binaries/src/ViennaRNA/man/Makefile.in

   1 # Makefile.in generated by automake 1.11.6 from Makefile.am.
   2 # @configure_input@
   3
   4 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
   5 # 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011 Free Software
   6 # Foundation, Inc.
   7 # This Makefile.in is free software; the Free Software Foundation
   8 # gives unlimited permission to copy and/or distribute it,
   9 # with or without modifications, as long as this notice is preserved.
  10
  11 # This program is distributed in the hope that it will be useful,
  12 # but WITHOUT ANY WARRANTY, to the extent permitted by law; without
  13 # even the implied warranty of MERCHANTABILITY or FITNESS FOR A
  14 # PARTICULAR PURPOSE.
  15
  16 @SET_MAKE@
  17 VPATH = @srcdir@
  18 am__make_dryrun = \
  19   { \
  20     am__dry=no; \
  21     case $$MAKEFLAGS in \
  22       *\\[\ \   ]*) \
  23         echo 'am--echo: ; @echo "AM"  OK' | $(MAKE) -f - 2>/dev/null \
  24           | grep '^AM OK$$' >/dev/null || am__dry=yes;; \
  25       *) \
  26         for am__flg in $$MAKEFLAGS; do \
  27           case $$am__flg in \
  28             *=*|--*) ;; \
  29             *n*) am__dry=yes; break;; \
  30           esac; \
  31         done;; \
  32     esac; \
  33     test $$am__dry = yes; \
  34   }
  35 pkgdatadir = $(datadir)/@PACKAGE@
  36 pkgincludedir = $(includedir)/@PACKAGE@
  37 pkglibdir = $(libdir)/@PACKAGE@
  38 pkglibexecdir = $(libexecdir)/@PACKAGE@
  39 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
  40 install_sh_DATA = $(install_sh) -c -m 644
  41 install_sh_PROGRAM = $(install_sh) -c
  42 install_sh_SCRIPT = $(install_sh) -c
  43 INSTALL_HEADER = $(INSTALL_DATA)
  44 transform = $(program_transform_name)
  45 NORMAL_INSTALL = :
  46 PRE_INSTALL = :
  47 POST_INSTALL = :
  48 NORMAL_UNINSTALL = :
  49 PRE_UNINSTALL = :
  50 POST_UNINSTALL = :
  51 build_triplet = @build@
  52 host_triplet = @host@
  53 subdir = man
  54 DIST_COMMON = $(dist_man_MANS) $(srcdir)/Makefile.am \
  55         $(srcdir)/Makefile.in $(srcdir)/cmdlopt.sh.in texinfo.tex
  56 ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
  57 am__aclocal_m4_deps = $(top_srcdir)/acinclude.m4 \
  58         $(top_srcdir)/m4/package.m4 $(top_srcdir)/configure.ac
  59 am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
  60         $(ACLOCAL_M4)
  61 mkinstalldirs = $(install_sh) -d
  62 CONFIG_HEADER = $(top_builddir)/config.h
  63 CONFIG_CLEAN_FILES = cmdlopt.sh
  64 CONFIG_CLEAN_VPATH_FILES =
  65 AM_V_GEN = $(am__v_GEN_@AM_V@)
  66 am__v_GEN_ = $(am__v_GEN_@AM_DEFAULT_V@)
  67 am__v_GEN_0 = @echo "  GEN   " $@;
  68 AM_V_at = $(am__v_at_@AM_V@)
  69 am__v_at_ = $(am__v_at_@AM_DEFAULT_V@)
  70 am__v_at_0 = @
  71 SOURCES =
  72 DIST_SOURCES =
  73 INFO_DEPS = $(srcdir)/RNAlib.info
  74 TEXINFO_TEX = $(top_srcdir)/config/texinfo.tex
  75 am__TEXINFO_TEX_DIR = $(top_srcdir)/config
  76 DVIS = RNAlib.dvi
  77 PDFS = RNAlib.pdf
  78 PSS = RNAlib.ps
  79 HTMLS = RNAlib.html
  80 TEXINFOS = RNAlib.texinfo
  81 TEXI2DVI = texi2dvi
  82 TEXI2PDF = $(TEXI2DVI) --pdf --batch
  83 MAKEINFOHTML = $(MAKEINFO) --html
  84 AM_MAKEINFOHTMLFLAGS = $(AM_MAKEINFOFLAGS)
  85 DVIPS = dvips
  86 am__can_run_installinfo = \
  87   case $$AM_UPDATE_INFO_DIR in \
  88     n|no|NO) false;; \
  89     *) (install-info --version) >/dev/null 2>&1;; \
  90   esac
  91 am__installdirs = "$(DESTDIR)$(infodir)" "$(DESTDIR)$(man1dir)"
  92 am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
  93 am__vpath_adj = case $$p in \
  94     $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
  95     *) f=$$p;; \
  96   esac;
  97 am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
  98 am__install_max = 40
  99 am__nobase_strip_setup = \
 100   srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
 101 am__nobase_strip = \
 102   for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
 103 am__nobase_list = $(am__nobase_strip_setup); \
 104   for p in $$list; do echo "$$p $$p"; done | \
 105   sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
 106   $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
 107     if (++n[$$2] == $(am__install_max)) \
 108       { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
 109     END { for (dir in files) print dir, files[dir] }'
 110 am__base_list = \
 111   sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
 112   sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
 113 am__uninstall_files_from_dir = { \
 114   test -z "$$files" \
 115     || { test ! -d "$$dir" && test ! -f "$$dir" && test ! -r "$$dir"; } \
 116     || { echo " ( cd '$$dir' && rm -f" $$files ")"; \
 117          $(am__cd) "$$dir" && rm -f $$files; }; \
