jalview.git
2020-07-08 Ben SoaresMerge branch 'bug/JAL-3541_cherry_pick_to_releases_Rele...
2020-07-08 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into...
2020-07-08 Ben SoaresMerge branch 'task/JAL-3609_HiDPI_support_in_java'...
2020-07-07 Ben SoaresJAL-3608 Changes from code review CR-JAL-236
2020-07-07 Ben SoaresJAL-3608 ex stacktraces now go to Cache.log.debug
2020-07-07 Ben SoaresJAL-3628 System.out/err -> Cache.log.info/error
2020-07-07 Ben SoaresMerge branch 'bug/JAL-3628_Unable_to_save_update_to_exi...
2020-07-07 Ben SoaresJAL-3628 System.out/err -> Cache.log.info/error
2020-07-07 Ben SoaresJAL-3541 ensure deletion of cloverReportDir
2020-07-07 Ben SoaresJAL-3541 small fix for clover.xml location expected...
2020-07-07 soaresJAL-3541 added a property/variable style comment to...
2020-07-07 Ben SoaresJAL-3541 Fixed report path for build artifacts
2020-07-07 Ben SoaresJAL-3541 Added mem setting and jvmArgs for cloverReporting
2020-07-07 Ben SoaresJAL-3541 Individual tests now instrumented and reported...
2020-07-07 Ben SoaresJAL-3541 Helpers for running tests, and other commands...
2020-07-07 Ben SoaresJAL-3541 JavaExec tasks for cloverInstr and cloverRepor...
2020-07-07 Ben SoaresJAL-3541 increase maxheapsize for test worker process
2020-07-07 Ben SoaresJAL-3541 tidying build.gradle, delete cloverInstrDir...
2020-07-07 Ben SoaresJAL-3541 perhaps a better clean for clover. fixed
2020-07-07 Ben SoaresJAL-3541 perhaps a better clean for clover
2020-07-07 Ben SoaresJAL-3541 rejigged clover tasks very mildly
2020-07-07 Ben SoaresJAL-3685 Fixed single quotes in formatMessage messages
2020-07-07 Ben SoaresJAL-3628 Fixed oddly worded and non-formatted error...
2020-07-06 Ben SoaresMerge branch 'bug/JAL-3628_Unable_to_save_update_to_exi...
2020-07-06 Ben SoaresMerge branch 'bug/JAL-3628_Unable_to_save_update_to_exi...
2020-07-06 Ben SoaresJAL-3676 improvement for visual selection of console...
2020-07-06 Ben SoaresMerge branch 'bug/JAL-3628_Unable_to_save_update_to_exi...
2020-07-06 Ben SoaresJAL-3628 improvement for visual selection of console...
2020-07-06 Ben SoaresJAL-3628 Fix for slightly incorrect boolean usage to...
2020-07-06 Ben SoaresJAL-3628 Even more Cache.log.debug statements
2020-07-06 gmungocJAL-3570 JAL-3187 spanish translations for tabbed featu...
2020-07-06 gmungocJAL-3570 updated external help links
2020-07-04 Jim ProcterMerge branch 'merge/JAL-3609_and_JAL-3608' into release...
2020-07-04 Jim ProcterJAL-3675 version update and documentation for JAL-3493...
2020-07-04 Jim ProcterJAL-3638 JAL-3680 fix docs for Alt + Arrow LRUD in...
2020-07-04 Jim ProcterJAL-3638 don’t move cursor to next gap after moving...
2020-07-04 Jim ProcterJAL-3680 check whether a sequence selection exists...
2020-07-04 Jim ProcterJAL-3638 shift+arrow keys in cursor mode jumps cursor...
2020-07-04 Ben SoaresJAL-3628 More Cache.log.debug statements
2020-07-02 Ben SoaresJAL-3676 code review -- added non-listed Level into...
2020-07-01 Ben SoaresJAL-3609 Allow pass-through of setHiDPIScale property...
2020-07-01 Ben SoaresMerge branch 'task/JAL-3608_property_set_laf_and_tests_...
2020-06-30 Ben SoaresJAL-3676 Added Log Level ComboBox and Copy to Clipboard...
2020-06-29 Jim ProcterJAL-3675 2.11.1.1 release notes
2020-06-29 Jim ProcterMerge branch 'patch/Clear_Highlight_JAL-3493' into...
2020-06-29 Jim ProcterJAL-3493 clear search highlights when escape/deselect all
2020-06-29 Jim ProcterJAL-3493 failing test - creates a highlight and column...
2020-06-24 Ben SoaresJAL-3667 Fixed single backupfile error deleting the...
2020-06-21 Ben SoaresJAL-3609 Report when scale setting used.
2020-06-21 Ben SoaresJAL-3609 New auto-scale 'formula' for linux HiDPI....
2020-06-16 Ben SoaresJAL-3608 non-JS cherry-pick
2020-06-16 Ben SoaresJAL-3608 formatting save only
2020-06-16 Ben SoaresJAL-3608 formatting save only
2020-06-15 Ben SoaresJAL-3628 Changed other calls to renameTo to use BackupF...
2020-06-08 Ben SoaresJAL-3628 Changed all file1.renameTo(file2) calls to...
2020-05-22 soaresJAL-3609 corrected maxdimension to mindimension. Adjust...
2020-05-20 Ben SoaresJAL-3609 removed debugging prints
2020-05-19 Ben SoaresJAL-3609 changed property names to something more palat...
2020-05-19 Ben SoaresJAL-3609 system properties to force a scale, or automat...
2020-05-19 Ben SoaresJAL-3609 Added a -DforceHiDPISetting=true option mainly...
2020-05-18 gmungocJAL-3613 remove debug code committed in error
2020-05-15 Ben SoaresJAL-3609 HiDPI scale setting done via system prop in...
2020-05-01 gmungocMerge branch 'bug/JAL-3613emblCDSTracking' into release...
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search...
2020-04-22 Jim ProcterMerge branch 'releases/Release_2_11_1_Branch'
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... Release_2_11_1_0
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files
2020-04-21 Jim ProcterJAL-3407 release notes - JAL-247 - for auto-set-ID...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 fix JAL-3574 - remove from known issues for...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3574 JAL-3407 release notes
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati...
2020-04-21 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 add and document ComputePeptideVariants.groovy
2020-04-21 Ben SoaresJAL-3577 changed default RELEASE dir in build.gradle...
2020-04-21 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
2020-04-21 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2020-04-21 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
2020-04-21 Jim ProcterJAL-3567 JAL-3407 document sequence features report...
2020-04-21 Ben SoaresJAL-3577 Added newer install dirs to the deletion list...
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates...
2020-04-21 Jim ProcterJAL-367 code tidy
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit...
2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein conseque...
2020-04-16 gmungocJAL-3567 report mapped location for virtual features...
2020-04-14 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
2020-04-14 Jim ProcterJAL-3407 JAL-3529 release notes
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec...
2020-04-14 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base...
2020-04-14 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch
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