jalview.git
2016-11-21 Jim ProcterJAL-2325 release notes for JAL-2317
2016-11-21 Jim ProcterJAL-1888 JAL-2325 release 2.9.0b1 notes updated post...
2016-11-21 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-21 Jim ProcterJAL-1723 release notes and note in documentation about...
2016-11-21 Jim ProcterJAL-2325 update release 2.10.0 release notes for JAL...
2016-11-18 Jim ProcterMerge branch 'bug/JAL-98consensusMemory' into develop
2016-11-18 gmungocJAL-98 with the two types missing from last commit... bug/JAL-98consensusMemory
2016-11-17 gmungocJAL-98 ProfilesI container for profiles for columns
2016-11-17 gmungocJAL-98 javadoc, third party acknowledgements (and very...
2016-11-16 Jim ProcterMerge branch 'features/JAL-1723_sequenceReport' into...
2016-11-16 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-16 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-16 Jim ProcterJAL-2325 release notes for 2.10.1 - pass one
2016-11-16 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-16 kiramtJAL-2282 Updated docs with information about when warni... bug/JAL-2282
2016-11-16 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-16 tcofoegbuJAL-2322 JAL-2309 replaced references to isheadless...
2016-11-16 Jim ProcterJAL-2318 revised documentation for above PID Threshold
2016-11-16 gmungocJAL-2324 fix and tests for comparison of Float.NaN...
2016-11-16 gmungocJAL-2319 corrected reporting of SIFTS mapping
2016-11-14 tcofoegbuJAL-2322 Refactored unified architecture for data ...
2016-11-11 tcofoegbuJAL-2277 Refactored out duplicated method - printUnwrap...
2016-11-10 tcofoegbuMerge branch 'bug/JAL-2317_jmol_chimera-chain-factorisa...
2016-11-10 tcofoegbuMerge branch 'develop' into bug/JAL-2317_jmol_chimera...
2016-11-10 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-10 tcofoegbuJAL-2317 Fixed Chimera command for hiding/showing disti... bug/JAL-2317_jmol_chimera-chain-factorisation
2016-11-10 tcofoegbuBugfix to enable accurate chain extraction/association...
2016-11-08 gmungocJAL-2301 corrected search example to match AA propertie...
2016-11-08 gmungocJAL-2301 made T hydrophobic as per the cited conservati...
2016-11-08 gmungocJAL-1961 added link to GFF3 format as well as GFF2
2016-11-08 kiramtJAL-2309 Made test timeout slightly longer bug/JAL-2309
2016-11-08 kiramtJAL-2309 Adjusted timeout on headless tests
2016-11-08 tcofoegbuJAL-2280 Updated spanish translation as recommended...
2016-11-08 tcofoegbuJAL-2292 updated method calls
2016-11-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-08 tcofoegbuJAL-2292 renamed method and improved implementation...
2016-11-07 gmungocJAL-1270 renamed helper method so it is not run as...
2016-11-07 gmungocJAL-2272 another test case
2016-11-07 gmungocJAL-1805 groups=Functional added where missing
2016-11-07 gmungocJAL-2272 unit tests added for Platform.isControlDown
2016-11-07 gmungocJAL-2318 updated help text
2016-11-07 gmungocJAL-2282 show url links that need checked; remove ...
2016-11-04 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-04 kiramtJAL-2315 Clear sequenceURLLinks if all sequence links...
2016-11-04 tcofoegbuJAL-2292 squashed bug that breaks feature mapping for...
2016-11-04 tcofoegbuJAL-2292 added javadoc for compareChar(..) utility...
2016-11-04 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-04 tcofoegbuJAL-2195 JAL-2262 house keeping
2016-11-04 tcofoegbuJAL-2292 fix for wrong mapping output in sequence mappi...
2016-11-04 tcofoegbuJAL-2292 Wrote utility method for comparing two char...
2016-11-04 tcofoegbuJAL-2292 Unit test for utility method for comparing...
2016-11-04 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-04 kiramtJAL-2282 Better check for existing url links
2016-11-04 gmungocJAL-2272 right mouse button on Mac is not Cmd equivalent!
2016-11-04 kiramtJAL-2282 Remove Cache dependency from applet
2016-11-04 kiramtJAL-2282 Message box stays on top at Jalview open;...
2016-11-03 kiramtJAL-2282 Link menu disabled if there are no valid links
2016-11-03 kiramtJAL-2282 Updated warn.url_must_contain
2016-11-03 kiramtJAL-2282 If checkbox on warning dialog is unclicked...
2016-11-03 kiramtJAL-2281 Back out unit test update, as Mungo already...
2016-11-03 kiramtMerge remote-tracking branch 'origin/develop' into...
2016-11-03 kiramtJAL-2308 Fixed hiddenColsTest bug/JAL-2308
2016-11-03 tcofoegbuJAL-2312 unit test for bug fix - repeated mapping gener...
2016-11-03 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-03 tcofoegbuJAL-2312 Bug fix for repeated mapping generation from...
2016-11-03 gmungocJAL-2281 test added to show searchRefs is now not case...
2016-11-03 kiramtJAL-2281 Minor unit test addition
2016-11-02 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-02 kiramtJAL-2281 Unit test updates
2016-11-02 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-02 gmungocJAL-2301 table formatted, and corrected to match the...
2016-11-02 kiramtJAL-2281 Use DBRefs.selectRefs to uppercase URL link...
2016-11-02 kiramtJAL-2282 Refactor applet too
2016-11-02 kiramtJAL-2282 Updated and checked messages, English and...
2016-11-02 kiramtJAL-2282 Updated help documentation
2016-11-02 gmungocJAL-98 JAL-1854 encapsulate 'magic number' threshold...
2016-11-02 gmungocJAL-98 ProfileI interface for Profile
2016-11-02 gmungocJAL-98 test updated for percentage rounded
2016-11-02 gmungocJAL-98 Profile and ResidueCount moved from analysis...
2016-11-02 gmungocJAL-98 wording "negatively conserved" now "absence...
2016-11-02 kiramtJAL-2282 Code tidy
2016-11-02 kiramtJAL-2282 Renamed internal use of sequence id / db acces...
2016-11-02 kiramtJAL-2282 URLLink unit tests updated
2016-11-01 gmungocConservation now using ResidueCount; tests added
2016-11-01 gmungocJAL-98 use Integer constants; tests added for propHash...
2016-11-01 gmungocJAL-98 typo in javadoc
2016-11-01 gmungocJAL-98 simplified repeat() method
2016-11-01 gmungocMerge branch 'develop' of https://source.jalview.org...
2016-11-01 tcofoegbuJAL-2280 refactored and improved structure file identif...
2016-11-01 kiramtJAL-2282 Refactor SequenceAnnotationReport to use refac...
2016-11-01 kiramtJAL-2282 Merge
2016-11-01 kiramtJAL-2282 Changed DB accession id token to $DB_ACCESSION...
2016-11-01 kiramtJAL-2282 Refactored URL link creation into UrlLink
2016-11-01 kiramtJAL-2282 Removed unexpected ; from code
2016-11-01 kiramtJAL-2282 Force double-clicking to use sequence_id cases...
2016-10-31 gmungocJAL-98 round when formatting dec places
2016-10-31 gmungocJAL-1723 ellipsis in tooltip if xrefs to more than...
2016-10-31 gmungocMerge branch 'develop' into features/JAL-1723_sequenceR...
2016-10-31 kiramtForce double-clicking to use sequence_id cases and...
2016-10-31 kiramtUpdated messages.
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