 118   }
 119 man1dir = $(mandir)/man1
 120 NROFF = nroff
 121 MANS = $(dist_man_MANS)
 122 DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 123 ACLOCAL = @ACLOCAL@
 124 AMTAR = @AMTAR@
 125 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 126 AUTOCONF = @AUTOCONF@
 127 AUTOHEADER = @AUTOHEADER@
 128 AUTOMAKE = @AUTOMAKE@
 129 AWK = @AWK@
 130 CC = @CC@
 131 CCDEPMODE = @CCDEPMODE@
 132 CFLAGS = @CFLAGS@
 133 CLUSTER_DIR = @CLUSTER_DIR@
 134 CPP = @CPP@
 135 CPPFLAGS = @CPPFLAGS@
 136 CXX = @CXX@
 137 CXXCPP = @CXXCPP@
 138 CXXDEPMODE = @CXXDEPMODE@
 139 CXXFLAGS = @CXXFLAGS@
 140 CXXLD = @CXXLD@
 141 CYGPATH_W = @CYGPATH_W@
 142 DEFS = @DEFS@
 143 DEPDIR = @DEPDIR@
 144 DOXYGEN_CMD_LATEX = @DOXYGEN_CMD_LATEX@
 145 DOXYGEN_CMD_MAKEINDEX = @DOXYGEN_CMD_MAKEINDEX@
 146 DOXYGEN_CONF = @DOXYGEN_CONF@
 147 DOXYGEN_DOCDIR = @DOXYGEN_DOCDIR@
 148 DOXYGEN_GENERATE_HTML = @DOXYGEN_GENERATE_HTML@
 149 DOXYGEN_GENERATE_LATEX = @DOXYGEN_GENERATE_LATEX@
 150 DOXYGEN_HAVE_DOT = @DOXYGEN_HAVE_DOT@
 151 DOXYGEN_PROJECT_NAME = @DOXYGEN_PROJECT_NAME@
 152 DOXYGEN_SRCDIR = @DOXYGEN_SRCDIR@
 153 DOXYGEN_WITH_PDFLATEX = @DOXYGEN_WITH_PDFLATEX@
 154 ECHO_C = @ECHO_C@
 155 ECHO_N = @ECHO_N@
 156 ECHO_T = @ECHO_T@
 157 EGREP = @EGREP@
 158 EXEEXT = @EXEEXT@
 159 FPIC = @FPIC@
 160 GREP = @GREP@
 161 INSTALL = @INSTALL@
 162 INSTALL_DATA = @INSTALL_DATA@
 163 INSTALL_PROGRAM = @INSTALL_PROGRAM@
 164 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 165 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 166 ISODATE = @ISODATE@
 167 LDFLAGS = @LDFLAGS@
 168 LIBOBJS = @LIBOBJS@
 169 LIBS = @LIBS@
 170 LIBSVM_DIR = @LIBSVM_DIR@
 171 LTLIBOBJS = @LTLIBOBJS@
 172 MAKEINFO = @MAKEINFO@
 173 MKDIR_P = @MKDIR_P@
 174 OBJEXT = @OBJEXT@
 175 OPENMP_CFLAGS = @OPENMP_CFLAGS@
 176 PACKAGE = @PACKAGE@
 177 PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
 178 PACKAGE_NAME = @PACKAGE_NAME@
 179 PACKAGE_STRING = @PACKAGE_STRING@
 180 PACKAGE_TARNAME = @PACKAGE_TARNAME@
 181 PACKAGE_URL = @PACKAGE_URL@
 182 PACKAGE_VERSION = @PACKAGE_VERSION@
 183 PATH_SEPARATOR = @PATH_SEPARATOR@
 184 PERLPREFIX = @PERLPREFIX@
 185 PERL_INTERFACE = @PERL_INTERFACE@
 186 POW_LIB = @POW_LIB@
 187 PYTHON_INTERFACE = @PYTHON_INTERFACE@
 188 PerlCmd = @PerlCmd@
 189 PythonCmd = @PythonCmd@
 190 RANLIB = @RANLIB@
 191 REFERENCE_MANUAL_PDF_NAME = @REFERENCE_MANUAL_PDF_NAME@
 192 REFERENCE_MANUAL_TAGFILE = @REFERENCE_MANUAL_TAGFILE@
 193 SET_MAKE = @SET_MAKE@
 194 SHELL = @SHELL@
 195 STRIP = @STRIP@
 196 VERSION = @VERSION@
 197 abs_builddir = @abs_builddir@
 198 abs_srcdir = @abs_srcdir@
 199 abs_top_builddir = @abs_top_builddir@
 200 abs_top_srcdir = @abs_top_srcdir@
 201 ac_ct_CC = @ac_ct_CC@
 202 ac_ct_CXX = @ac_ct_CXX@
 203 am__include = @am__include@
 204 am__leading_dot = @am__leading_dot@
 205 am__quote = @am__quote@
 206 am__tar = @am__tar@
 207 am__untar = @am__untar@
 208 bindir = @bindir@
 209 build = @build@
 210 build_alias = @build_alias@
 211 build_cpu = @build_cpu@
 212 build_os = @build_os@
 213 build_vendor = @build_vendor@
 214 builddir = @builddir@
 215 datadir = @datadir@
 216 datarootdir = @datarootdir@
 217 docdir = @docdir@
 218 dot = @dot@
 219 doxygen = @doxygen@
 220 dvidir = @dvidir@
 221 egrep = @egrep@
 222 exec_prefix = @exec_prefix@
 223 host = @host@
 224 host_alias = @host_alias@
 225 host_cpu = @host_cpu@
 226 host_os = @host_os@
 227 host_vendor = @host_vendor@
 228 htmldir = @htmldir@
 229 includedir = @includedir@
 230 infodir = @infodir@
 231 install_sh = @install_sh@
 232 latex = @latex@
 233 libdir = @libdir@
 234 libexecdir = @libexecdir@
 235 localedir = @localedir@
 236 localstatedir = @localstatedir@
 237 makeindex = @makeindex@
 238 mandir = @mandir@
 239 mkdir_p = @mkdir_p@
 240 oldincludedir = @oldincludedir@
 241 pdfdir = @pdfdir@
 242 pdflatex = @pdflatex@
 243 perl = @perl@
 244 prefix = @prefix@
 245 program_transform_name = @program_transform_name@
 246 psdir = @psdir@
 247 sbindir = @sbindir@
 248 sharedstatedir = @sharedstatedir@
 249 srcdir = @srcdir@
 250 subdirs = @subdirs@
 251 sysconfdir = @sysconfdir@
 252 target_alias = @target_alias@
 253 top_build_prefix = @top_build_prefix@
 254 top_builddir = @top_builddir@
 255 top_srcdir = @top_srcdir@
 256 info_TEXINFOS = RNAlib.texinfo
 257 dist_man_MANS = RNA2Dfold.1 RNAaliduplex.1 RNAalifold.1 RNAcofold.1 RNAduplex.1 RNAeval.1\
 258                 RNAfold.1 RNAheat.1 RNAinverse.1 RNALalifold.1 RNALfold.1\
 259                 RNApaln.1 RNAparconv.1 RNAplfold.1 RNAplot.1 RNAsubopt.1 RNAup.1\
 260                 RNAPKplex.1 RNAsnoop.1 RNAplex.1 RNAdistance.1 RNApdist.1
 261
 262 all: all-am
 263
 264 .SUFFIXES:
 265 .SUFFIXES: .dvi .html .info .pdf .ps .texinfo
 266 $(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
 267         @for dep in $?; do \
 268           case '$(am__configure_deps)' in \
 269             *$$dep*) \
 270               ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
 271                 && { if test -f $@; then exit 0; else break; fi; }; \
 272               exit 1;; \
 273           esac; \
 274         done; \
 275         echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu man/Makefile'; \
 276         $(am__cd) $(top_srcdir) && \
 277           $(AUTOMAKE) --gnu man/Makefile
 278 .PRECIOUS: Makefile
 279 Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
 280         @case '$?' in \
 281           *config.status*) \
 282             cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
 283           *) \
 284             echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
 285             cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
 286         esac;
 287
 288 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
 289         cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 290
 291 $(top_srcdir)/configure:  $(am__configure_deps)
 292         cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 293 $(ACLOCAL_M4):  $(am__aclocal_m4_deps)
 294         cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 295 $(am__aclocal_m4_deps):
 296 cmdlopt.sh: $(top_builddir)/config.status $(srcdir)/cmdlopt.sh.in
 297         cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
 298
 299 .texinfo.info:
 300         restore=: && backupdir="$(am__leading_dot)am$$$$" && \
 301         am__cwd=`pwd` && $(am__cd) $(srcdir) && \
 302         rm -rf $$backupdir && mkdir $$backupdir && \
 303         if ($(MAKEINFO) --version) >/dev/null 2>&1; then \
 304           for f in $@ $@-[0-9] $@-[0-9][0-9] $(@:.info=).i[0-9] $(@:.info=).i[0-9][0-9]; do \
 305             if test -f $$f; then mv $$f $$backupdir; restore=mv; else :; fi; \
 306           done; \
 307         else :; fi && \
 308         cd "$$am__cwd"; \
 309         if $(MAKEINFO) $(AM_MAKEINFOFLAGS) $(MAKEINFOFLAGS) -I $(srcdir) \
 310          -o $@ $<; \
 311         then \
 312           rc=0; \
 313           $(am__cd) $(srcdir); \
 314         else \
 315           rc=$$?; \
 316           $(am__cd) $(srcdir) && \
 317           $$restore $$backupdir/* `echo "./$@" | sed 's|[^/]*$$||'`; \
 318         fi; \
 319         rm -rf $$backupdir; exit $$rc
 320
 321 .texinfo.dvi:
 322         TEXINPUTS="$(am__TEXINFO_TEX_DIR)$(PATH_SEPARATOR)$$TEXINPUTS" \
 323         MAKEINFO='$(MAKEINFO) $(AM_MAKEINFOFLAGS) $(MAKEINFOFLAGS) -I $(srcdir)' \
 324         $(TEXI2DVI) $<
 325
 326 .texinfo.pdf:
 327         TEXINPUTS="$(am__TEXINFO_TEX_DIR)$(PATH_SEPARATOR)$$TEXINPUTS" \
 328         MAKEINFO='$(MAKEINFO) $(AM_MAKEINFOFLAGS) $(MAKEINFOFLAGS) -I $(srcdir)' \
 329         $(TEXI2PDF) $<
 330
 331 .texinfo.html:
 332         rm -rf $(@:.html=.htp)
 333         if $(MAKEINFOHTML) $(AM_MAKEINFOHTMLFLAGS) $(MAKEINFOFLAGS) -I $(srcdir) \
 334          -o $(@:.html=.htp) $<; \
 335         then \
 336           rm -rf $@; \
 337           if test ! -d $(@:.html=.htp) && test -d $(@:.html=); then \
 338             mv $(@:.html=) $@; else mv $(@:.html=.htp) $@; fi; \
 339         else \
 340           if test ! -d $(@:.html=.htp) && test -d $(@:.html=); then \
 341             rm -rf $(@:.html=); else rm -Rf $(@:.html=.htp) $@; fi; \
 342           exit 1; \
 343         fi
 344 $(srcdir)/RNAlib.info: RNAlib.texinfo
 345 RNAlib.dvi: RNAlib.texinfo
 346 RNAlib.pdf: RNAlib.texinfo
 347 RNAlib.html: RNAlib.texinfo
 348 .dvi.ps:
 349         TEXINPUTS="$(am__TEXINFO_TEX_DIR)$(PATH_SEPARATOR)$$TEXINPUTS" \
 350         $(DVIPS) -o $@ $<
 351
 352 uninstall-dvi-am:
 353         @$(NORMAL_UNINSTALL)
 354         @list='$(DVIS)'; test -n "$(dvidir)" || list=; \
 355         for p in $$list; do \
 356           $(am__strip_dir) \
 357           echo " rm -f '$(DESTDIR)$(dvidir)/$$f'"; \
 358           rm -f "$(DESTDIR)$(dvidir)/$$f"; \
 359         done
 360
 361 uninstall-html-am:
 362         @$(NORMAL_UNINSTALL)
 363         @list='$(HTMLS)'; test -n "$(htmldir)" || list=; \
 364         for p in $$list; do \
 365           $(am__strip_dir) \
 366           echo " rm -rf '$(DESTDIR)$(htmldir)/$$f'"; \
 367           rm -rf "$(DESTDIR)$(htmldir)/$$f"; \
 368         done
 369
 370 uninstall-info-am:
 371         @$(PRE_UNINSTALL)
 372         @if test -d '$(DESTDIR)$(infodir)' && $(am__can_run_installinfo); then \
 373           list='$(INFO_DEPS)'; \
 374           for file in $$list; do \
 375             relfile=`echo "$$file" | sed 's|^.*/||'`; \
