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JAL-2674 Tidies
2017-09-29 kiramtJAL-2674 Tidies
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2017-09-29 kiramtJAL-2674 finish with iterators for now
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2017-09-29 kiramtJAL=2674 Removed getHiddenColumnsCopy
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2017-09-29 kiramtJAL-2674 reverted attempt at visible regions iterator
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2017-09-28 kiramtJAL-2647 more iterators
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2017-09-27 kiramtJAL-2674 Removing most calls to getHiddenColumnsCopy
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2017-09-26 kiramtJAL-2674 tidied up CigarArray
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2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2742'...
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2017-09-26 kiramtJAL-2742 uncomment test
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2017-09-26 kiramtJAL-2674 uncomment test
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2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2742'...
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2017-09-26 kiramtJAL-2742 fixed
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2017-09-26 kiramtJAL-2742 CigarArray constructor unit test
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2017-09-26 kiramtJAL-2674 Changed CigarArray constructor to use HiddenColumns...
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2017-09-26 kiramtJAL-2674 more List<int[]> -> HiddenColumns copy changes
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2017-09-26 kiramtJAL-2674 Unit test for new copy constructor.
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2017-09-26 kiramtJAL-2674 Changes to pasting
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2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2740'...
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2017-09-26 kiramtJAL-2740 additional unit testing
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2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2740'...
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2017-09-26 kiramtJAL-2740 removed unwanted code, added unit test
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2017-09-26 kiramtJAL-2674 HiddenColumns interface tidies
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2017-09-26 kiramtJAL-2647 Added iterators and associated tests and benchmarks
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2017-09-22 kiramtMerge remote-tracking branch 'origin/bug/JAL-2739'...
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2017-09-22 kiramtJAL-2739 Fix ported to 2.10.3
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2017-09-22 kiramtJAL-2674 add bounds to findHiddenRegionPositions
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2017-09-21 kiramtJAL-2674 Made gui ScalePanel reveal menus consistent...
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2017-09-21 kiramtJAL-2674 unit test for gapBitSet
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2017-09-21 kiramtJAL-2674 Rewrote propagateInsertions
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2017-09-21 kiramtJAL-2674 Reset tests
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2017-09-20 kiramtJAL-2674 fix up interface of locateVisibleBoundsOfSequence
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2017-09-20 kiramtJAL-2674 Transferred updated unit tests from first...
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2017-09-20 kiramtJAL-2662 Adjustments to hidden columns benchmark
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2017-09-19 kiramtJAL-2662 Updated README
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2017-09-19 kiramtJAL-2737 Checkstyle error fixes
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2017-09-19 kiramtJAL-2622 Tidied up gitignore, added to README
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2017-09-19 kiramtMerge branch 'develop' of https://source.jalview.org...
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2017-09-19 kiramtMerge remote-tracking branch 'origin/task/JAL-2662...
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2017-09-06 kiramtJAL-2587 Removed dissolve
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2017-09-05 kiramtJAL-2722 unit test
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2017-09-05 kiramtJAL-2722 Reinstate allGroups value setting in getResidueColour
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2017-09-04 kiramtJAL-2673 turn off update to running flag from scrollUp...
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2017-09-04 kiramtJAL-2673 Attempt to stop infinite scrolling etc
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2017-09-04 kiramtJAL-2611 reinstated missed commit
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2017-09-01 kiramtJAL-2527 Additional test
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2017-09-01 kiramtJAL-2527 Unit test for group colouring
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2017-08-31 kiramtJAL-2527 Unit test
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2017-08-31 kiramtJAL-2527 Fix typo
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2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits
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2017-08-31 kiramtJAL-2527 Updates following code review
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2017-08-30 kiramtJAL-2527 Code comments, tidy
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2017-08-30 kiramtJAL-2527 Added default setting/resetting and first...
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2017-08-30 kiramtJAL-2527 Wired up cached values to overview
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2017-08-30 kiramtMerge remote-tracking branch 'origin/feature/2588'...
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2017-08-30 kiramtMerge branch 'feature/JAL-2664' into feature/JAL-2527
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2017-08-29 kiramtJAL-2664 Updates following review
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2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up...
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2017-08-29 kiramtJAL-2665 OOM checks just in case
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2017-08-29 kiramtJAL-2665 OOM checks just in case
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2017-08-29 kiramtJAL-2665 OOM check
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2017-08-29 kiramtJAL-2665 ported fix to 2.10.3. Doesn't work.
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2017-08-29 kiramtJAL-2665 Corrected to draw selections for wrapped printing
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2017-08-28 kiramtJAL-2527 Started adding overview preferences
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2017-08-28 kiramtMerge remote-tracking branch 'origin/develop' into...
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2017-08-28 kiramtMerge remote-tracking branch 'origin/releases/Release_2_10_2...
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2017-08-28 kiramtJAL-2665 Changes for review comments; printing with...
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2017-08-25 kiramtJAL-2587 Removed duplicate events fired to progress bar
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2017-08-25 kiramtJAL-2587 Removed annoying double repaint on hide insertions
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2017-08-25 kiramtJAL-2587 Update overview progress bar while drawing...
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2017-08-25 kiramtJAL-2587 Progress bar sizing tweaks
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2017-08-25 kiramtJAL-2587 Made progress bar display before overview...
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2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into...
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2017-08-18 kiramtJAL-2664 Adjusted colour of hidden cols/seqs
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2017-08-18 kiramtJAL-2664 Correct colouring for rows
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2017-08-18 kiramtJAL-2662 Tidy
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2017-08-18 kiramtMerge branch 'develop' into task/JAL-2662
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2017-08-18 kiramtJAL-2662 First benchmark running
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2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into...
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2017-08-18 kiramtJAL-2665 Comments
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2017-08-18 kiramtJAL-2665 Refactoring (and side-effect fix for JAL-2672)
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2017-08-18 kiramtJAL-2665 tidies
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2017-08-17 kiramtJAL-2665 Code tidies
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2017-08-17 kiramtJAL-2665 Fixed wrapped mode group over >1 panel; and...
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2017-08-17 kiramtJAL-2665 partial fix for selection running over 2 wrapped...
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2017-08-17 kiramtJAL-2665 Correct position of selection switching from...
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2017-08-16 kiramtJAL-2665 Working with hidden columns
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2017-08-16 kiramtJAL-2665 Added hidden columns group selection - almost...
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2017-08-16 kiramtJAL-2665 Selecting on wrapped alignments
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2017-08-16 kiramtJAL-2556 start to account for wrapped alignments
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2017-08-16 kiramtJAL-2665 Tidy
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2017-08-16 kiramtJAL-2665 fix resize
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2017-08-16 kiramtJAL-2556 Code tidy
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2017-08-16 kiramtJAL-2556 Resolved group update on colouring and escape
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2017-08-16 kiramtJAL-2665 Added sequence group update event.
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2017-08-16 kiramtJAL-2665 Draw selection group - works on scroll but...
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2017-08-15 kiramtJAL-2265 turn off NPE
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2017-08-14 kiramtJAL-2664 Initial change to drawing hidden regions in...
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2017-08-11 kiramtJAL-2662 First attempt to set up JMH hidden columns...
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2017-08-10 kiramtMerge remote-tracking branch 'origin/develop' into...
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2017-08-10 kiramtJAL-2587 tidy
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