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Jalview-JS/JAL-3253-applet JAL-3266 Varna fix.
[jalview.git]
/
lib
/
2019-03-29
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-03-29
gmungoc
JAL-3140 intervalstore now v1.0 (public release)
tree
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commitdiff
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-03-07
gmungoc
JAL-3035 removed spring libraries as only used for...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'feature/intervalStoreJ' into merge/JAL...
tree
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commitdiff
2019-03-01
gmungoc
JAL-3140 reduced coupling to intervalstore.jar
feature/intervalStoreJ
tree
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commitdiff
2019-02-07
gmungoc
JAL-3140 updated to latest intervalstore.jar
tree
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commitdiff
2018-12-03
gmungoc
JAL-3063 Castor removed from codebase
tree
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commitdiff
2018-11-29
gmungoc
JAL-3140 updated IntervalStore jar
tree
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commitdiff
2018-11-29
gmungoc
JAL-3140 named tagged version of intervalstore.jar
tree
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commitdiff
2018-10-17
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into Jalview-BH...
tree
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commitdiff
2018-09-11
Jim Procter
JAL-3111 drop hts-1.33 as a dependency (in favour of...
tree
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commitdiff
2018-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_Branch
tree
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commitdiff
2018-09-07
Jim Procter
JAL-2988 JAL-2968 renamed patched VAqua5 to VAqua5...
tree
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commitdiff
2018-09-07
Jim Procter
JAL-3105 fix for focus transfer after window closed...
tree
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commitdiff
2018-08-22
Jim Procter
JAL-2988 JAL-2976 update to latest VAqua release: VAqua5
tree
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commitdiff
2018-07-22
hansonr
JAL-3026 upgrades Jmol to 14.29.17 for Java.
tree
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commitdiff
2018-06-27
hansonr
JAL-3032 just the changes pulled already
tree
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commitdiff
2018-06-26
Jim Procter
JAL-3035 - jalview-das is no more !
tree
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commitdiff
2018-05-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-05-02
Jim Procter
JAL-2976 Vaqua(4) as a dependency
tree
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commitdiff
2017-11-15
gmungoc
JAL-2835 spike updated with latest
tree
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commitdiff
2017-11-13
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
tree
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commitdiff
2017-11-13
Jim Procter
JAL-2702 update to groovy 2.4.12
tree
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commitdiff
2017-10-20
gmungoc
Push 1793 latest to spike branch
tree
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commitdiff
2017-10-06
gmungoc
JAL-2753 add new jar to lib folder!
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-09-04
Jim Procter
JAL-2549 update JABAWS 2.2 library to client that repor...
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-05-23
Jim Procter
JAL-2549 replace JABAWS 2.1 with 2.2 client and remove...
tree
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commitdiff
2016-11-16
Jim Procter
JAL-2177 remove signature from desktop library Jmol jar
tree
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commitdiff
2016-10-27
tcofoegbu
JAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11...
tree
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commitdiff
2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
tree
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commitdiff
2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
tree
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commitdiff
2016-05-04
gmungoc
JAL-2074 reinstated xerces-impl.jar
tree
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commitdiff
2016-05-04
Jim Procter
Revert "JAL-2074 removed xerces to explore wierdness"
tree
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commitdiff
2016-04-26
Jim Procter
Merge branch 'develop' into groovy/JAL-2074_upgradeto2.4.4
groovy/JAL-2074_upgradeto2.4.4
tree
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commitdiff
2016-04-26
Jim Procter
JAL-2080 removed all 'Class-Path' references in libs
tree
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commitdiff
2016-04-26
Jim Procter
JAL-2080 removed classpath references to Xerces and...
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 removed xerces to explore wierdness
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 reinstate upgrade to groovy 2.8.4-indy
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 reinstate upgrade to groovy 2.8.4-indy
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 add the groovy 1.8.2 library back to classpath
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 backed out groovy upgrade - back to 1.8.2
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 groovy-all didn’t get added :q
tree
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commitdiff
2016-04-25
Jim Procter
JAL-2074 switch to non-indy groovy to see if class...
tree
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commitdiff
2016-04-20
Jim Procter
JAL-2074 updated groovy-all to 2.4.6-indy
tree
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commitdiff
2015-12-22
gmungoc
JAL-1191 SequenceOntology wrapping/caching SO.OBO via...
tree
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commitdiff
2015-10-15
Jim Procter
Merge branch 'develop' into features/JAL-653_JAL-1766_h...
tree
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commitdiff
2015-06-26
gmungoc
JAL-1759 updates for Jmol 14.2.14_25.06.11
tree
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commitdiff
2015-06-22
gmungoc
JAL-893 upgrade to VARNAv3-93.jar
tree
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commitdiff
2015-06-12
Jim Procter
JAL-1766 update HTSJDK to Version 1.133
tree
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commitdiff
2015-06-08
Jim Procter
JAL-1766 added a snapshot build of the htsjdk
tree
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commitdiff
2015-06-02
tcofoegbu
JAL-1641 applet build fix
tree
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commitdiff
2015-05-27
tcofoegbu
Removed redundant classes and dependencies pulled in...