 376             echo " install-info --info-dir='$(DESTDIR)$(infodir)' --remove '$(DESTDIR)$(infodir)/$$relfile'"; \
 377             if install-info --info-dir="$(DESTDIR)$(infodir)" --remove "$(DESTDIR)$(infodir)/$$relfile"; \
 378             then :; else test ! -f "$(DESTDIR)$(infodir)/$$relfile" || exit 1; fi; \
 379           done; \
 380         else :; fi
 381         @$(NORMAL_UNINSTALL)
 382         @list='$(INFO_DEPS)'; \
 383         for file in $$list; do \
 384           relfile=`echo "$$file" | sed 's|^.*/||'`; \
 385           relfile_i=`echo "$$relfile" | sed 's|\.info$$||;s|$$|.i|'`; \
 386           (if test -d "$(DESTDIR)$(infodir)" && cd "$(DESTDIR)$(infodir)"; then \
 387              echo " cd '$(DESTDIR)$(infodir)' && rm -f $$relfile $$relfile-[0-9] $$relfile-[0-9][0-9] $$relfile_i[0-9] $$relfile_i[0-9][0-9]"; \
 388              rm -f $$relfile $$relfile-[0-9] $$relfile-[0-9][0-9] $$relfile_i[0-9] $$relfile_i[0-9][0-9]; \
 389            else :; fi); \
 390         done
 391
 392 uninstall-pdf-am:
 393         @$(NORMAL_UNINSTALL)
 394         @list='$(PDFS)'; test -n "$(pdfdir)" || list=; \
 395         for p in $$list; do \
 396           $(am__strip_dir) \
 397           echo " rm -f '$(DESTDIR)$(pdfdir)/$$f'"; \
 398           rm -f "$(DESTDIR)$(pdfdir)/$$f"; \
 399         done
 400
 401 uninstall-ps-am:
 402         @$(NORMAL_UNINSTALL)
 403         @list='$(PSS)'; test -n "$(psdir)" || list=; \
 404         for p in $$list; do \
 405           $(am__strip_dir) \
 406           echo " rm -f '$(DESTDIR)$(psdir)/$$f'"; \
 407           rm -f "$(DESTDIR)$(psdir)/$$f"; \
 408         done
 409
 410 dist-info: $(INFO_DEPS)
 411         @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
 412         list='$(INFO_DEPS)'; \
 413         for base in $$list; do \
 414           case $$base in \
 415             $(srcdir)/*) base=`echo "$$base" | sed "s|^$$srcdirstrip/||"`;; \
 416           esac; \
 417           if test -f $$base; then d=.; else d=$(srcdir); fi; \
 418           base_i=`echo "$$base" | sed 's|\.info$$||;s|$$|.i|'`; \
 419           for file in $$d/$$base $$d/$$base-[0-9] $$d/$$base-[0-9][0-9] $$d/$$base_i[0-9] $$d/$$base_i[0-9][0-9]; do \
 420             if test -f $$file; then \
 421               relfile=`expr "$$file" : "$$d/\(.*\)"`; \
 422               test -f "$(distdir)/$$relfile" || \
 423                 cp -p $$file "$(distdir)/$$relfile"; \
 424             else :; fi; \
 425           done; \
 426         done
 427
 428 mostlyclean-aminfo:
 429         -rm -rf RNAlib.aux RNAlib.cp RNAlib.cps RNAlib.fn RNAlib.fns RNAlib.ky \
 430           RNAlib.kys RNAlib.log RNAlib.pg RNAlib.pgs RNAlib.tmp \
 431           RNAlib.toc RNAlib.tp RNAlib.tps RNAlib.vr RNAlib.vrs
 432
 433 clean-aminfo:
 434         -test -z "RNAlib.dvi RNAlib.pdf RNAlib.ps RNAlib.html" \
 435         || rm -rf RNAlib.dvi RNAlib.pdf RNAlib.ps RNAlib.html
 436
 437 maintainer-clean-aminfo:
 438         @list='$(INFO_DEPS)'; for i in $$list; do \
 439           i_i=`echo "$$i" | sed 's|\.info$$||;s|$$|.i|'`; \
 440           echo " rm -f $$i $$i-[0-9] $$i-[0-9][0-9] $$i_i[0-9] $$i_i[0-9][0-9]"; \
 441           rm -f $$i $$i-[0-9] $$i-[0-9][0-9] $$i_i[0-9] $$i_i[0-9][0-9]; \
 442         done
 443 install-man1: $(dist_man_MANS)
 444         @$(NORMAL_INSTALL)
 445         @list1=''; \
 446         list2='$(dist_man_MANS)'; \
 447         test -n "$(man1dir)" \
 448           && test -n "`echo $$list1$$list2`" \
 449           || exit 0; \
 450         echo " $(MKDIR_P) '$(DESTDIR)$(man1dir)'"; \
 451         $(MKDIR_P) "$(DESTDIR)$(man1dir)" || exit 1; \
 452         { for i in $$list1; do echo "$$i"; done;  \
 453         if test -n "$$list2"; then \
 454           for i in $$list2; do echo "$$i"; done \
 455             | sed -n '/\.1[a-z]*$$/p'; \
 456         fi; \
 457         } | while read p; do \
 458           if test -f $$p; then d=; else d="$(srcdir)/"; fi; \
 459           echo "$$d$$p"; echo "$$p"; \
 460         done | \
 461         sed -e 'n;s,.*/,,;p;h;s,.*\.,,;s,^[^1][0-9a-z]*$$,1,;x' \
 462               -e 's,\.[0-9a-z]*$$,,;$(transform);G;s,\n,.,' | \
 463         sed 'N;N;s,\n, ,g' | { \
 464         list=; while read file base inst; do \
 465           if test "$$base" = "$$inst"; then list="$$list $$file"; else \
 466             echo " $(INSTALL_DATA) '$$file' '$(DESTDIR)$(man1dir)/$$inst'"; \
 467             $(INSTALL_DATA) "$$file" "$(DESTDIR)$(man1dir)/$$inst" || exit $$?; \
 468           fi; \
 469         done; \
 470         for i in $$list; do echo "$$i"; done | $(am__base_list) | \
 471         while read files; do \
 472           test -z "$$files" || { \
