Merge branch 'spike/JAL-2040_JAL-2137_phyre2' into features/JAL-2040_JAL-2137_phyre2
[jalview.git] / test /
2017-01-19 Jim ProcterMerge branch 'spike/JAL-2040_JAL-2137_phyre2' into... features/JAL-2040_JAL-2137_phyre2 tree | commitdiff
2016-10-27 gmungocJAL-2282 test assertions for 'other' dbsource spikes/geoff spikes/jpred tree | commitdiff
2016-10-27 gmungocJAL-98 refactor bleachColour() to ColorUtils tree | commitdiff
2016-10-26 gmungocMerge branch 'bug/JAL-98consensusMemory' into develop tree | commitdiff
2016-10-26 gmungocJAL-2286 javadoc, refactor, unit tests for threshold... tree | commitdiff
2016-10-25 gmungocJAL-98 minor fixes to / tests for annotation derivation tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-24 Jim ProcterMerge branch 'releases/Release_2_10_0_Branch' tree | commitdiff
2016-10-24 gmungocJAL-98 ResidueCount 100% test coverage (and bug fixes!) tree | commitdiff
2016-10-24 kiramtMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-10-24 kiramtUnit tests for UrlLink bug/JAL-2281JAL-2282 tree | commitdiff
2016-10-24 gmungocJAL-2283 corrected preferences settings for test bug/JAL-2283consColourEnabled tree | commitdiff
2016-10-24 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory tree | commitdiff
2016-10-24 gmungocJAL-2283 set 'by conservation' correctly when changing... tree | commitdiff
2016-10-24 kiramtCode tidy up. Unit test passes. tree | commitdiff
2016-10-21 kiramtCreated (failing) unit test for addFeatureLinks tree | commitdiff
2016-10-19 Jim ProcterJAL-2269 JAL-2195 review and revised test tree | commitdiff
2016-10-14 gmungocMerge branch 'releases/Release_2_10_Branch' into task... task/JAL-2196pdbeProperties tree | commitdiff
2016-10-13 gmungocMerge branch 'releases/Release_2_10_Branch' into develop tree | commitdiff
2016-10-13 gmungocJAL-2044 ensure AAStructureBindingModel.pdbEntry has... tree | commitdiff
2016-10-11 tcofoegbuJAL-2039 improvement to offer cached structure view... features/JAL-2039_Offer_cached_structurefiles_immediately tree | commitdiff
2016-10-10 tcofoegbuJAL-2262 JAL-2195 unit test for bug bug/JAL-2262_dnd-for-local-structure-files tree | commitdiff
2016-10-06 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory tree | commitdiff
2016-10-06 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 apply license tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 format tests tree | commitdiff
2016-10-05 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties tree | commitdiff
2016-10-05 Jim ProcterRevert "JAL-2245 Castor mapping and code changes for... tree | commitdiff
2016-10-04 gmungocMerge branch 'bug/JAL-2245enaXmlChange' into develop tree | commitdiff
2016-10-04 gmungocJAL-2245 Castor mapping and code changes for change... bug/JAL-2245enaXmlChange tree | commitdiff
2016-10-04 gmungocJAL-2232 some fix / partial fix of failing tests bug/JAL-2210_hack_for_Release_2_10 tree | commitdiff
2016-10-04 gmungocJAL-2232 added test that failed before last fix, passes... tree | commitdiff
2016-10-03 gmungocJAL-2110 additional tests for setDatasetSequence, javad... tree | commitdiff
2016-10-03 gmungocJAL-98 throw exception (unhandled) for int overthrow... tree | commitdiff
2016-10-03 gmungocJAL-98 use Profile to store consensus, ResidueCount... tree | commitdiff
2016-10-03 gmungocJAL-98 bespoke fast percentage formatter for consensus... tree | commitdiff
2016-10-02 Jim ProcterJAL-2210 first pass at attempting to fix CrossRef tests... tree | commitdiff
2016-10-01 Jim ProcterMerge branch 'develop' into bug/JAL-2210_ensembl_unipro... tree | commitdiff
2016-09-29 gmungocJAL-2237 apply default filter as sort in initial search tree | commitdiff
2016-09-28 Jim ProcterJAL-2210 patch network test for additional refs tree | commitdiff
2016-09-28 Jim ProcterJAL-2210 JAL-2235 fix deriveSequence test for tightened... tree | commitdiff
2016-09-28 Jim ProcterJAL-1270 read test props before manipulating config... tree | commitdiff
2016-09-28 Jim ProcterJAL-2235 patch tests where self-reference was used... tree | commitdiff
2016-09-28 Jim ProcterJAL-2235 implicit test to check that exception is raise... tree | commitdiff
2016-09-28 Jim ProcterJAL-2232 extract EMBLCDS refs from EMBL refs on Uniprot... tree | commitdiff
2016-09-27 gmungocJAL-2230 JAL-2049 added sequence feature transfer to tree | commitdiff
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176... tree | commitdiff
