JAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and group colourscheme logic and...
[jalview.git] / src / jalview / appletgui /
2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and...
2014-05-01 Jim Procterfix for JAL-1495 - initialise menu entry from current...
2014-05-01 Jim Procterfix for JAL-1494 tweaked logic to fix NPEs and modify...
2014-05-01 Jim ProcterJAL-969 remove unnecessary overrides
2014-04-28 Jim ProcterJAL-1340 mark redundant sequences as soon as redundancy...
2014-04-28 Jim ProcterJAL-1340 simpler and more efficient interactive highlig...
2014-04-28 Jim ProcterJAL-1340 ensure slider value wide enough to see three...
2014-04-24 Jim ProcterJAL-1232 fix - ensure display all columns flag is set...
2014-04-05 Jim ProcterMerge branch 'r281_JAL-1211' into Release_2_8_1_Branch
2014-04-04 Jim ProcterJAL-1211 - set annotation panel height according to...
2014-04-04 Jim ProcterJAL-1211 - pick up site-defined defined window geometry...
2014-04-04 Jim ProcterJAL-1335 typo and 'edit' action
2014-02-17 Jim ProcterJAL-535 interface for GUI state update methods that...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 natasha's name on applet author list
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2014-01-13 Jim ProcterMerge branch 'JAL-1422_srs' into JAL-1422_srs_r281
2014-01-13 Jim ProcterMerge branch 'JAL-1422_srs' into Release_2_8_Branch
2014-01-13 Jim ProcterJAL-1422 update any existing configuration to replace...
2014-01-13 Jim ProcterJAL-1422 change default link to EMBL-EBI Search
2013-12-25 darolmarJAL-1355 (basic i18n support)
2013-10-17 Jim Procterfix for JAL-1398 - original colourscheme is enabled...
2013-10-17 Jim ProcterJAL-1233 TODO concerning the way we propagate annotatio...
2013-10-17 Jim ProcterJAL-1397 getters for originalColours flag
2013-10-08 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_...
2013-10-08 Jim ProcterJAL-1384 Create Group in selection popup menu
2013-10-08 Jim Procterfix for JAL-1387
2013-10-08 Jim ProcterJAL-1384 documentation and consistent ordering for...
2013-10-08 Jim ProcterJAL-1384 group/ungroup sequences with command/ctrl...
2013-10-07 Jim ProcterJAL-1385 refactor logic to AlignmentViewController
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings...
2013-08-29 darolmari18n
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs...
2013-06-23 Jim ProcterJAL-1230 update alignment state for annotation edits...
2013-06-07 Jim Procterfix for JAL-1246
2013-06-07 Jim ProcterJAL-1307 patch to squash number format exceptions when...
2013-05-24 Jim ProcterJAL-1161 conditional parameters for controlling clipping
2013-05-24 Jim ProcterJAL-1161 changed signature to allow clipping bounds...
2013-01-18 jprocterJAL-1255 don't show 'Right click to add annotations...
2012-11-08 jproctertidy imports
2012-11-07 jprocterJAL-957 manual update to applet authorlist - need to...
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-25 jprocterJAL-1031 allow empty selections to pass through to...
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty...
2012-09-24 jprocterJAL-958 revised applet parameter documentation to stand...
2012-09-24 jprocterJAL-958 normalise logo menu options in applet
2012-09-24 jprocterJAL-516 JAL-759 JAL-1066 group & group colourscheme...
2012-09-24 jprocteronly recalc group conservation after last sequence...
2012-09-24 jprocterJAL-516 JAL-759 JAL-1066 group & group colourscheme...
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated...
2012-09-19 jprocterJAL-1170 column and row positions confused in implement...
2012-09-02 jprocterJAL-812 only trigger alignment redraw and calculation...
2012-09-02 jprocterJAL-1007 refactored code and patched calculation bug
2012-08-31 jprocterJAL-1015 equivalent menu items for applet - not visible...
2012-08-29 jprocterJAL-1155 fix panel length calculation for grouped graph...
2012-07-01 jprocterensure all annotation dependent rendering gets refreshed
2012-06-15 jprocterfix JAL-1122
2012-06-15 jprocterJAL-535 - refactored core PCA viewer code to viewmodel
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel.
2012-06-15 jprocterMerge branch 'JAL-1013_pca_rna_dna' into develop
2012-06-13 jprocterjavatidy
2012-06-12 jprocterJAL-1115 refactor reordering code operating directly...
2012-06-12 jprocterJAL-1115 refactor base collection for Alignment from...
2012-06-07 jprocterjavatidy
2012-06-07 jprocterJAL-967, JAL-1114, JAL-1115 - modified render and calcu...
2012-05-31 jprocterformatting
2012-05-30 jprocterJAL-969 - refactor colourscheme machinery from GUI...
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta...
2012-05-24 jprocterpatch for occasional NPE when applet is quit
2012-05-23 jprocterJAL-1078 - extend applet cut'n'paste features/annotatio...
2012-05-23 jprocterJAL-1067, JAL-1105 - refactor parser to fit Jalview...
2012-05-23 jprocterJAL-1102 todos and status updates when data is added
2012-05-23 jproctertodo JAL-1104 : functions to refactor
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065...
2012-05-16 jprocterwarning dialog - fixes JAL-1099
2011-12-08 jprocter(JAL-1013) specify sequence type to ensure PCA calculat...
2011-12-08 jprocterreorder fields to match application
2011-11-04 jprocterMerge branch 'JAL-980_jmol_patch' into develop
2011-11-04 jprocter(JAL-980,JAL-982) - applet console only allows console...
2011-11-04 jprocter(JAL-980) update binding for refactored Jmol constants...
2011-10-28 jprocter(JAL-885) RNA helix and purine pyrimidine colouring...
2011-10-28 jprocterJAL-969 - refactor initialisation of automatic annotati...
2011-10-28 jprocterJAL-902 structure conservation row for applet
2011-10-28 jprocter(JAL-970) interactive editing of RNA helix annotation...
2011-10-28 jprocter(JAL-889) ensure annotation row is revalidated after...
2011-10-27 jprocter(JAL-969) efficiency
2011-10-27 jprocter(JAL-969) removed TODOs
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-27 jprocter(JAL-967) ensure annotation panel is rendered with...
2011-10-21 jprocterRefactored alignment viewport to use common base, exten...
2011-10-21 jprocterextend alignPanel api with OOMHandler call to raise...
2011-10-21 jprocterMerge branch 'Release_2_7_Branch_hotfix_JAL-962' into...
2011-10-21 jprocter(JAL-965) new api methods to allow features to be loade...
2011-10-21 jprocter(JAL-962) allow group visibility to be specified before...
2011-10-14 jprocter(JAL-958) - normalised sequence logo for applet
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_...
2011-09-27 jprocterbackout overzealous logic disabling feature links in...
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