 473             echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(man1dir)'"; \
 474             $(INSTALL_DATA) $$files "$(DESTDIR)$(man1dir)" || exit $$?; }; \
 475         done; }
 476
 477 uninstall-man1:
 478         @$(NORMAL_UNINSTALL)
 479         @list=''; test -n "$(man1dir)" || exit 0; \
 480         files=`{ for i in $$list; do echo "$$i"; done; \
 481         l2='$(dist_man_MANS)'; for i in $$l2; do echo "$$i"; done | \
 482           sed -n '/\.1[a-z]*$$/p'; \
 483         } | sed -e 's,.*/,,;h;s,.*\.,,;s,^[^1][0-9a-z]*$$,1,;x' \
 484               -e 's,\.[0-9a-z]*$$,,;$(transform);G;s,\n,.,'`; \
 485         dir='$(DESTDIR)$(man1dir)'; $(am__uninstall_files_from_dir)
 486 tags: TAGS
 487 TAGS:
 488
 489 ctags: CTAGS
 490 CTAGS:
 491
 492
 493 distdir: $(DISTFILES)
 494         @list='$(MANS)'; if test -n "$$list"; then \
 495           list=`for p in $$list; do \
 496             if test -f $$p; then d=; else d="$(srcdir)/"; fi; \
 497             if test -f "$$d$$p"; then echo "$$d$$p"; else :; fi; done`; \
 498           if test -n "$$list" && \
 499             grep 'ab help2man is required to generate this page' $$list >/dev/null; then \
 500             echo "error: found man pages containing the \`missing help2man' replacement text:" >&2; \
 501             grep -l 'ab help2man is required to generate this page' $$list | sed 's/^/         /' >&2; \
 502             echo "       to fix them, install help2man, remove and regenerate the man pages;" >&2; \
 503             echo "       typically \`make maintainer-clean' will remove them" >&2; \
 504             exit 1; \
 505           else :; fi; \
 506         else :; fi
 507         @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
 508         topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
 509         list='$(DISTFILES)'; \
 510           dist_files=`for file in $$list; do echo $$file; done | \
 511           sed -e "s|^$$srcdirstrip/||;t" \
 512               -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
 513         case $$dist_files in \
 514           */*) $(MKDIR_P) `echo "$$dist_files" | \
 515                            sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
 516                            sort -u` ;; \
 517         esac; \
 518         for file in $$dist_files; do \
 519           if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 520           if test -d $$d/$$file; then \
 521             dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
 522             if test -d "$(distdir)/$$file"; then \
 523               find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
 524             fi; \
 525             if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
 526               cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
 527               find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
 528             fi; \
 529             cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
 530           else \
 531             test -f "$(distdir)/$$file" \
 532             || cp -p $$d/$$file "$(distdir)/$$file" \
 533             || exit 1; \
 534           fi; \
 535         done
 536         $(MAKE) $(AM_MAKEFLAGS) \
 537           top_distdir="$(top_distdir)" distdir="$(distdir)" \
 538           dist-info
 539 check-am: all-am
 540 check: check-am
 541 all-am: Makefile $(INFO_DEPS) $(MANS)
 542 installdirs:
 543         for dir in "$(DESTDIR)$(infodir)" "$(DESTDIR)$(man1dir)"; do \
 544           test -z "$$dir" || $(MKDIR_P) "$$dir"; \
 545         done
 546 install: install-am
 547 install-exec: install-exec-am
 548 install-data: install-data-am
 549 uninstall: uninstall-am
 550
 551 install-am: all-am
 552         @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
 553
 554 installcheck: installcheck-am
 555 install-strip:
 556         if test -z '$(STRIP)'; then \
 557           $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
 558             install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 559               install; \
 560         else \
 561           $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
 562             install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 563             "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
 564         fi
 565 mostlyclean-generic:
 566
 567 clean-generic:
 568
 569 distclean-generic:
 570         -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 571         -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
 572
 573 maintainer-clean-generic:
 574         @echo "This command is intended for maintainers to use"
 575         @echo "it deletes files that may require special tools to rebuild."
