JAL-1953 2.11.2 with Archeopteryx!
authorJim Procter <j.procter@dundee.ac.uk>
Fri, 3 Jun 2022 10:37:14 +0000 (11:37 +0100)
committerJim Procter <j.procter@dundee.ac.uk>
Fri, 3 Jun 2022 11:24:33 +0000 (12:24 +0100)
commit4a3def9f59cefe629c9a33d87483283aee085928
treee4a3e05d86008c141fe0e1055087931ecc7b4e77
parenteca4795050a0f7eca3d5dece68eaa54987cebd15
parent914a9aaf5a2eeb3cdedf136c2e6b4b6e4b5d6174
JAL-1953 2.11.2 with Archeopteryx!
Minimal patches and Merge branch 'kjvdh/features/PhylogenyViewer' into merge/2_11_2/PhylogenyViewer
also restored last kjvdh build of forester to j8 and j11lib directories
 Conflicts:
.classpath
j8lib/forester.jar
resources/lang/Messages.properties
src/jalview/ext/rbvi/chimera/JalviewChimeraBinding.java
src/jalview/fts/core/GFTSPanel.java
src/jalview/fts/service/pdb/PDBFTSPanel.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/DasSourceBrowser.java
src/jalview/gui/Desktop.java
src/jalview/gui/PopupMenu.java
src/jalview/gui/SplashScreen.java
src/jalview/gui/StructureViewerBase.java
src/jalview/io/BioJsHTMLOutput.java
src/jalview/io/FileLoader.java
src/jalview/io/HtmlSvgOutput.java
src/jalview/project/Jalview2XML.java
src/jalview/schemabinding/version2/JalviewModelSequence.java
src/jalview/util/DBRefUtils.java
src/jalview/viewmodel/AlignmentViewport.java
src/jalview/ws/DBRefFetcher.java
src/jalview/ws/DasSequenceFeatureFetcher.java
src/jalview/ws/jws2/Jws2Discoverer.java
utils/jalviewjs/buildxml/build.xml
38 files changed:
j11lib/forester.jar
j8lib/forester.jar
resources/lang/Messages.properties
src/jalview/analysis/AlignmentSorter.java
src/jalview/appletgui/OverviewPanel.java
src/jalview/appletgui/PCAPanel.java
src/jalview/bin/Jalview.java
src/jalview/ext/archaeopteryx/AptxFrame.java
src/jalview/ext/treeviewer/JalviewBinding.java
src/jalview/fts/core/GFTSPanel.java
src/jalview/fts/service/pdb/PDBFTSPanel.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/AlignViewport.java
src/jalview/gui/AppJmol.java
src/jalview/gui/CalculationChooser.java
src/jalview/gui/ChimeraViewFrame.java
src/jalview/gui/Console.java
src/jalview/gui/Desktop.java
src/jalview/gui/JalviewDialog.java
src/jalview/gui/OverviewPanel.java
src/jalview/gui/RedundancyPanel.java
src/jalview/gui/StructureViewerBase.java
src/jalview/gui/TreeCanvas.java
src/jalview/gui/VamsasApplication.java
src/jalview/gui/WebserviceInfo.java
src/jalview/gui/WsPreferences.java
src/jalview/io/FileFormat.java
src/jalview/io/FileLoader.java
src/jalview/io/IdentifyFile.java
src/jalview/jbgui/GAlignFrame.java
src/jalview/project/Jalview2XML.java
src/jalview/util/AWTConsole.java
src/jalview/util/DBRefUtils.java
src/jalview/util/MappingUtils.java
src/jalview/viewmodel/AlignmentViewport.java
src/jalview/ws/DBRefFetcher.java
src/jalview/ws/jws2/Jws2Discoverer.java
test/jalview/gui/FreeUpMemoryTest.java