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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog
[jalview.git]
/
src
/
jalview
/
appletgui
/
SeqPanel.java
2020-06-09
BobHanson
JAL-3446 from applet; JAL-3374
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commitdiff
2019-10-08
gmungoc
Merge branch 'develop' into Jalview-JS/develop
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2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
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diff to current
2019-06-06
gmungoc
Merge branch 'develop' into trialMerge
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diff to current
2019-06-05
tva
JAL-3285 method call name change to SeqPanel not includ...
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2019-06-04
Jim Procter
Merge branch 'develop' into developtomchmmer
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diff to current
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
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diff to current
2019-02-19
gmungoc
JAL-3187 hacks to get peptide variant in to Jmol hover...
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diff to current
2019-01-21
hansonr
isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
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diff to current
2019-01-21
hansonr
removing indirect references to Platform.isAMac()
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2018-03-16
gmungoc
Merge branch 'develop' into trialMerge
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diff to current
2018-03-07
gmungoc
JAL-2629 storage and lifecycle of alignment/group HMM...
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2018-01-19
kiramt
JAL-2759 Changes to getVisibleSequenceStrings after...
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2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
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2017-11-22
gmungoc
JAL-2069 spike updated with latest (FeatureTypeSettings)
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diff to current
2017-11-15
kiramt
JAL-2831 ported to applet
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diff to current
2017-11-02
gmungoc
JAL-2808 spike updated with latest
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2017-10-27
gmungoc
JAL-2526 updated javadoc
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commitdiff
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2017-10-24
gmungoc
JAL-2738 update spike branch with latest
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2017-10-12
Jim Procter
JAL-2773 add new flag to paintAlignment(updateOverview...
features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-09-05
Jim Procter
Merge branch 'master' into portforward/JAL-2675_2102b1t...
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2017-09-04
kiramt
JAL-2673 turn off update to running flag from scrollUp...
bug/JAL-2673
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2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
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2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-07-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-07-28
gmungoc
JAL-147 corrected status bar message for wrapped scroll...
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2017-07-24
gmungoc
spike branch updated from latest features/JAL-2446
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2017-07-19
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-06-29
gmungoc
JAL-147 improved wrapped scrolling (including Overview...
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diff to current
2017-06-29
gmungoc
JAL-2605 exclude left/right scale in sequence column...
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2017-06-27
gmungoc
JAL-1858 repaint after Amend Features dialog
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diff to current
2017-06-27
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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diff to current
2017-06-06
kiramt
JAL-2591 Removed getHiddenRegions()==null checks which...
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2017-06-01
gmungoc
JAL-2754 Sequence.findFeatures(fromCol, toCol)
features/JAL-2754findFeaturesByColumn
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2017-05-31
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-31
gmungoc
JAL-2547 handle contact features 'around' a gap correctly
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2017-05-30
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-30
gmungoc
JAL-2547 tooltip/AmendFeatures on gap straddled by...
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2017-05-30
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-29
Jim Procter
Merge branch 'bug/JAL-2034contextchange' into develop
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2017-05-29
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-27
Jim Procter
Merge branch 'bug/JAL-2491' into develop
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2017-05-27
Jim Procter
Merge branch 'bug/JAL-2547tooltipOnGap' into develop
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2017-05-27
Jim Procter
JAL-2526 test and documentation for SeqPanel.setStatus...
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2017-05-25
kiramt
JAl-2034 Ported to applet
bug/JAL-2034contextchange
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2017-05-23
gmungoc
JAL-2547 don't show features in tooltip over a gap
bug/JAL-2547tooltipOnGap
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2017-05-22
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-17
gmungoc
JAL-2504 use (and update) defaults for new feature...
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2017-05-16
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-16
kiramt
JAL-2522 Missed fix to applet
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2017-05-15
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
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2017-05-15
kiramt
Merge remote-tracking branch 'origin/develop' into...
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2017-05-12
gmungoc
JAL-2490 performant findFeaturesAtRes
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2017-05-12
Jim Procter
Merge branch 'features/JAL-2435splitScreenFont' into...
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2017-05-12
kiramt
JAL-2491 Renamed comp scrolling flag for consistency...
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2017-05-11
kiramt
JAL-2491 First port to applet
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diff to current
2017-05-05
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
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2017-05-05
kiramt
Merge remote-tracking branch
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2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
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2017-05-04
gmungoc
JAL-2504 allow feature type to be specified for Create...
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2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
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2017-04-26
kiramt
JAL-2388 last separation of hidden columns/col selection
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2017-04-25
kiramt
JAL-2388 Working hidden regions hide/show in desktop
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2017-04-24
kiramt
JAL-2388 Finished split of hidden columns and selected...
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diff to current
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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diff to current
2017-03-30
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
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commitdiff
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diff to current
2017-03-16
kiramt
JAL-2388 Applied ViewportRanges to code
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diff to current
2017-03-08
gmungoc
JAL-2435 copy font changes across split screen
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diff to current
2017-02-27
kiramt
JAL-2388 Make startRes,startSeq,endRes,endSeq private...
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diff to current
2017-02-15
Jim Procter
fix for JAL-2419 - don’t trash the current selection
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commitdiff
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2017-02-15
Jim Procter
JAL-2374 don’t search twice for containing group to...
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commitdiff
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2017-01-31
gmungoc
JAL-2371 rename global/viewportColourScheme to residueS...
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diff to current
2017-01-31
gmungoc
JAL-2385 more tests/bug fixes mostly for gui.SliderPane...
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2017-01-20
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
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2017-01-20
gmungoc
JAL-2385 tweak to applet 'switch colour slider context'
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2017-01-06
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
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commitdiff
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2017-01-05
gmungoc
JAL-2374 fix popup out by one and multiple groups bugs
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2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
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2016-10-28
Jim Procter
JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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commitdiff
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diff to current
2016-10-05
Jim Procter
JAL-2189 source formatting
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commitdiff
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2016-08-31
Jim Procter
JAL-2034 moved ‘isDefinedGroup’ flag to a test method...
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2016-07-19
Jim Procter
Merge branch 'develop' into efficiency/JAL-2034_JAL...
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2016-05-31
gmungoc
JAL-1011 JAL-1989 don't mirror column-only selections...
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2016-05-30
Jim Procter
Merge branch 'develop' into efficiency/JAL-2034_JAL...
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2016-05-27
gmungoc
JAL-1989 tightened up use of flag for 'column selection...
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commitdiff
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2016-03-25
Jim Procter
JAL-2034 disable overview updates when extent of a...
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commitdiff
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diff to current
2016-03-25
Jim Procter
JAL-2034 flag for triggering redraw of overview window...
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2016-01-11
gmungoc
JAL-1989 more unit tests and encapsulation for ColumnSe...
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-22
Jim Procter
Merge branch 'develop' into Release_2_9_0b1_Branch
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commitdiff
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2015-09-14
gmungoc
JAL-1880 handle sequence offsets properly when mapping...
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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commitdiff
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diff to current
2015-09-07
gmungoc
JAL-1636 translate stop codon as '*', mouseover * as...
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diff to current
2015-08-26
gmungoc
JAL-1840 correct setting status bar for structure mouseover
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