 576 clean: clean-am
 577
 578 clean-am: clean-aminfo clean-generic mostlyclean-am
 579
 580 distclean: distclean-am
 581         -rm -f Makefile
 582 distclean-am: clean-am distclean-generic
 583
 584 dvi: dvi-am
 585
 586 dvi-am: $(DVIS)
 587
 588 html: html-am
 589
 590 html-am: $(HTMLS)
 591
 592 info: info-am
 593
 594 info-am: $(INFO_DEPS)
 595
 596 install-data-am: install-info-am install-man
 597
 598 install-dvi: install-dvi-am
 599
 600 install-dvi-am: $(DVIS)
 601         @$(NORMAL_INSTALL)
 602         @list='$(DVIS)'; test -n "$(dvidir)" || list=; \
 603         if test -n "$$list"; then \
 604           echo " $(MKDIR_P) '$(DESTDIR)$(dvidir)'"; \
 605           $(MKDIR_P) "$(DESTDIR)$(dvidir)" || exit 1; \
 606         fi; \
 607         for p in $$list; do \
 608           if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
 609           echo "$$d$$p"; \
 610         done | $(am__base_list) | \
 611         while read files; do \
 612           echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(dvidir)'"; \
 613           $(INSTALL_DATA) $$files "$(DESTDIR)$(dvidir)" || exit $$?; \
 614         done
 615 install-exec-am:
 616
 617 install-html: install-html-am
 618
 619 install-html-am: $(HTMLS)
 620         @$(NORMAL_INSTALL)
 621         @list='$(HTMLS)'; list2=; test -n "$(htmldir)" || list=; \
 622         if test -n "$$list"; then \
 623           echo " $(MKDIR_P) '$(DESTDIR)$(htmldir)'"; \
 624           $(MKDIR_P) "$(DESTDIR)$(htmldir)" || exit 1; \
 625         fi; \
 626         for p in $$list; do \
 627           if test -f "$$p" || test -d "$$p"; then d=; else d="$(srcdir)/"; fi; \
 628           $(am__strip_dir) \
 629           d2=$$d$$p; \
 630           if test -d "$$d2"; then \
 631             echo " $(MKDIR_P) '$(DESTDIR)$(htmldir)/$$f'"; \
 632             $(MKDIR_P) "$(DESTDIR)$(htmldir)/$$f" || exit 1; \
 633             echo " $(INSTALL_DATA) '$$d2'/* '$(DESTDIR)$(htmldir)/$$f'"; \
 634             $(INSTALL_DATA) "$$d2"/* "$(DESTDIR)$(htmldir)/$$f" || exit $$?; \
 635           else \
 636             list2="$$list2 $$d2"; \
 637           fi; \
 638         done; \
 639         test -z "$$list2" || { echo "$$list2" | $(am__base_list) | \
 640         while read files; do \
 641           echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(htmldir)'"; \
 642           $(INSTALL_DATA) $$files "$(DESTDIR)$(htmldir)" || exit $$?; \
 643         done; }
 644 install-info: install-info-am
 645
 646 install-info-am: $(INFO_DEPS)
 647         @$(NORMAL_INSTALL)
 648         @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
 649         list='$(INFO_DEPS)'; test -n "$(infodir)" || list=; \
 650         if test -n "$$list"; then \
 651           echo " $(MKDIR_P) '$(DESTDIR)$(infodir)'"; \
 652           $(MKDIR_P) "$(DESTDIR)$(infodir)" || exit 1; \
 653         fi; \
 654         for file in $$list; do \
 655           case $$file in \
 656             $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
 657           esac; \
 658           if test -f $$file; then d=.; else d=$(srcdir); fi; \
 659           file_i=`echo "$$file" | sed 's|\.info$$||;s|$$|.i|'`; \
 660           for ifile in $$d/$$file $$d/$$file-[0-9] $$d/$$file-[0-9][0-9] \
 661                        $$d/$$file_i[0-9] $$d/$$file_i[0-9][0-9] ; do \
 662             if test -f $$ifile; then \
 663               echo "$$ifile"; \
 664             else : ; fi; \
 665           done; \
 666         done | $(am__base_list) | \
 667         while read files; do \
 668           echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(infodir)'"; \
 669           $(INSTALL_DATA) $$files "$(DESTDIR)$(infodir)" || exit $$?; done
 670         @$(POST_INSTALL)
 671         @if $(am__can_run_installinfo); then \
 672           list='$(INFO_DEPS)'; test -n "$(infodir)" || list=; \
 673           for file in $$list; do \
 674             relfile=`echo "$$file" | sed 's|^.*/||'`; \
 675             echo " install-info --info-dir='$(DESTDIR)$(infodir)' '$(DESTDIR)$(infodir)/$$relfile'";\
 676             install-info --info-dir="$(DESTDIR)$(infodir)" "$(DESTDIR)$(infodir)/$$relfile" || :;\
 677           done; \
 678         else : ; fi
 679 install-man: install-man1
 680
 681 install-pdf: install-pdf-am
 682
 683 install-pdf-am: $(PDFS)
 684         @$(NORMAL_INSTALL)
 685         @list='$(PDFS)'; test -n "$(pdfdir)" || list=; \
 686         if test -n "$$list"; then \
 687           echo " $(MKDIR_P) '$(DESTDIR)$(pdfdir)'"; \
 688           $(MKDIR_P) "$(DESTDIR)$(pdfdir)" || exit 1; \
 689         fi; \
 690         for p in $$list; do \
 691           if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
 692           echo "$$d$$p"; \
 693         done | $(am__base_list) | \
 694         while read files; do \
 695           echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(pdfdir)'"; \
 696           $(INSTALL_DATA) $$files "$(DESTDIR)$(pdfdir)" || exit $$?; done
 697 install-ps: install-ps-am
 698
 699 install-ps-am: $(PSS)
 700         @$(NORMAL_INSTALL)
 701         @list='$(PSS)'; test -n "$(psdir)" || list=; \