tree
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commitdiff
2015-05-21
tcofoegbu
JAL-1740 implemented auto-update of BioJsMSA, introduce...
features/JAL-1740_BioJsAutoUpdater
tree
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commitdiff
2015-05-05
gmungoc
JAL-1725 first version of Jetty server / chimera select...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-02-26
Charles Ofoegbu
JAL-1667 PDBe Search Interface implementation
tree
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commitdiff
2015-02-06
Jim Procter
Merge branch 'bug/JAL-1643_File-chooser-improvement...
tree
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commitdiff
2015-02-05
Charles Ofoegbu
merge commit
tree
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commitdiff
2015-02-05
Jim Procter
JAL-1643 jarred up the quaqua native libraries and...
tree
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commitdiff
2015-02-05
Jim Procter
JAL-1643 correct version of quaqua (8) plus THIRDPARTYL...
tree
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commitdiff
2015-02-05
Jim Procter
JAL-1643 renamed quaqua library to add version number
tree
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commitdiff
2015-02-04
Charles Ofoegbu
JAL-1643 Modified JalviewFileChooser to have a more...
tree
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commitdiff
2014-11-13
Jim Procter
Merge branch 'features/JAL-1469_svg-output-for-figure...
tree
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commitdiff
2014-11-12
Charles Ofoegbu
Added support for SVG Export
tree
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commitdiff
2014-10-31
Charles Ofoegbu
JAL-1541 upadated BioJs emmitter to store alignment...
tree
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commitdiff
2014-10-23
Jim Procter
Merge branch 'hotfix/JAL-1521' into Release_2_8_2_Branch
tree
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commitdiff
2014-10-23
Jim Procter
Merge branch 'hotfix/JAL-1521' into develop
tree
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commitdiff
2014-10-23
unknown
JAL-1521 updated xerces to 2.11 along with xml-apis
tree
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commitdiff
2014-10-23
Jim Procter
JAL-1521 patch is to remove xerces from classpath....
tree
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commitdiff
2014-10-21
Jim Procter
JAL-1216 update to VARNA 3.91
tree
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commitdiff
2014-07-22
j.procter@dundee...
JAL-1333 add log4j-slf4j bridge
tree
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commitdiff
2014-07-04
j.procter@dundee...
JAL-1333 more abstraction and refactoring and working...
tree
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commitdiff
2013-11-25
Jim Procter
Merge branch 'JAL-1139_proguard' into develop
tree
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commitdiff
2013-11-25
Jim Procter
Merge branch 'JAL-1139_proguard' into Release_2_8_1_Branch
tree
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commitdiff
2013-11-25
Jim Procter
JAL-1139 specified SHA1WithRSA for sig algorithm and...
tree
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commitdiff
2013-10-15
Jim Procter
JAL-1159 Merging 2.8.1 patches and Anne Menards work...
tree
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commitdiff
2013-10-14
Jim Procter
Merge branch 'develop' into dev_from_2_8_1
tree
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commitdiff
2013-10-08
Jim Procter
reindexed Jmol jar with 'jar -i' to fix JAL-1389
tree
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commitdiff
2013-10-04
Jim Procter
JAL-1378 JWS-71 update to from-source build of JABA...
tree
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commitdiff
2013-09-02
Jim Procter
JAL-1358 remove old v2 jaba min-client
tree
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commitdiff
2013-08-31
Daniel Barton
Brief html documentation entry for RNAalifold under...
tree
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commitdiff
2013-08-30
Daniel Barton
JAL-1358 Cleaned up RNAalifoldClient.java. RNA helices...
tree
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commitdiff
2013-08-28
Daniel Barton
RNAalifoldClient updated to be more like AAConClient...
tree
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 jalview displays some RNA struture annotation...
tree
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commitdiff
2013-02-13
jprocter
JAL-1216 switch to official release of VARNA 3.9
tree
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commitdiff
2013-02-11
jprocter
json simple library
tree
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commitdiff
2012-12-04
jprocter
JAL-1216 switch to official release of VARNA 3.9
tree
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commitdiff
2012-07-16
Anne Menard
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2012-07-10
Anne Menard
v2
tree
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commitdiff
2012-07-05
Anne Menard
Add support RNAML format
tree
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commitdiff
2012-06-26
jprocter
JAL-899 added groovy support to develop branch
tree
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commitdiff
2012-03-30
jprocter
Merge branch 'JAL-972-dasobert-to-jdas' into JAL-972...
tree
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commitdiff
2012-03-30
jprocter
(JAL-972) jdas latest build
tree
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commitdiff
2012-03-01
jprocter
(JAL-893) update to VARNAv3.9-dev version
tree
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commitdiff
2012-03-01
jprocter
revised version of Jdas with simpler connectionProperty...
tree
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commitdiff
2012-02-29
jprocter
update to latest build
tree
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commitdiff
2012-02-29
jprocter
jdas runtime dependencies
tree
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commitdiff
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