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Merge branch 'patch/JAL-4298_synchronize_consoledoc' into bug/JAL-4298_java_console_c...
[jalview.git] / src / jalview / ext / ensembl / EnsemblCdna.java
2018-10-25 gmungocJAL-3143 fetch Ensembl(Genomes) features as JSON not GFF blob | commitdiff
2018-08-10 gmungocJAL-3076 refactor for more efficient scan of 'gene... blob | commitdiff | diff to current
2018-01-30 gmungocJAL-1793 update spike build to latest incl stop and... blob | commitdiff | diff to current
2018-01-16 gmungocJAL-2679 use object_type=Transcript for lookup of Paren... blob | commitdiff | diff to current
2017-06-09 gmungocJAL-2446 merged to spike branch blob | commitdiff | diff to current
2017-05-24 gmungocJAL-2529 add object_type=cdna to EnsemblCdna parameters blob | commitdiff | diff to current
2016-10-05 Jim ProcterJAL-2189 apply license blob | commitdiff | diff to current
2016-10-05 Jim ProcterJAL-2189 source formatting blob | commitdiff | diff to current
2016-04-01 gmungocJAL-1705 fetch all Ensembl xrefs (except GO terms) blob | commitdiff | diff to current
2016-03-11 gmungocJAL-1705 refactoring etc for fetching Ensembl --> Uniprot blob | commitdiff | diff to current
2016-03-03 gmungocJAL-1705 include stop codons in derived CDS; support... blob | commitdiff | diff to current
2016-02-19 gmungocJAL-1705 regular expression updates, tests, other refac... blob | commitdiff | diff to current
2016-02-12 gmungocJAL-1705 various refactoring towards Uniprot-to-Ensembl... blob | commitdiff | diff to current
2016-02-04 gmungocJAL-1705 additional tests, validation regexp tweaks... blob | commitdiff | diff to current
2016-02-01 gmungocJAL-1705 JAL-1191 SequenceOntologyLite added as hard... blob | commitdiff | diff to current
2016-01-30 gmungocJAL-1705 refactored cross-reference fetching (CCDS... blob | commitdiff | diff to current
2016-01-27 gmungocJAL-1705 add exon name to features and render on peptid... blob | commitdiff | diff to current
2016-01-26 gmungocJAL-1705 derive transcript sequences from gene sequence... blob | commitdiff | diff to current
2016-01-25 gmungocJAL-1705 EnsemblGene added, and related refactoring blob | commitdiff | diff to current
2016-01-23 gmungocJAL-1705 compute peptide variants from dna; add "conseq... blob | commitdiff | diff to current
2016-01-21 gmungocJAL-1705 reworked Ensembl clients now fetching and... blob | commitdiff | diff to current
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods... blob | commitdiff | diff to current
2015-06-28 Jim ProcterJAl-1705 ENSEMBL cDNA type cannot be queried with pepti... blob | commitdiff | diff to current
2015-06-28 Jim ProcterJAL-1705 concrete classes for different ENSEMBL sequenc... blob | commitdiff | diff to current