 702         if test -n "$$list"; then \
 703           echo " $(MKDIR_P) '$(DESTDIR)$(psdir)'"; \
 704           $(MKDIR_P) "$(DESTDIR)$(psdir)" || exit 1; \
 705         fi; \
 706         for p in $$list; do \
 707           if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
 708           echo "$$d$$p"; \
 709         done | $(am__base_list) | \
 710         while read files; do \
 711           echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(psdir)'"; \
 712           $(INSTALL_DATA) $$files "$(DESTDIR)$(psdir)" || exit $$?; done
 713 installcheck-am:
 714
 715 maintainer-clean: maintainer-clean-am
 716         -rm -f Makefile
 717 maintainer-clean-am: distclean-am maintainer-clean-aminfo \
 718         maintainer-clean-generic maintainer-clean-local
 719
 720 mostlyclean: mostlyclean-am
 721
 722 mostlyclean-am: mostlyclean-aminfo mostlyclean-generic
 723
 724 pdf: pdf-am
 725
 726 pdf-am: $(PDFS)
 727
 728 ps: ps-am
 729
 730 ps-am: $(PSS)
 731
 732 uninstall-am: uninstall-dvi-am uninstall-html-am uninstall-info-am \
 733         uninstall-man uninstall-pdf-am uninstall-ps-am
 734
 735 uninstall-man: uninstall-man1
 736
 737 .MAKE: install-am install-strip
 738
 739 .PHONY: all all-am check check-am clean clean-aminfo clean-generic \
 740         dist-info distclean distclean-generic distdir dvi dvi-am html \
 741         html-am info info-am install install-am install-data \
 742         install-data-am install-dvi install-dvi-am install-exec \
 743         install-exec-am install-html install-html-am install-info \
 744         install-info-am install-man install-man1 install-pdf \
 745         install-pdf-am install-ps install-ps-am install-strip \
 746         installcheck installcheck-am installdirs maintainer-clean \
 747         maintainer-clean-aminfo maintainer-clean-generic \
 748         maintainer-clean-local mostlyclean mostlyclean-aminfo \
 749         mostlyclean-generic pdf pdf-am ps ps-am uninstall uninstall-am \
 750         uninstall-dvi-am uninstall-html-am uninstall-info-am \
 751         uninstall-man uninstall-man1 uninstall-pdf-am uninstall-ps-am
 752
 753
 754 # remove all generated man pages
 755 maintainer-clean-local:
 756         -rm -f $(dist_man_MANS)
 757
 758 RNA2Dfold.1:  ../Progs/RNA2Dfold.ggo
 759         ./help2man -N --help-option=--detailed-help\
 760                 --opt-include=./include/ref_package.inc\
 761                 --opt-include=./include/RNA2Dfold.inc\
 762                 --opt-include=./include/ref_energy_par.inc\
 763                 "./cmdlopt.sh ../Progs/RNA2Dfold.ggo" > RNA2Dfold.1
 764
 765 RNAaliduplex.1:  ../Progs/RNAaliduplex.ggo
 766         ./help2man -N --help-option=--detailed-help\
 767                 --opt-include=./include/ref_package.inc\
 768                 --opt-include=./include/RNAaliduplex.inc\
 769                 --opt-include=./include/ref_energy_par.inc\
 770                 "./cmdlopt.sh ../Progs/RNAaliduplex.ggo" > RNAaliduplex.1
 771
 772 RNAalifold.1:  ../Progs/RNAalifold.ggo
 773         ./help2man -N --help-option=--detailed-help\
 774                 --opt-include=./include/ref_package.inc\
 775                 --opt-include=./include/RNAalifold.inc\
 776                 --opt-include=./include/ref_energy_par.inc\
 777                 "./cmdlopt.sh ../Progs/RNAalifold.ggo" > RNAalifold.1
 778
 779 RNAcofold.1:  ../Progs/RNAcofold.ggo
 780         ./help2man -N --help-option=--detailed-help\
 781                 --opt-include=./include/ref_package.inc\
 782                 --opt-include=./include/RNAcofold.inc\
 783                 --opt-include=./include/ref_energy_par.inc\
 784                 "./cmdlopt.sh ../Progs/RNAcofold.ggo" > RNAcofold.1
 785
 786 RNAduplex.1:  ../Progs/RNAduplex.ggo
 787         ./help2man -N --help-option=--detailed-help\
 788                 --opt-include=./include/ref_package.inc\
 789                 --opt-include=./include/RNAduplex.inc\
 790                 --opt-include=./include/ref_energy_par.inc\
 791                 "./cmdlopt.sh ../Progs/RNAduplex.ggo" > RNAduplex.1
 792
 793 RNAeval.1:  ../Progs/RNAeval.ggo
 794         ./help2man -N --help-option=--detailed-help\
 795                 --opt-include=./include/ref_package.inc\
 796                 --opt-include=./include/RNAeval.inc\
 797                 --opt-include=./include/ref_energy_par.inc\
 798                 "./cmdlopt.sh ../Progs/RNAeval.ggo" > RNAeval.1
 799
 800 RNAfold.1:  ../Progs/RNAfold.ggo
 801         ./help2man -N --help-option=--detailed-help\
 802                 --opt-include=./include/ref_package.inc\
 803                 --opt-include=./include/RNAfold.inc\
 804                 --opt-include=./include/ref_energy_par.inc\
 805                 "./cmdlopt.sh ../Progs/RNAfold.ggo" > RNAfold.1
 806
 807 RNAheat.1:  ../Progs/RNAheat.ggo
 808         ./help2man -N --help-option=--detailed-help\
 809                 --opt-include=./include/ref_package.inc\
 810                 --opt-include=./include/RNAheat.inc\
 811                 --opt-include=./include/ref_energy_par.inc\
 812                 "./cmdlopt.sh ../Progs/RNAheat.ggo" > RNAheat.1
