2016-09-13 |
gmungoc | JAL-2196 refactor PDBEntry.getProperty,setProperty... |
tree | commitdiff |
2016-09-01 |
Jim Procter | Merge branch 'bug/JAL-2034_fix' into develop |
tree | commitdiff |
2016-09-01 |
gmungoc | JAL-1421 add generics to NJTree, refactor recursive... |
tree | commitdiff |
2016-08-31 |
Jim Procter | JAL-2034 moved ‘isDefinedGroup’ flag to a test method... |
tree | commitdiff |
2016-08-26 |
gmungoc | Merge branch 'develop' into bug/JAL-1841rnaSecStr |
tree | commitdiff |
2016-08-24 |
gmungoc | JAL-1355 correct 'thereshold' to 'threshold' in message... |
tree | commitdiff |
2016-08-24 |
gmungoc | JAL-1424 removed unused and duplicated message keys |
tree | commitdiff |
2016-08-24 |
gmungoc | JAL-2151 port fix to applet |
tree | commitdiff |
2016-08-18 |
gmungoc | Merge branch 'develop' into bug/JAL-1841rnaSecStr |
tree | commitdiff |
2016-08-17 |
gmungoc | JAL-2146 status message now with formatted residue... |
tree | commitdiff |
2016-08-17 |
gmungoc | JAL-2173 don't remove annotation from hidden columns |
tree | commitdiff |
2016-08-16 |
gmungoc | JAL-2171 matching bracket default character for rna... |
tree | commitdiff |
2016-08-12 |
gmungoc | JAL-2171 default SS symbol to existing (if present) |
tree | commitdiff |
2016-08-10 |
gmungoc | JAL-2124 i18n of 'All' menu item |
tree | commitdiff |
2016-08-10 |
gmungoc | JAL-2146 show Column no [Sequence no [Residue / pos... |
tree | commitdiff |
2016-07-19 |
Jim Procter | Merge branch 'develop' into efficiency/JAL-2034_JAL... |
tree | commitdiff |
2016-07-18 |
Jim Procter | Merge branch 'develop' of source.jalview.org/git/jalvie... |
tree | commitdiff |
2016-07-18 |
Jim Procter | JAL-666 patch JAL-1947 in applet where overview is... |
tree | commitdiff |
2016-07-18 |
gmungoc | JAL-2099 ensure initial setting of scaleAbove reaches... |
tree | commitdiff |
2016-07-18 |
gmungoc | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2016-07-18 |
gmungoc | JAL-2099 JAL-2100 port scale number / hidden column... |
tree | commitdiff |
2016-07-18 |
gmungoc | JAL-2015 restore check for null colour in paint() |
tree | commitdiff |
2016-07-18 |
Jim Procter | Merge branch 'features/JAL-2068groovyAnnotationWorker... |
tree | commitdiff |
2016-06-27 |
gmungoc | JAL-2133 refactored duplicated code to AlignmentViewport |
tree | commitdiff |
2016-06-21 |
Jim Procter | Merge branch 'features/JAL-1956_featureStyles' into... |
tree | commitdiff |
2016-06-20 |
Jim Procter | JAL-2065 port patch to applet |
tree | commitdiff |
2016-06-20 |
Jim Procter | Merge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker |
tree | commitdiff |
2016-05-31 |
Jim Procter | Merge branch 'jims/291patches' into develop |
tree | commitdiff |
2016-05-31 |
gmungoc | JAL-1011 JAL-1989 don't mirror column-only selections... |
tree | commitdiff |
2016-05-30 |
Jim Procter | JAL-1557 allow group associated rows to be used to... |
tree | commitdiff |
2016-05-30 |
Jim Procter | JAL-2077 fix: convenience method and checks for CMD... |
tree | commitdiff |
2016-05-30 |
Jim Procter | JAL-1551 formatting |
tree | commitdiff |
2016-05-30 |
Jim Procter | Merge branch 'develop' into efficiency/JAL-2034_JAL... |
tree | commitdiff |
2016-05-27 |
gmungoc | JAL-1989 tightened up use of flag for 'column selection... |
