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Merge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branch_i18n
2014-06-04 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1503 typo
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2014-06-04 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch_i18n
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1503 update author list for 2.8.1
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2014-06-04 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-690 JAL-1503 make file associations optional for...
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2014-06-04 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1503 tweak whatsNew document
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2014-06-04 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1503 JAL-690 document .jvp in release notes
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1514 - add jalview.org and dundee to explore if...
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2014-06-04 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04 Jim ProcterJAL-1503 tidying docs
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2014-06-04 Jim ProcterJAL-1355 key typo
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2014-06-03 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-03 Jim ProcterJAL-1503 documentation and release notes
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2014-06-03 Jim ProcterJAL-690 jvp rather than jar for save/restore state...
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2014-06-03 Jim ProcterJAL-690 JAL-1503 update file types/extensions in Jalview...
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2014-06-03 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-03 Jim ProcterJAL-1503 update version/branch version for this branch
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2014-06-03 Jim Procterregress fix on JAL-690 - insert association elements...
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2014-06-03 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-03 Jim ProcterJAL-1503 whats new and release history for 2.8.1 (still...
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2014-06-03 Jim ProcterJAL-1503 JAL-1350 rework documentation for 2.8.1
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2014-06-03 Jim ProcterJAL-1164 note that feature introduced in 2.8.0b1
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2014-06-03 Jim ProcterJAL-1503 JAL-1355 documentation
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2014-06-03 Jim ProcterJAL-1473 exclude score models not compatible with PCA...
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2014-06-03 Jim ProcterJAL-1503 gui changes (score models, flanking regions...
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2014-06-03 Jim ProcterJAL-1503 formatting
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2014-06-03 Jim ProcterJAL-1503 additional tree score functions
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2014-06-03 Jim ProcterJAL-1503 PAM250 documentation
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2014-06-03 Jim ProcterJAL-1503 document updated PCA interface
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2014-06-03 Jim ProcterJAL-690 add .jvp as default jalview project filetype
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2014-06-03 Jim ProcterJAL-1503 formatting
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2014-06-03 Jim ProcterJAL-1503 formatting build file
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2014-06-03 Jim ProcterJAL-1512 comment out for 2.8.1 release
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2014-06-03 Jim ProcterJAL-1512 fix calculation once again and include score...
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2014-06-03 Jim ProcterJAL-1473 make it easier to generate HTML documentation...
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2014-06-02 Jim ProcterJAL-1512 rejig buggy conservation-basesd score matrix...
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2014-05-28 Jim ProcterMerge branch 'docs/2_8_1_release' into Release_2_8_1_Branch
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2014-05-28 Jim ProcterMerge branch 'docs/2_8_1_release' into Release_2_8_1_Branch_i18n
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2014-05-28 Jim ProcterJAL-1509 use local deployJava
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2014-05-28 Jim Procterfix for JAL-1510 - workaround for IE9
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2014-05-28 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch_i18n
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2014-05-28 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-05-28 Jim ProcterJAL-1507 bugfix
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2014-05-27 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch_i18n
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2014-05-27 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-05-27 Jim ProcterJAL-1509 update deployJava.js from http://www.java...
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2014-05-27 Jim ProcterJAL-1507 added loop to throw dummy javascript calls...
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2014-05-27 Jim ProcterJAL-1402 conditional logic to ensure annotation & label...
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2014-05-27 Jim ProcterJAL-1508 make default font size 11pt for embedded menus...
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2014-05-23 Jim ProcterJAL-1445 updated documentation and added link in whatsNew
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2014-05-23 Jim ProcterJAL-1445 extend functionality to select or toggle selection...
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2014-05-22 Jim Procterremove non-utf8 characters in help pages
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2014-05-22 Jim ProcterJAL-1503 update version in GPL header
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2014-05-22 Jim ProcterJAL-1355 JAL-1503 update i18n note
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2014-05-22 Jim ProcterJAL-1503 new entry for 2.8.1 release history
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2014-05-22 Jim ProcterJAL-1503 JAL-1355 note about internationalisation in...
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2014-05-17 Jim ProcterJAL-1477 documentation and tooltips
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2014-05-13 Jim ProcterMerge branch 'bugfix/JAL-1239' into Release_2_8_1_Branch_i18n
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2014-05-13 Jim ProcterMerge branch 'bugfix/JAL-1239' into Release_2_8_1_Branch
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2014-05-13 Jim ProcterJAL-1239 cancelled flag should be checked and counted
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2014-05-13 Jim ProcterJAL-1239 make doubly sure sub job status is set to...
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2014-05-12 Jim ProcterMerge branch 'JAL-1397' into Release_2_8_1_Branch_i18n
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2014-05-12 Jim ProcterMerge branch 'JAL-1397' into Release_2_8_1_Branch
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2014-05-12 Jim ProcterJAL-1397 catch other random version strings
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2014-05-12 Jim Procterpatch for regression introduced JAL-1397
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2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_Branc...
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2014-05-02 Jim ProcterMerge branch 'JAL-1397' into Release_2_8_1_Branch
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2014-05-02 Jim ProcterJAL-1397 JAL-1066 JAL-1233 refactored annotation colours...
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2014-05-02 Jim ProcterJAL-1369 JAL-1397 version check to support correct...
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2014-05-02 Jim Procterformatting
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2014-05-02 Jim ProcterJAL-1233 JAL-1066 fix for JAL-1397 test: allow per...
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2014-05-01 Jim ProcterJAL-1397 (probably buggy) test for recovery of background...
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2014-05-01 Jim Procterremove todo
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2014-05-01 Jim ProcterJAL-1492 formatting and squash NPEs
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2014-05-01 Jim ProcterJAL-1092 TODO - allow Jalview/JalviewLite to generate...
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2014-05-01 Jim ProcterJAL-1492 JAL-1397 make AnnotatedCollectionI context...
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2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and...
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2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 factory method to...
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2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 modifiable flag on...
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2014-05-01 Jim Procterjavadoc
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2014-05-01 Jim Procterproperly quit so JUnit marks tests as successful
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2014-05-01 Jim ProcterJAL-1497 check to see if tree structure is ready for...
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2014-05-01 Jim Procterfix for JAL-1495 - initialise menu entry from current...
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2014-05-01 Jim Procterfix for JAL-1494 tweaked logic to fix NPEs and modify...
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2014-05-01 Jim ProcterJAL-969 remove unnecessary overrides
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2014-05-01 Jim ProcterJAL-961 configure conservation worker from alignment...
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2014-05-01 Jim ProcterJAL-961 store result of conservation analysis worker...
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2014-05-01 Jim Proctermake sure valid value for non-gapped calculation with...
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2014-04-29 Jim ProcterJAL-643 - abstracted colourscheme components to allow...
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2014-04-29 Jim ProcterMerge branch 'JAL-1340_redundancy' into Release_2_8_1_Branch
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