binaries/src/ViennaRNA/doc/html/group__subopt__zuker.html

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  61 <div class="title">Suboptimal structures according to Zuker et al. 1989</div>  </div>
  62 <div class="ingroups"><a class="el" href="group__subopt__fold.html">Enumerating Suboptimal Structures</a></div></div><!--header-->
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  65   <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Collaboration diagram for Suboptimal structures according to Zuker et al. 1989:</div>
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  76 Functions</h2></td></tr>
  77 <tr class="memitem:ga0d5104e3ecf119d8eabd40aa5fe47f90"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structSOLUTION.html">SOLUTION</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__subopt__zuker.html#ga0d5104e3ecf119d8eabd40aa5fe47f90">zukersubopt</a> (const char *string)</td></tr>
  78 <tr class="memdesc:ga0d5104e3ecf119d8eabd40aa5fe47f90"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compute Zuker type suboptimal structures.  <a href="#ga0d5104e3ecf119d8eabd40aa5fe47f90"></a><br/></td></tr>
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  80 <a class="el" href="structSOLUTION.html">SOLUTION</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__subopt__zuker.html#ga6d98a9450d1affadf144ac79f543da8c">zukersubopt_par</a> (const char *string, <a class="el" href="structparamT.html">paramT</a> *parameters)</td></tr>
  81 <tr class="memdesc:ga6d98a9450d1affadf144ac79f543da8c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compute Zuker type suboptimal structures. <br/></td></tr>
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  83 <hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
  84 <hr/><h2>Function Documentation</h2>
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  90           <td class="memname"><a class="el" href="structSOLUTION.html">SOLUTION</a>* zukersubopt </td>
  91           <td>(</td>
  92           <td class="paramtype">const char *&#160;</td>
  93           <td class="paramname"><em>string</em></td><td>)</td>
  94           <td></td>
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  98
  99 <p>Compute Zuker type suboptimal structures. </p>
 100 <p>Compute Suboptimal structures according to M. Zuker, i.e. for every possible base pair the minimum energy structure containing the resp. base pair. Returns a list of these structures and their energies.</p>
 101 <dl class="params"><dt>Parameters:</dt><dd>
 102   <table class="params">
 103     <tr><td class="paramname">string</td><td>RNA sequence </td></tr>
 104   </table>
 105   </dd>
 106 </dl>
 107 <dl class="section return"><dt>Returns:</dt><dd>List of zuker suboptimal structures </dd></dl>
 108
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