tree | commitdiff |
2016-05-10 |
gmungoc | Merge branch 'develop' into features/JAL-1956_featureStyles |
tree | commitdiff |
2016-05-09 |
gmungoc | JAL-2018 export graduated feature colours correctly |
tree | commitdiff |
2016-05-04 |
gmungoc | JAL-2092 hide columns with/without feature |
tree | commitdiff |
2016-05-04 |
gmungoc | JAL-2090 removed test for Java > 1.1 to enable transparency |
tree | commitdiff |
2016-05-03 |
gmungoc | JAL-2068 minimised jalview.gui imports, test for remove... |
tree | commitdiff |
2016-04-27 |
Jim Procter | JAL-1366 JAL-2086 reinstate bolding of reference sequence |
tree | commitdiff |
2016-04-14 |
gmungoc | JAL-1421 typed map / lists, explicit imports, method... |
tree | commitdiff |
2016-04-11 |
Jim Procter | Merge branch 'develop' into efficiency/JAL-2034_JAL... |
tree | commitdiff |
2016-04-08 |
Jim Procter | JAL-2053 fix erratic hidden column marker display |
tree | commitdiff |
2016-04-07 |
Jim Procter | JAL-1722 fix: don’t draw visible regions outside viewpo... |
tree | commitdiff |
2016-04-04 |
Jim Procter | JAL-2001 TODO for new ColumnSelection API |
tree | commitdiff |
2016-04-04 |
Jim Procter | JAL-969 refactor columnselection operation (during... |
tree | commitdiff |
2016-03-25 |
Jim Procter | JAL-2034 break out of redraw loop early if another... |
tree | commitdiff |
2016-03-25 |
Jim Procter | JAL-2034 disable overview updates when extent of a... |
tree | commitdiff |
2016-03-25 |
Jim Procter | JAL-2034 make Escape/select/deselect operations not... |
tree | commitdiff |
2016-03-25 |
Jim Procter | JAL-2034 flag for triggering redraw of overview window... |
tree | commitdiff |
2016-03-23 |
tcofoegbu | JAL-2009 added programmatic custom feature setting... |
tree | commitdiff |
2016-03-22 |
tcofoegbu | JAL-1919 code improvement to make PDB sequence fetcher... |
tree | commitdiff |
2016-02-24 |
gmungoc | JAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles |
tree | commitdiff |
2016-02-12 |
gmungoc | JAL-2008 avoid unnecessary repaints; signatures changed... |
tree | commitdiff |
2016-01-28 |
gmungoc | Merge branch 'develop' into JAL-1705_trialMerge |
tree | commitdiff |
2016-01-11 |
gmungoc | JAL-1989 additional ways to 'mirror' show/hide columns... |
tree | commitdiff |
2016-01-11 |
gmungoc | JAL-1989 more unit tests and encapsulation for ColumnSe... |
tree | commitdiff |
2015-12-22 |
gmungoc | JAL-653 set showSequenceFeatures=true on loading a... |
tree | commitdiff |
2015-12-09 |
Jim Procter | JAL-1982 hotfix to prevent NPE with applet launch on... |
tree | commitdiff |
2015-11-21 |
gmungoc | JAL-1968 remove feature links |
tree | commitdiff |
2015-11-21 |
gmungoc | JAL-653 JAL-1968 FeaturesFile now handles Jalview or... |
tree | commitdiff |
2015-11-11 |
tcofoegbu | merge |
tree | commitdiff |
2015-10-22 |
gmungoc | JAL-1932 TrimRegionCommand bug fix, tests and purge... |
tree | commitdiff |
2015-10-15 |
tcofoegbu | JAL-1479 refactored SequenceI interface - changed getDB... |
tree | commitdiff |
2015-10-07 |
Jim Procter | JAL-1894 source formatting |
tree | commitdiff |
2015-10-05 |
gmungoc | JAL-1684 JAL-1452 new applet parameters defaultColourNuc |
tree | commitdiff |
2015-09-29 |
tcofoegbu | JAL-1896 fixed NPE for RNA Helice without equivalent... |