2016-09-21 Jim ProcterJAL-2214 test for strict Watson-Crick pairing tree | commitdiff
2016-09-20 gmungocJAL-1306 calculate Quality also when Conservation not... tree | commitdiff
2016-09-19 Jim ProcterJAL-2175 JAL-2170 fix sense for assertEquals tree | commitdiff
2016-09-19 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection... tree | commitdiff
2016-09-19 tcofoegbumerge tree | commitdiff
2016-09-19 gmungocJAL-1353 small tidy of test tree | commitdiff
2016-09-19 gmungocJAL-1270 use test properties file tree | commitdiff
2016-09-16 Jim ProcterMerge branch 'patch/JAL-2164_updatesRESNUMtests' into... tree | commitdiff
2016-09-16 gmungocJAL-2157 JAL-1803 refactored Sequence.updatePDBIds... tree | commitdiff
2016-09-16 Jim ProcterJAL-2164 update asserts for padded residue numbers... tree | commitdiff
2016-09-16 gmungocJAL-2164 removed unused parameters from JmolParser... tree | commitdiff
2016-09-16 gmungocJAL-1270 JAL-1919 ensure Temp Factor is OFF for test... tree | commitdiff
2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB... tree | commitdiff
2016-09-13 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-09-13 gmungocJAL-1803 tests added for PDBEntry.Type tree | commitdiff
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser... tree | commitdiff
2016-09-13 gmungocJAL-2196 refactor PDBEntry.getProperty,setProperty... tree | commitdiff
2016-09-13 gmungocJAL-1803 extracted class ChainId to jalview.util.CaseIn... tree | commitdiff
2016-09-09 tcofoegbumerge tree | commitdiff
2016-09-08 tcofoegbuJAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property... tree | commitdiff
2016-09-07 Jim ProcterMerge branch 'develop' into bug/JAL-1803_JAL-2157 tree | commitdiff
2016-09-07 Jim ProcterJAL-2192 TODO tree | commitdiff
2016-09-07 Jim ProcterJAL-2191 comments re chimera view code redundancy and... tree | commitdiff
2016-09-07 Jim ProcterJAL-1803 switched so ‘expected’ is constant in assert tree | commitdiff
2016-09-07 gmungocJAL-2164 fix failing test tree | commitdiff
2016-09-06 gmungocJAL-2106 DBRefEntry.isPrimary() renamed isPrimaryCandid... tree | commitdiff
2016-09-06 gmungocJAL-2147 additional test coverage for findMappingsForSe... tree | commitdiff
2016-09-05 gmungocJAL-2106 increased coverage for testGetPrimaryDbRefs tree | commitdiff
2016-09-05 gmungocJAL-2106 corrections to DBRefEntry.isPrimary code and... tree | commitdiff
2016-09-04 Jim ProcterJAL-1803 JAL-2106 patch tests for tighter PDB Primary... tree | commitdiff
2016-09-04 Jim ProcterJAL-1803 patch test: PDBEntry.getFile() will always... tree | commitdiff
2016-09-01 gmungocJAL-2077 don't mess with the look and feel tree | commitdiff
2016-09-01 gmungocJAL-2077 less drastic exit on close tree | commitdiff
2016-09-01 gmungocJAL-2077 test harness for inspecting mouse events tree | commitdiff
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive... tree | commitdiff
2016-08-30 Jim ProcterJAL-2154 doc & AssertError trap for known failure case... tree | commitdiff
2016-08-30 Jim ProcterJAL-2154 javadoc, fix underloaded version of assertData... tree | commitdiff
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p... tree | commitdiff
2016-08-29 Jim ProcterJAL-2154 endless loop fixed (hopefully :) ) tree | commitdiff
2016-08-29 Jim ProcterJAL-2154 catch insertion of duplicate CDS after retriev... tree | commitdiff
2016-08-29 Jim ProcterJAL-2154 Optional message parameter for assertDatasetNo... tree | commitdiff
2016-08-29 Jim ProcterJAL-2154 new assertDatasetIsNormalised to trivially... tree | commitdiff
2016-08-29 Jim ProcterJAL-2154 additional test that removing a duplicate... tree | commitdiff
2016-08-29 gmungocMerge branch 'bug/JAL-1841rnaSecStr' into develop tree | commitdiff
2016-08-29 gmungocJAL-1448 updated unit test for last change tree | commitdiff
2016-08-29 gmungocJAL-1841 robustness fix bug/JAL-1841rnaSecStr tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 patch regression on DbRefFetcher due to PDB... tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 ENSEMBL and Uniprot tests tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 report any db fetch failures as a fail at end tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 ensure pass increments actually result in... tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 catch and report a failures when xrefed projec... tree | commitdiff
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