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JAL-2418 patch build - broken htsjdk import
[jalview.git] / src / jalview / appletgui /
2017-05-17 gmungocJAL-2504 use (and update) defaults for new feature... tree | commitdiff
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures tree | commitdiff
2017-05-16 kiramtJAL-2522 Missed fix to applet tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into... tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into... tree | commitdiff
2017-05-12 Jim ProcterJAL-2388 checkbox in overview popup for applet tree | commitdiff
2017-05-08 gmungocMerge remote-tracking branch 'origin/bug/JAL-2515'... tree | commitdiff
2017-05-08 kiramtJAL-2515 Id panel in applet updated for NPE on urlProvider bug/JAL-2515 tree | commitdiff
2017-05-08 kiramtJAL-2512 And applet tree | commitdiff
2017-05-05 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-05-05 gmungocJAL-964 JAL-2510 update Feature Settings from Amend... tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-05-04 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-04 gmungocJAL-2504 allow feature type to be specified for Create... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into... tree | commitdiff
2017-05-03 Jim ProcterJAL-2503 show threshold slider for quantitative annotat... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 honour percentage checkbox when entering value... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 applet: only enable percent checkbox when... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 percentage checkbox follows threshold value... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 recover state for ‘display percentage’ checkbox tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 simplify code tree | commitdiff
2017-05-02 gmungocJAL-2499 inlined two 1-line methods tree | commitdiff
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside... tree | commitdiff
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA... tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 JAL-2432 code tidy tree | commitdiff
2017-04-27 Jim ProcterJAL-2432 left justify value shown after adjusting thres... tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 JAL-2432 percentile filter for select/hide... tree | commitdiff
2017-04-26 kiramtMerge remote-tracking branch 'origin/features/JAL-2388h... tree | commitdiff
2017-04-26 kiramtJAL-2388 last separation of hidden columns/col selection tree | commitdiff
2017-04-26 kiramtJAL-2388 Tidies and unit tests tree | commitdiff
2017-04-25 kiramtJAL-2388 Missed file from previous commit tree | commitdiff
2017-04-25 kiramtJAL-2388 Reverted and re-did applet changes tree | commitdiff
2017-04-25 kiramtJAL-2388 Tidies and other corrections so applet compiles tree | commitdiff
2017-04-25 kiramtJAL-2388 And corrected OverviewCanvas for applet tree | commitdiff
2017-04-25 kiramtJAL-2388 Updated applet to show/hide hidden regions... tree | commitdiff
2017-04-25 kiramtJAL-2388 Working hidden regions hide/show in desktop tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-24 kiramtJAL-2388 Finished split of hidden columns and selected... tree | commitdiff
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped... tree | commitdiff
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row... tree | commitdiff
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... tree | commitdiff
2017-04-19 gmungocJAL-2435 mirror font changes with middle mouse drag tree | commitdiff
2017-04-19 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-04-19 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-05 gmungocJAL-2384 JAL-2371 update ResidueShader on change of... tree | commitdiff
2017-04-03 gmungocJAL-2435 further adjustments to behaviour in split... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice tree | commitdiff
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups tree | commitdiff
2017-03-29 kiramtJAL-2388 New rendering code, extensions to support... tree | commitdiff
2017-03-27 gmungocJAL-2468 change score model in PCAModel when switching tree | commitdiff
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin... tree | commitdiff
2017-03-24 gmungocJAL-2428 use 'correct' name for selected score model tree | commitdiff
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text... tree | commitdiff
2017-03-24 kiramtJAL-2388 Removing AlignmentPanel dependency (mostly) tree | commitdiff
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca... tree | commitdiff
2017-03-23 gmungocJAL-2397 formatting only tree | commitdiff
2017-03-23 kiramtJAL-2388 Factored out applet overview canvas, threading... tree | commitdiff
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-03-22 kiramtJAL-2388 Reinstated original overview checks for annota... tree | commitdiff
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-03-21 kiramtJAL-2388 Made ViewportRanges final tree | commitdiff
2017-03-21 gmungocJAL-2438 removed (non-functional) lastSeq, lastSequence... tree | commitdiff
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code tree | commitdiff
2017-03-16 kiramtJAL-2388 Renamed viewport position props to viewport... tree | commitdiff
2017-03-16 kiramtJAL-2388 Applet update for overview panel tree | commitdiff
2017-03-15 kiramtJAL-2388 Unit tests and tidies tree | commitdiff
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour tree | commitdiff
2017-03-15 gmungocJAL-2438 corrected getFeatureRenderer() tree | commitdiff
2017-03-15 gmungocJAL-2442 applet feature transparency also on overview... tree | commitdiff
2017-03-14 kiramtJAL-2439 Fixes to out-by-one sequence indexing in gui... tree | commitdiff
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen... tree | commitdiff
2017-03-09 kiramtJAL-2388 Minor fix for annotation graph, removed unit... tree | commitdiff
2017-03-08 gmungocJAL-2435 copy font changes across split screen tree | commitdiff
2017-03-06 kiramtJAL-2388 Remove OverviewDimensions dependency on gui... tree | commitdiff
2017-03-06 kiramtJAL-2388 Corrected overview panel behaviour, updated... tree | commitdiff
2017-03-06 gmungocJAL-2428 separate TreeModel from TreeBuilder/NJTree... tree | commitdiff
2017-03-03 kiramtJAL-2388 Initial removal of hidden cols/seqs out of... tree | commitdiff
2017-02-27 kiramtJAL-2388 Make startRes,startSeq,endRes,endSeq private... tree | commitdiff
2017-02-27 gmungocJAL-1632 dialog to calculate either Tree or PCA tree | commitdiff
2017-02-27 kiramtJAL-2388 Minor refactoring tree | commitdiff
2017-02-27 gmungocJAL-1632 add score model params to PCAModel and PCA... tree | commitdiff
2017-02-27 gmungocJAL-1632 refactored NJTree constructor to include Simil... tree | commitdiff
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy... tree | commitdiff
2017-02-21 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-02-21 kiramtMerge branch 'develop' into features/JAL-2388OverviewWindow tree | commitdiff
2017-02-20 gmungocJAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... tree | commitdiff
2017-02-17 gmungocJAL-2416 scoreMatrices removed from ResidueProperties tree | commitdiff
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