| 2017-03-31 |
gmungoc | JAL-2472 PrivilegedAccessor added
|
commit | commitdiff | tree |
| 2017-03-31 |
gmungoc | Merge branch 'develop' into bug/JAL-2431splitFrameNewView
|
commit | commitdiff | tree |
| 2017-03-31 |
gmungoc | JAL-2430 code tidy, unit test for Jmol hidden column...
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-1608 leave Create Group, Remove Group menu items...
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-2401 code and help tidy for review comments
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-2401 don't apply lower case colour to upper case
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2399textColour
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-2346 JAL-1933 test updated to include Occupancy
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-2346 always run setup!
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | JAL-2346 more test coverage for AnnotationColourGradient
|
commit | commitdiff | tree |
| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice
|
commit | commitdiff | tree |
| 2017-03-29 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups
|
commit | commitdiff | tree |
| 2017-03-23 |
gmungoc | JAL-2464 fix cancel tree print behaviour
|
commit | commitdiff | tree |
| 2017-03-22 |
gmungoc | JAL-2311 suppress autocalc'd annotation to isolate...
|
commit | commitdiff | tree |
| 2017-03-21 |
gmungoc | JAL-2306 assert no DAS sources
|
commit | commitdiff | tree |
| 2017-03-21 |
gmungoc | JAL-2438 removed (non-functional) lastSeq, lastSequenceFeatures
|
commit | commitdiff | tree |
| 2017-03-21 |
gmungoc | JAL-2243 update discovered features on opening structure...
|
commit | commitdiff | tree |
| 2017-03-21 |
gmungoc | JAL-2438 check for null FeatureRenderer
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2431 show cDNA consensus after New View in split...
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2438 corrected getFeatureRenderer()
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2442 applet feature transparency also on overview...
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2438 handle null FeatureRenderer in FeatureColourFinder
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2438 refactored checks for 'no features displayed'
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | JAL-2438 clarify code and javadoc, reinstate updateFeatures...
|
commit | commitdiff | tree |
| 2017-03-15 |
gmungoc | Merge branch 'develop' into bug/JAL-2436featureRendererThreading
|
commit | commitdiff | tree |
| 2017-03-14 |
gmungoc | JAL-2438 unit test, fixes, Javadoc updates
|
commit | commitdiff | tree |
| 2017-03-14 |
gmungoc | JAL-2438 unit tests for FeatureColourFinder (transparency...
|
commit | commitdiff | tree |
| 2017-03-14 |
gmungoc | JAL-2438 Javadoc updates
|
commit | commitdiff | tree |
| 2017-03-14 |
gmungoc | JAL-2438 comment/Javadoc tidies
|
commit | commitdiff | tree |
| 2017-03-13 |
gmungoc | JAL-2438 corrected handling of default colour
|
commit | commitdiff | tree |
| 2017-03-13 |
gmungoc | JAL-2438 FeatureColourFinder refactored from FeatureRenderer...
|
commit | commitdiff | tree |
| 2017-03-08 |
gmungoc | JAL-2430 colour columns hidden in alignment gray on...
|
commit | commitdiff | tree |
| 2017-03-08 |
gmungoc | JAL-2295 avoid quotes breaking attribute value parsing
|
commit | commitdiff | tree |
| 2017-03-07 |
gmungoc | JAL-2295 status messages for Chimera attributes set...
|
commit | commitdiff | tree |
| 2017-03-02 |
gmungoc | JAL-2295 tweak order and wording of Superpose menu...
|
commit | commitdiff | tree |
| 2017-03-02 |
gmungoc | JAL-2295 make 'Jmol' menu appear; enable/disable Superpose...
|
commit | commitdiff | tree |
| 2017-03-01 |
gmungoc | JAL-1264 smarter way to skip autocalc'd annotations...
|
commit | commitdiff | tree |
| 2017-03-01 |
gmungoc | Merge branch 'features/JAL-2295setChimeraAttributes...
|
commit | commitdiff | tree |
| 2017-02-14 |
gmungoc | JAL-2346 disable 'threshold min/max' when 'use original...
|
commit | commitdiff | tree |
| 2017-02-14 |
gmungoc | JAL-2346 remove refactored fields, fix test for above...
|
commit | commitdiff | tree |
| 2017-02-14 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice
|
commit | commitdiff | tree |
| 2017-02-10 |
gmungoc | JAL-2371 small move of code, typo correction
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-1608 menu entry text; enable/disable Create/Remove...