 813
 814 RNAinverse.1:  ../Progs/RNAinverse.ggo
 815         ./help2man -N --help-option=--detailed-help\
 816                 --opt-include=./include/ref_package.inc\
 817                 --opt-include=./include/RNAinverse.inc\
 818                 --opt-include=./include/ref_energy_par.inc\
 819                 "./cmdlopt.sh ../Progs/RNAinverse.ggo" > RNAinverse.1
 820
 821 RNALalifold.1:  ../Progs/RNALalifold.ggo
 822         ./help2man -N --help-option=--detailed-help\
 823                 --opt-include=./include/ref_package.inc\
 824                 --opt-include=./include/RNAalifold.inc\
 825                 --opt-include=./include/ref_energy_par.inc\
 826                 "./cmdlopt.sh ../Progs/RNALalifold.ggo" > RNALalifold.1
 827
 828 RNALfold.1:  ../Progs/RNALfold.ggo
 829         ./help2man -N --help-option=--detailed-help\
 830                 --opt-include=./include/ref_package.inc\
 831                 --opt-include=./include/RNALfold.inc\
 832                 --opt-include=./include/ref_energy_par.inc\
 833                 "./cmdlopt.sh ../Progs/RNALfold.ggo" > RNALfold.1
 834
 835 RNApaln.1:  ../Progs/RNApaln.ggo
 836         ./help2man -N --help-option=--detailed-help\
 837                 --opt-include=./include/ref_package.inc\
 838                 --opt-include=./include/RNApaln.inc\
 839                 --opt-include=./include/ref_energy_par.inc\
 840                 "./cmdlopt.sh ../Progs/RNApaln.ggo" > RNApaln.1
 841
 842 RNAparconv.1:  ../Progs/RNAparconv.ggo
 843         ./help2man -N --help-option=--detailed-help\
 844                 --opt-include=./include/ref_package.inc\
 845                 --opt-include=./include/RNAparconv.inc\
 846                 --opt-include=./include/ref_energy_par.inc\
 847                 "./cmdlopt.sh ../Progs/RNAparconv.ggo" > RNAparconv.1
 848
 849 RNAplfold.1:  ../Progs/RNAplfold.ggo
 850         ./help2man -N --help-option=--detailed-help\
 851                 --opt-include=./include/ref_package.inc\
 852                 --opt-include=./include/RNAplfold.inc\
 853                 --opt-include=./include/ref_energy_par.inc\
 854                 "./cmdlopt.sh ../Progs/RNAplfold.ggo" > RNAplfold.1
 855
 856 RNAplot.1:  ../Progs/RNAplot.ggo
 857         ./help2man -N --help-option=--detailed-help\
 858                 --opt-include=./include/ref_package.inc\
 859                 --opt-include=./include/RNAplot.inc\
 860                 "./cmdlopt.sh ../Progs/RNAplot.ggo" > RNAplot.1
 861
 862 RNAsubopt.1:  ../Progs/RNAsubopt.ggo
 863         ./help2man -N --help-option=--detailed-help\
 864                 --opt-include=./include/ref_package.inc\
 865                 --opt-include=./include/RNAsubopt.inc\
 866                 --opt-include=./include/ref_energy_par.inc\
 867                 "./cmdlopt.sh ../Progs/RNAsubopt.ggo" > RNAsubopt.1
 868
 869 RNAup.1:  ../Progs/RNAup.ggo
 870         ./help2man -N --help-option=--detailed-help\
 871                 --opt-include=./include/ref_package.inc\
 872                 --opt-include=./include/RNAup.inc\
 873                 --opt-include=./include/ref_energy_par.inc\
 874                 "./cmdlopt.sh ../Progs/RNAup.ggo" > RNAup.1
 875
 876 RNAplex.1:  ../Progs/RNAplex.ggo
 877         ./help2man -N --help-option=--detailed-help\
 878                 --opt-include=./include/ref_package.inc\
 879                 --opt-include=./include/RNAplex.inc\
 880                 --opt-include=./include/ref_energy_par.inc\
 881                 "./cmdlopt.sh ../Progs/RNAplex.ggo" > RNAplex.1
 882
 883 RNAPKplex.1:  ../Progs/RNAPKplex.ggo
 884         ./help2man -N --help-option=--detailed-help\
 885                 --opt-include=./include/ref_package.inc\
 886                 --opt-include=./include/RNAPKplex.inc\
 887                 --opt-include=./include/ref_energy_par.inc\
 888                 "./cmdlopt.sh ../Progs/RNAPKplex.ggo" > RNAPKplex.1
 889
 890 RNAsnoop.1:  ../Progs/RNAsnoop.ggo
 891         ./help2man -N --help-option=--detailed-help\
 892                 --opt-include=./include/ref_package.inc\
 893                 --opt-include=./include/RNAsnoop.inc\
 894                 --opt-include=./include/ref_energy_par.inc\
 895                 "./cmdlopt.sh ../Progs/RNAsnoop.ggo" > RNAsnoop.1
 896
 897 RNAdistance.1:  ../Progs/RNAdistance.ggo
 898         ./help2man -N --help-option=--detailed-help\
 899                 --opt-include=./include/ref_package.inc\
 900                 --opt-include=./include/RNAdistance.inc\
 901                 "./cmdlopt.sh ../Progs/RNAdistance.ggo" > RNAdistance.1
 902
 903 RNApdist.1:  ../Progs/RNApdist.ggo
 904         ./help2man -N --help-option=--detailed-help\
 905                 --opt-include=./include/ref_package.inc\
 906                 --opt-include=./include/RNApdist.inc\
 907                 --opt-include=./include/ref_energy_par.inc\
 908                 "./cmdlopt.sh ../Progs/RNApdist.ggo" > RNApdist.1
 909
 910 # Tell versions [3.59,3.63) of GNU make to not export all variables.
 911 # Otherwise a system limit (for SysV at least) may be exceeded.
 912 .NOEXPORT: