JAL-2320 thread to close Chimera viewer panel if Chimera shut down
[jalview.git] / test /
2016-11-08 gmungocJAL-2301 made T hydrophobic as per the cited conservati...
2016-11-08 kiramtJAL-2309 Made test timeout slightly longer bug/JAL-2309
2016-11-08 kiramtJAL-2309 Adjusted timeout on headless tests
2016-11-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-08 tcofoegbuJAL-2292 renamed method and improved implementation...
2016-11-07 gmungocJAL-1270 renamed helper method so it is not run as...
2016-11-07 gmungocJAL-2272 another test case
2016-11-07 gmungocJAL-1805 groups=Functional added where missing
2016-11-07 gmungocJAL-2272 unit tests added for Platform.isControlDown
2016-11-04 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-04 tcofoegbuJAL-2292 Unit test for utility method for comparing...
2016-11-03 kiramtJAL-2282 Link menu disabled if there are no valid links
2016-11-03 kiramtJAL-2281 Back out unit test update, as Mungo already...
2016-11-03 kiramtMerge remote-tracking branch 'origin/develop' into...
2016-11-03 kiramtJAL-2308 Fixed hiddenColsTest bug/JAL-2308
2016-11-03 tcofoegbuJAL-2312 unit test for bug fix - repeated mapping gener...
2016-11-03 gmungocJAL-2281 test added to show searchRefs is now not case...
2016-11-03 kiramtJAL-2281 Minor unit test addition
2016-11-02 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-02 kiramtJAL-2281 Unit test updates
2016-11-02 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-02 gmungocJAL-98 JAL-1854 encapsulate 'magic number' threshold...
2016-11-02 gmungocJAL-98 ProfileI interface for Profile
2016-11-02 gmungocJAL-98 test updated for percentage rounded
2016-11-02 gmungocJAL-98 Profile and ResidueCount moved from analysis...
2016-11-02 kiramtJAL-2282 Renamed internal use of sequence id / db acces...
2016-11-02 kiramtJAL-2282 URLLink unit tests updated
2016-11-01 gmungocConservation now using ResidueCount; tests added
2016-11-01 gmungocJAL-98 use Integer constants; tests added for propHash...
2016-11-01 gmungocJAL-98 simplified repeat() method
2016-10-31 gmungocJAL-98 round when formatting dec places
2016-10-31 kiramtUse ACCESSION_ID for database accession id, and SEQUENC...
2016-10-27 gmungocJAL-2282 test assertions for 'other' dbsource spikes/geoff spikes/jpred
2016-10-27 gmungocJAL-98 refactor bleachColour() to ColorUtils
2016-10-26 gmungocMerge branch 'bug/JAL-98consensusMemory' into develop
2016-10-26 gmungocJAL-2286 javadoc, refactor, unit tests for threshold...
2016-10-25 gmungocJAL-98 minor fixes to / tests for annotation derivation
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-24 Jim ProcterMerge branch 'releases/Release_2_10_0_Branch'
2016-10-24 gmungocJAL-98 ResidueCount 100% test coverage (and bug fixes!)
2016-10-24 kiramtMerge branch 'develop' of https://source.jalview.org...
2016-10-24 kiramtUnit tests for UrlLink bug/JAL-2281JAL-2282
2016-10-24 gmungocJAL-2283 corrected preferences settings for test bug/JAL-2283consColourEnabled
2016-10-24 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
2016-10-24 gmungocJAL-2283 set 'by conservation' correctly when changing...
2016-10-24 kiramtCode tidy up. Unit test passes.
2016-10-21 kiramtCreated (failing) unit test for addFeatureLinks
2016-10-19 Jim ProcterJAL-2269 JAL-2195 review and revised test
2016-10-14 gmungocMerge branch 'releases/Release_2_10_Branch' into task... task/JAL-2196pdbeProperties
2016-10-13 gmungocMerge branch 'releases/Release_2_10_Branch' into develop
2016-10-13 gmungocJAL-2044 ensure AAStructureBindingModel.pdbEntry has...