tree | commitdiff |
2015-09-28 |
tcofoegbu | merge |
tree | commitdiff |
2015-09-28 |
tcofoegbu | JAL-1896 revised implementation to construct a ColourSc... |
tree | commitdiff |
2015-09-28 |
gmungoc | JAL-1909 repaint complementary alignment panel after... |
tree | commitdiff |
2015-09-22 |
tcofoegbu | JAL-1774 house keeping |
tree | commitdiff |
2015-09-21 |
tcofoegbu | merge |
tree | commitdiff |
2015-09-21 |
tcofoegbu | JAL-1774 modifed warning dialog to use JVDialog rather... |
tree | commitdiff |
2015-09-21 |
gmungoc | JAL-1152 set initial state of show alignment/sequence... |
tree | commitdiff |
2015-09-18 |
tcofoegbu | JAL-1774 JAL-1506 revised implementaion for clear highl... |
tree | commitdiff |
2015-09-14 |
gmungoc | JAL-1865 fixed so initial state of annotation sort... |
tree | commitdiff |
2015-09-14 |
gmungoc | JAL-1880 handle sequence offsets properly when mapping... |
tree | commitdiff |
2015-09-14 |
gmungoc | JAL-1684 align added alignment to match original in... |
tree | commitdiff |
2015-09-14 |
gmungoc | JAL-1684 ensure cDNA placed above protein in SplitFrame |
tree | commitdiff |
2015-09-10 |
Jim Procter | JAL-1645 licencing for new files in src |
tree | commitdiff |
2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
tree | commitdiff |
2015-09-10 |
Jim Procter | JAL-1370 detect any type of gap character in reference... |
tree | commitdiff |
2015-09-09 |
gmungoc | JAL-1619 update applet.currentAlignFrame on any menu... |
tree | commitdiff |
2015-09-07 |
gmungoc | JAL-1636 translate stop codon as '*', mouseover * as... |
tree | commitdiff |
2015-09-06 |
Jim Procter | JAL-1645 JAL-1355 UI/i18n: added missing messages,... |
tree | commitdiff |
2015-09-05 |
Jim Procter | JAL-1871 JAL-1553 don’t modify selection/view colour... |
tree | commitdiff |
2015-09-03 |
Jim Procter | JAL-961 efficiency TODO: decouple overview updates... |
tree | commitdiff |
2015-09-03 |
Jim Procter | JAL-1680 JAL-1576 JAL-1233 all conservation and consens... |
tree | commitdiff |
2015-08-26 |
gmungoc | JAL-1830 dropped reference counts for mappings, instead... |
tree | commitdiff |
2015-08-26 |
gmungoc | JAL-1840 correct setting status bar for structure mouseover |
tree | commitdiff |
2015-08-26 |
gmungoc | JAL-1759 added check for null (console 'history') |
tree | commitdiff |
2015-08-26 |
gmungoc | Fix to use correct resource bundle entry |
tree | commitdiff |
2015-08-25 |
gmungoc | JAL-1674 more correct status bars in splitframe mouseov... |
tree | commitdiff |
2015-08-24 |
gmungoc | remove mentions of non-functional RNAInteraction colour... |
tree | commitdiff |
2015-08-07 |
tcofoegbu | JAL-1824 updated caching procedure for pdb entries... |
tree | commitdiff |
2015-07-23 |
Jim Procter | Merge branch 'features/JAL-1759jmolUpdate' into develop |
tree | commitdiff |
2015-07-23 |
Jim Procter | JAL-1551 JAL-1819 formatting/imports |
tree | commitdiff |
2015-07-23 |
Jim Procter | JAL-1819 use Float.isNaN() to check for NaNs! |
tree | commitdiff |
2015-07-08 |
gmungoc | JAL-1759 merge from develop |
tree | commitdiff |
2015-07-06 |
gmungoc | JAL-1799 tweaked calculation for applet, now showing... |
tree | commitdiff |
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