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JAL-2154 check that xref is a coding xref before adding sequence to retrieved xrefs
2016-08-19 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-08-19 tcofoegbuJAL-1803 unit test for PDB chainCode save/restore from...
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2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
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2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
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2016-08-15 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-08-15 tcofoegbuJAL-1919 Added improvement to ensure consistence of...
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2016-08-08 tcofoegbureplaced broken biojsmsa home link in jalveiw help
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2016-08-01 tcofoegbuJAL-2164 bugfix to convert insCodes of '\000' to '...
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2016-07-29 tcofoegbuJAL-1957 JAL-1479 updated SIFTS user docs
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2016-07-29 tcofoegbuJAL-2157 fixed Jalview2xmlTest
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2016-07-27 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-07-27 tcofoegbuJAL-1919 added codes for End-2-End scan for sequence...
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2016-07-26 tcofoegbuJAL-2157 bugfix for issues from enum refactoring
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2016-07-25 tcofoegbuJAL-2157 bugfix for regression from commit 82a6c8e2e25b75341...
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2016-07-22 tcofoegbuJAL-2148 Bugfix in structureImportSettings string-to...
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2016-07-21 tcofoegbuResolve merge conflict for StructureImportSettings
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2016-07-21 tcofoegbuJAL-2148 fix to heuristically determine chain termination...
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2016-07-19 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-07-19 tcofoegbuJAL-1919 set default structure file format to mmCIF...
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2016-07-14 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-07-14 tcofoegbuJAL-1919 house-keeping
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2016-07-13 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-07-13 tcofoegbuJAL-2135 minor house-keeping
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2016-07-12 tcofoegbuJAL-2135 NPE bugfix when parsing a structure file with...
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2016-07-08 tcofoegbuJAL-1919 Fixed failing tests, enabled HETATM processing...
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2016-07-01 tcofoegbuJAL-2135 bugfix for error preventing processing of...
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2016-06-30 tcofoegbuJAL-2074 Improvement to StructureChooser and FTS interfaces...
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2016-06-30 tcofoegbuJAL-1919 updated PDBSequenceFetcherTest and JMol parser...
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2016-06-29 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-29 tcofoegbuJAL-1479 added test case to elaborate getEntityByMostOptimal...
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2016-06-29 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-29 tcofoegbuJAL-1479 improved Sifts PID calculation for determining...
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2016-06-28 tcofoegbuJAL-1479 minor refactor and housekeeping
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2016-06-28 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-28 tcofoegbuJAL-1479 improved SiftsClient test coverage and implemented...
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2016-06-24 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-24 tcofoegbuJAL-1960 updated unit test to include the test case...
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2016-06-23 tcofoegbuJAL-1996 added notes for an alternative way to view...
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2016-06-22 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-22 tcofoegbuJAL-1996 added link for viewing example source codes...
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2016-06-22 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-22 tcofoegbuJAL-1996 removed quick links in example pages, added...
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2016-06-20 tcofoegbuJAL-1996 added JalviewApplet to download list in applet...
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2016-06-20 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-20 tcofoegbuJAL-1823 Deleted two obsolete methods in PopupMenu...
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2016-06-17 tcofoegbuJAL-1823 Updated tooltip to reflect how a specific...
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2016-06-17 tcofoegbuJAL-1976 clear message if export is cancelled at 'Rendering...
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2016-06-17 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-17 tcofoegbuJAL-1996 update applet deployment note pages
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2016-06-17 tcofoegbuJAL-1976 improved exception handler.
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2016-06-17 tcofoegbuJAL-1976 added an intermediate message between a user...
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2016-06-15 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-15 tcofoegbuJAL-2002 disabled 'Best Uniport Coverage' filter. JAL...
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2016-06-14 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-14 tcofoegbuJAL-2102 right justify 'Mass' in uniprot FTS, and ...
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2016-06-14 tcofoegbuJAL-2047 trapped block that could likely cause ClassCastExce...
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2016-06-14 tcofoegbuJAL-2047 resolved structure chooser's displayed column...
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2016-06-10 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-10 tcofoegbuJAL-1479 updated SIFTS FTP download URL, added improvement...
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2016-06-08 tcofoegbuJAL-1479 JAL- Fix to eradicate duplicate mapping output...
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2016-06-06 tcofoegbuJAL-1919, JAL-1960 fix to disable refetching dbrefs...
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2016-06-06 tcofoegbuJAL-1944 bugfix for wrong alignment numbering when...
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2016-06-02 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-02 tcofoegbuJAL-2020 fix for Jmol choking jalview while loading...
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2016-06-02 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-02 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-02 tcofoegbuJAL-1944 java doc update and minor house keeping
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2016-06-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-06-01 tcofoegbuJAL-1944 updated bugfix implementation
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2016-05-31 tcofoegbumerge
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2016-05-31 tcofoegbuJAL-1563 minor user doc update
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2016-05-31 tcofoegbuJAL-1944 fix for visible seqs sometimes been replaced...
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2016-05-30 tcofoegbuJAL-2038 fix to enable case-insensitive file name ...
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2016-05-27 tcofoegbumerge
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2016-05-27 tcofoegbuJAL-1823 improvement to all chain code specification...
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2016-05-27 tcofoegbuJAL-1911 further improvement to bugfix - do not save...
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2016-05-26 tcofoegbumerge
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2016-05-26 tcofoegbuJAL-1911 improvement to bugfix - do not save i18n text...
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2016-05-26 tcofoegbumerge
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2016-05-26 tcofoegbuJAL-1911 bugfix - do not save i18n text in preference...
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2016-05-26 tcofoegbumerge
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2016-05-26 tcofoegbuJAL-1919 JAL-1479 user help docs
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2016-05-26 tcofoegbumerge
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2016-05-26 tcofoegbuJAL-1911 bugfix - do not save i18n text in preference...
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2016-05-18 tcofoegbumerge
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2016-05-18 tcofoegbuJAL-1563 User documentation for Uniprot FTS
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2016-05-18 tcofoegbuJAL-1563 smarter support for advanced querying of Uniprot FTS
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2016-05-17 tcofoegbuJAL-2106 JAL-1926 updated source doc for set/getSourceDBRef
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2016-05-17 tcofoegbumerge
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2016-05-17 tcofoegbuJAL-1270 Fixed anntatedPDBFileInputTest and updated...
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2016-05-11 tcofoegbuJAL-1563 updated uniprot FTS config file
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2016-05-09 tcofoegbumerge
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2016-05-09 tcofoegbuJAL-2101 JAL-2071 JAL-1563 Added fix to enable searching...
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2016-05-09 tcofoegbuJAL-2102 implemented improvement to round FTS's numberic...
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2016-05-04 tcofoegbumerge
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2016-05-04 tcofoegbuJAL-1563 JAL-2091 Added total result count to Uniprot...
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2016-05-03 tcofoegbuJAL-2091 disable pagination buttons during initialisation
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2016-05-03 tcofoegbuJAL-1563 JAL-2091 Added generic pagination for FTS...
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2016-05-02 tcofoegbuJAL-1563 Fixed Uniprot FTS result-set count error,...
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2016-04-29 tcofoegbumerge
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