2016-10-11 tcofoegbuJAL-2039 improvement to offer cached structure view... features/JAL-2039_Offer_cached_structurefiles_immediately
2016-10-10 tcofoegbuJAL-2262 JAL-2195 unit test for bug bug/JAL-2262_dnd-for-local-structure-files
2016-10-06 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
2016-10-06 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 apply license
2016-10-05 Jim ProcterJAL-2189 format tests
2016-10-05 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
2016-10-05 Jim ProcterRevert "JAL-2245 Castor mapping and code changes for...
2016-10-04 gmungocMerge branch 'bug/JAL-2245enaXmlChange' into develop
2016-10-04 gmungocJAL-2245 Castor mapping and code changes for change... bug/JAL-2245enaXmlChange
2016-10-04 gmungocJAL-2232 some fix / partial fix of failing tests bug/JAL-2210_hack_for_Release_2_10
2016-10-04 gmungocJAL-2232 added test that failed before last fix, passes...
2016-10-03 gmungocJAL-2110 additional tests for setDatasetSequence, javad...
2016-10-03 gmungocJAL-98 throw exception (unhandled) for int overthrow...
2016-10-03 gmungocJAL-98 use Profile to store consensus, ResidueCount...
2016-10-03 gmungocJAL-98 bespoke fast percentage formatter for consensus...
2016-10-02 Jim ProcterJAL-2210 first pass at attempting to fix CrossRef tests...
2016-10-01 Jim ProcterMerge branch 'develop' into bug/JAL-2210_ensembl_unipro...
2016-09-29 gmungocJAL-2237 apply default filter as sort in initial search
2016-09-28 Jim ProcterJAL-2210 patch network test for additional refs
2016-09-28 Jim ProcterJAL-2210 JAL-2235 fix deriveSequence test for tightened...
2016-09-28 Jim ProcterJAL-1270 read test props before manipulating config...
2016-09-28 Jim ProcterJAL-2235 patch tests where self-reference was used...
2016-09-28 Jim ProcterJAL-2235 implicit test to check that exception is raise...
2016-09-28 Jim ProcterJAL-2232 extract EMBLCDS refs from EMBL refs on Uniprot...
2016-09-27 gmungocJAL-2230 JAL-2049 added sequence feature transfer to
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176...
2016-09-21 Jim ProcterJAL-2214 test for strict Watson-Crick pairing
2016-09-20 gmungocJAL-1306 calculate Quality also when Conservation not...
2016-09-19 Jim ProcterJAL-2175 JAL-2170 fix sense for assertEquals
2016-09-19 gmungocMerge branch 'develop' of https://source.jalview.org...
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection...
2016-09-19 tcofoegbumerge
2016-09-19 gmungocJAL-1353 small tidy of test
2016-09-19 gmungocJAL-1270 use test properties file
2016-09-16 Jim ProcterMerge branch 'patch/JAL-2164_updatesRESNUMtests' into...
2016-09-16 gmungocJAL-2157 JAL-1803 refactored Sequence.updatePDBIds...
2016-09-16 Jim ProcterJAL-2164 update asserts for padded residue numbers...
2016-09-16 gmungocJAL-2164 removed unused parameters from JmolParser...
2016-09-16 gmungocJAL-1270 JAL-1919 ensure Temp Factor is OFF for test...
2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB...
2016-09-13 gmungocMerge branch 'develop' of https://source.jalview.org...
2016-09-13 gmungocJAL-1803 tests added for PDBEntry.Type
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser...
2016-09-13 gmungocJAL-2196 refactor PDBEntry.getProperty,setProperty...
2016-09-13 gmungocJAL-1803 extracted class ChainId to jalview.util.CaseIn...
2016-09-09 tcofoegbumerge
2016-09-08 tcofoegbuJAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property...
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