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JAL-2788 possible adjustments to sequence accesses
[jalview.git] / src / jalview / datamodel / Mapping.java
2017-09-01 gmungocJAL-2488 remove finalize methods blob | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList blob | commitdiff | diff to current
2017-08-16 Jim ProcterJAL-2418 source formatting blob | commitdiff | diff to current
2017-06-14 gmungocJAL-2598 Sequence.getSequence return a copy of the... blob | commitdiff | diff to current
2017-05-25 gmungocJAL-2050 make SequenceFeature.score final, adjust const... blob | commitdiff | diff to current
2017-05-16 gmungocJAL-2505 unreachable code (for many years) removed blob | commitdiff | diff to current
2017-05-09 gmungocJAL-2505 use constructors to set (what will be) final... blob | commitdiff | diff to current
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch blob | commitdiff | diff to current
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... blob | commitdiff | diff to current
2016-07-06 gmungocJAL-2110 generic rather than specific check for gap... blob | commitdiff | diff to current
2016-07-06 gmungocJAL-2110 add 'mapFromId' to Mapping (for e.g. EMBL... blob | commitdiff | diff to current
2016-06-14 gmungocJAL-1686 JAL-2110 equals and/or hashCode method added blob | commitdiff | diff to current
2016-03-02 gmungocJAL-1705 include any unmapped protein start 'X' when... blob | commitdiff | diff to current
2016-01-21 gmungocJAL-1705 toString() added (for debugging) blob | commitdiff | diff to current
2015-12-22 gmungocJAL-653 GFF new/refactored helper classes blob | commitdiff | diff to current
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 blob | commitdiff | diff to current
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright blob | commitdiff | diff to current
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch blob | commitdiff | diff to current
2015-10-07 Jim ProcterJAL-1894 source formatting blob | commitdiff | diff to current
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch blob | commitdiff | diff to current
2015-09-14 gmungocJAL-1880 handle sequence offsets properly when mapping... blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports blob | commitdiff | diff to current
2015-05-15 gmungocJAL-1270 main method converted 'as seen' to JUnit blob | commitdiff | diff to current
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch blob | commitdiff | diff to current
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... blob | commitdiff | diff to current
2014-12-15 Jim ProcterJAL-1620 version bump and release notes blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 blob | commitdiff | diff to current
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 blob | commitdiff | diff to current
2014-05-22 Jim ProcterJAL-1503 update version in GPL header blob | commitdiff | diff to current
2014-01-29 Jim ProcterJAL-1432 updated copyright notices blob | commitdiff | diff to current
2012-10-22 jprocterJalview 2.8 Source Header blob | commitdiff | diff to current
2011-10-10 jprocterupdate author list in license for (JAL-826) blob | commitdiff | diff to current
2011-09-27 jprocterapply version 2.7 copyright blob | commitdiff | diff to current
2010-09-23 jprocterJalview 2.6 source licence blob | commitdiff | diff to current
2010-04-30 jprocterjalview 2.5 release banner blob | commitdiff | diff to current
2009-06-08 jprocterapply gpl development license blob | commitdiff | diff to current
2008-09-04 jproctermerge from 2_4_Release branch blob | commitdiff | diff to current
2008-02-22 jprocterindex number for contiguous part of mapped sequence... blob | commitdiff | diff to current
2007-12-21 jprocterbugfix blob | commitdiff | diff to current
2007-07-13 jprocterdebugged mappings and translated sequence recovery blob | commitdiff | diff to current
2007-05-02 jprocterdocumentation and proxy call to util.MapList.getToWord... blob | commitdiff | diff to current
2007-04-25 jproctermoving word methods to MapList and begin bug-fix for... blob | commitdiff | diff to current
2007-04-24 jprocterbugfix for sequence features mapped to multiple contigs... blob | commitdiff | diff to current
2007-04-17 jproctercopy constructor and ascii type change. blob | commitdiff | diff to current
2007-03-19 jproctermapping implemented by MapList added to DBRefEntry. blob | commitdiff | diff to current