source.jalview.org Git - jalview.git/history - src/jalview/analysis/NJTree.java

git://source.jalview.org / jalview.git / history

[jalview.git] / src / jalview / analysis / NJTree.java

2006-12-06	jprocter	general pairwise substitution score models for pairwise...	blob \| commitdiff
2006-12-05	amwaterhouse	sequence is char []	blob \| commitdiff \| diff to current
2006-11-21	jprocter	fix unselectable tree leaf nodes when node mapping...	blob \| commitdiff \| diff to current
2006-10-12	amwaterhouse	Comment out debug to compile applet	blob \| commitdiff \| diff to current
2006-10-10	jprocter	debug message bugfix on duplicate tree leaf names.	blob \| commitdiff \| diff to current
2006-10-10	jprocter	bugfix for dodgy trees which contain the same leafname...	blob \| commitdiff \| diff to current
2006-10-09	jprocter	imported Vamsas bindings and alpha vamsas client code...	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-04	jprocter	recover original data for tree and pca as alignment...	blob \| commitdiff \| diff to current
2006-07-27	amwaterhouse	Sends gapChar to seqData	blob \| commitdiff \| diff to current
2006-07-26	jprocter	Implemented CIGAR representation of an Alignment view...	blob \| commitdiff \| diff to current
2006-07-21	amwaterhouse	this.seqs = seqs	blob \| commitdiff \| diff to current
2006-07-21	amwaterhouse	Load tree from file constructor fixed	blob \| commitdiff \| diff to current
2006-07-19	amwaterhouse	Original tree data output in PFAM format	blob \| commitdiff \| diff to current
2006-07-18	amwaterhouse	Works on strings, not seqs	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	hasDistances added	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	after merge	blob \| commitdiff \| diff to current
2005-11-18	jprocter	Fixed bug dragonfly.compbio.dundee.ac.uk/mantis/view...	blob \| commitdiff \| diff to current
2005-10-03	amwaterhouse	Remove redundancy from eclipse	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Restore file before eclipse changes	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-06-30	amwaterhouse	Formatting changes	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Formatted source	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	GPL license added	blob \| commitdiff \| diff to current
2005-06-03	jprocter	Reinstated 'create tree from selected region only'...	blob \| commitdiff \| diff to current
2005-05-25	jprocter	tidied up system.out messages and moved many to stderr.	blob \| commitdiff \| diff to current
2005-05-24	jprocter	extended the UpdatePlaceholders to check for any new...	blob \| commitdiff \| diff to current
2005-05-24	jprocter	added PropertyChangeListeners for alignviewport.alignme...	blob \| commitdiff \| diff to current
2005-05-20	jprocter	added tree node property for sequence placeholders.	blob \| commitdiff \| diff to current
2005-05-19	amwaterhouse	toString () method added	blob \| commitdiff \| diff to current
2005-05-05	jprocter	Moved tree leafname to alignment set matching into...	blob \| commitdiff \| diff to current
2005-05-03	amwaterhouse	1.1 compatible	blob \| commitdiff \| diff to current
2005-03-18	jprocter	New constructors for turning NewickFile objects into...	blob \| commitdiff \| diff to current
2005-03-08	jprocter	fixed so that alignment percentage ID is used for dista...	blob \| commitdiff \| diff to current
2004-11-02	amwaterhouse	Jalview Imported Sources start	blob \| commitdiff \| diff to current

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