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2401 tweaked button text, added Spanish
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2401 change 'Lower Case Colour' to checkbox with...
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2371 no test for lower case consensus as not expected...
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2371 ensure some colour scheme (may be None) is...
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2371 skip upper-casing consensus as it already is
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2405 check for circular reference in SequenceGroup...
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2405 set initial selection group alignment context
|
commit | commitdiff | tree |
| 2017-02-09 |
gmungoc | JAL-2405 enable nucleotide/peptide colour schemes in...
|
commit | commitdiff | tree |
| 2017-02-08 |
gmungoc | JAL-2405 set context on selection group for tailored...
|
commit | commitdiff | tree |
| 2017-02-08 |
gmungoc | JAL-2401 fix for NPE on selectedButtons, tweak for...
|
commit | commitdiff | tree |
| 2017-02-08 |
gmungoc | JAL-2399 JAL-2400 tidy Text Colour wording, behaviour...
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2401 Lower Case Colour toggleable, help text added
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2379 removed unused commented code
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2397 flag provided for 2.10.1 PCA gap calculation...
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2398 include 'compatibility mode' for C->R score...
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2397 scripts to toggle 2.10.1 / 2.10.2 PCA calculation...
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2397 PCA gap cost uses last column of score matrix
|
commit | commitdiff | tree |
| 2017-02-07 |
gmungoc | JAL-2398 corrected entry for C->R in Blosum62 matrix
|
commit | commitdiff | tree |
| 2017-02-06 |
gmungoc | JAL-2379 computePairwiseScores() moved to ScoreMatrix
|
commit | commitdiff | tree |
| 2017-02-03 |
gmungoc | JAL-2379 'direct' pairwise score calculation for PCA...
|
commit | commitdiff | tree |
| 2017-02-01 |
gmungoc | JAL-2371 (slight!) simplification of isApplicableTo()
|
commit | commitdiff | tree |
| 2017-02-01 |
gmungoc | JAL-2383 and Spanish!
|
commit | commitdiff | tree |
| 2017-01-31 |
gmungoc | JAL-2371 commented code removed only
|
commit | commitdiff | tree |
| 2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueShading
|
commit | commitdiff | tree |
| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPanel...
|
commit | commitdiff | tree |
| 2017-01-27 |
gmungoc | JAL-2379 commented out code removed
|
commit | commitdiff | tree |
| 2017-01-27 |
gmungoc | JAL-2371 CollectionColourScheme renamed ResidueShader...
|
commit | commitdiff | tree |
| 2017-01-27 |
gmungoc | JAL-2099 belated unit test
|
commit | commitdiff | tree |
| 2017-01-27 |
gmungoc | JAL-2360 JAL-2371 updates from review CR-JAL-1
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | JAL-2360 corrected comment
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | JAL-2360 C is Pink with consensus > 85% (not 100%)
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicability...
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSchemeApp...
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | JAL-2344 test fix and code tidy for review comments
|
commit | commitdiff | tree |
| 2017-01-26 |
gmungoc | JAL-2380 code tidy after review
|
commit | commitdiff | tree |
| 2017-01-25 |
gmungoc | JAL-2344 push Cache.getProperty("LAST_DIRECTORY") inside...
|
commit | commitdiff | tree |
| 2017-01-23 |
gmungoc | JAL-2379 made SparseMatrix.divide() so as to exactly...
|
commit | commitdiff | tree |
| 2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refactoring for
|
commit | commitdiff | tree |
| 2017-01-23 |
gmungoc | JAL-2386 simplify changeColour (doesn't change colour...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicability...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSchemeApp...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2385 tweak to applet 'switch colour slider context'
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicability...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSchemeApp...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2385 update slider settings when switching slider...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicability...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2383 fixup from last merge
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSchemeApp...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2383 check for null, spelling
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2383 make popup colour menu order and wording consistent
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | JAL-2383 restore group conservation slider setting...
|
commit | commitdiff | tree |
| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSchemeApp...
|
commit | commitdiff | tree |
| 2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project...
|
commit | commitdiff | tree |
| next |
git://source.jalview.org / jalview.git / search