Merge remote-tracking branch 'origin/develop' into
[jalview.git] / test /
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann...
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into...
2017-05-04 Jim ProcterJAL-1656 make RNAML->Stockholm round trip test pass...
2017-05-04 Jim ProcterJAL-2507 JAL-2509 allow differences in visibility of...
2017-05-04 Jim ProcterJAL-2507 JAL-2509 new assert to compare secondary struc...
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann...
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into...
2017-05-03 Jim ProcterJAL-2503 AlignmentAnnotation.isQuantitative() test
2017-05-03 gmungocJAL-2246 basic sanity test of fetching example accessions
2017-05-03 gmungocJAL-2246 test a Uniprot fetch
2017-05-03 gmungocJAL-2485 JAL-2246 test Uniprot FTS summary
2017-05-02 Jim ProcterJAL-2424 fixme’s removed
2017-05-02 Jim ProcterJAL-2424 update assert to correct width for normalising...
2017-05-02 Jim ProcterJAL-2424 resolved, assert updated to pass (1f != 1d)
2017-05-02 Jim ProcterMerge branch 'develop' into features/JAL-2393customMatrices
2017-05-02 Jim ProcterMerge branch 'bug/JAL-2424getVisibleContigs' into develop
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside...
2017-05-02 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-05-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2017-05-01 tcofoegbuJAL-2482 unit test for bug fix
2017-05-01 gmungocJAL-2489 JAL-2371 reinstate calls to
2017-05-01 gmungocMerge remote-tracking branch
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show... features/JAL-1933_occupancy
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show...
2017-04-27 Jim ProcterJAL-1933 don't show occupancy row when testing conserva...
2017-04-27 Jim ProcterJAL-1933 test for SHOW_OCCUPANCY .jalview_properties...
2017-04-27 Jim ProcterJAL-2494 test to cover AnnotatedCollectionI.findAnnotat...
2017-04-26 kiramtJAL-2388 Update to hidden columns/column selection...
2017-04-26 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-04-26 kiramtJAL-2388 last separation of hidden columns/col selection
2017-04-25 tcofoegbuJAL-2489 edited unit test code comment
2017-04-25 tcofoegbuJAL-2489 Unit test for bug
2017-04-24 kiramtJAL-2388 Finished split of hidden columns and selected...
2017-04-24 gmungocJAL-2424 final contig now an inclusive range bug/JAL-2424getVisibleContigs
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection...
2017-04-12 gmungocJAL-2403 ensure array held in Matrix is immutable
2017-04-11 kiramtJAL-2479 Moved some network-dependent unit tests into... bug/JAL-2479unitteststoNetworkGroup
2017-04-11 gmungocJAL-2403 improved ScoreModelI hierarchy as per Kira...
2017-04-10 gmungocJAL-2403 unit tests for PCA.computeSimilarity, signatur...
2017-04-10 gmungocJAL-2416 test updated for reinstatement of '*' row...
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-03 gmungocJAL-2314 made non-test method non-public bug/JAL-2314
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314
2017-03-31 gmungocJAL-2405 additional checks for circular reference in...
2017-03-31 gmungocJAL-2472 PrivilegedAccessor added
2017-03-31 gmungocJAL-2430 code tidy, unit test for Jmol hidden column...
2017-03-30 gmungocJAL-2346 JAL-1933 test updated to include Occupancy
2017-03-30 gmungocJAL-2346 always run setup! bug/JAL-2346annotationChoice
2017-03-30 gmungocJAL-2346 more test coverage for AnnotationColourGradient
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-03-29 gmungocJAL-2416 revert to '*' not '-' in score matrix, handle...
2017-03-28 gmungocJAL-2403 JAL-2416 pairwise score unexpected symbols...
2017-03-28 gmungocJAL-2403 further test coverage for ScoreMatrix, min...
2017-03-28 gmungocJAL-2416 more test coverage of matrix parser
2017-03-27 gmungocJAL-2416 parse score matrices in either NCBI or AAindex...
2017-03-27 gmungocJAL-2416 tidy up after switch from ' ' to '-' in score...
2017-03-27 gmungocJAL-2416 score matrix gap symbol (if any) dynamically...
2017-03-27 gmungocJAL-2416 add score model description field for tooltip...
2017-03-27 gmungocJAL-2416 use '-' not space for gap in score matrices
2017-03-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin...
2017-03-24 gmungocJAL-2416 tests added for ScoreMatrix
2017-03-24 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-03-24 kiramtJAL-2314 Fixes to DisorderAnnotExportImport test
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca...
2017-03-23 kiramtJAL-2388 unit test initialisation fix for running full...
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues
2017-03-23 gmungocJAL-2397 scale PCA by PID to alignment width to match...
2017-03-23 gmungocJAL-2393 updated test for removal of PIDDistanceModel
2017-03-23 kiramtJAL-2314 Re-annotated unit tests using Jws2Discoverer
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into
2017-03-22 gmungocJAL-2311 suppress autocalc'd annotation to isolate...
2017-03-21 kiramtJAL-2307 Fixed SiftsClient unit test
2017-03-21 gmungocJAL-2306 assert no DAS sources
2017-03-21 gmungocJAL-2243 update discovered features on opening structur...
2017-03-21 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into...
2017-03-20 Jim ProcterMerge branch 'bug/JAL-2421overviewboxflicker' into...
2017-03-17 kiramtJAL-2388 ViewportRanges unit test
2017-03-17 kiramtJAL-2437 Synchronization corrections and unit tests
2017-03-17 kiramtJAL-2388 Renamed column and row subtraction functions
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code
2017-03-16 kiramtJAL-2388 Renamed viewport position props to viewport...
2017-03-16 kiramtJAL-2388 Unit test update
2017-03-15 kiramtJAL-2388 Unit tests and tidies
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour
2017-03-15 gmungocJAL-2438 handle null FeatureRenderer in FeatureColourFinder
2017-03-15 gmungocJAL-2438 refactored checks for 'no features displayed'
2017-03-14 kiramtJAL-2388 New hidden cols/seqs functions to support...
2017-03-14 gmungocJAL-2438 unit test, fixes, Javadoc updates
2017-03-14 gmungocJAL-2438 unit tests for FeatureColourFinder (transparen...
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen...
2017-03-10 kiramtJAL-2437 Fixed reordering of sequences when hiding...
2017-03-10 kiramtJAL-2388 Moving some alignment panel logic into overvie...
2017-03-09 kiramtJAL-2388 Minor fix for annotation graph, removed unit...
2017-03-08 gmungocJAL-2430 colour columns hidden in alignment gray on...
2017-03-07 kiramtJAL-2388 Fixed inherited&new out-by-one errors; further...
next