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JAL-1705 code tidy/comment only
[jalview.git] / src / jalview / ext / ensembl / EnsemblSeqProxy.java
2016-03-15 gmungocJAL-1705 compute reverse complement of variants on... blob | commitdiff
2016-03-11 gmungocJAL-1705 refactoring etc for fetching Ensembl --> Uniprot blob | commitdiff | diff to current
2016-03-04 gmungocJAL-1705 parse 'description' from GFF as sequence descr... blob | commitdiff | diff to current
2016-03-03 gmungocJAL-1705 include stop codons in derived CDS; support... blob | commitdiff | diff to current
2016-03-01 gmungocJAL-1705 align CDS and peptide products to transcripts blob | commitdiff | diff to current
2016-02-19 gmungocJAL-1705 regular expression updates, tests, other refac... blob | commitdiff | diff to current
2016-02-12 gmungocJAL-1705 various refactoring towards Uniprot-to-Ensembl... blob | commitdiff | diff to current
2016-02-04 gmungocJAL-1705 additional tests, validation regexp tweaks... blob | commitdiff | diff to current
2016-02-01 gmungocJAL-1705 further unit tests blob | commitdiff | diff to current
2016-02-01 gmungocJAL-1705 set Uniprot xref as 'source dbref' (for SIFTS... blob | commitdiff | diff to current
2016-02-01 gmungocJAL-1705 JAL-1191 SequenceOntologyLite added as hard... blob | commitdiff | diff to current
2016-01-30 gmungocJAL-1705 refactored cross-reference fetching (CCDS... blob | commitdiff | diff to current
2016-01-29 gmungocJAL-1705 fetch Uniprot and PDB xrefs for Ensembl protei... blob | commitdiff | diff to current
2016-01-28 gmungocJAL-1705 refine feature copying to including 5' and... blob | commitdiff | diff to current
2016-01-28 gmungocJAL-1705 tests added, minor bugfix and refactoring blob | commitdiff | diff to current
2016-01-27 gmungocJAL-1705 add exon name to features and render on peptid... blob | commitdiff | diff to current
2016-01-27 gmungocJAL-1705 use GET for single queries; set gene name... blob | commitdiff | diff to current
2016-01-26 gmungocJAL-1705 derive transcript sequences from gene sequence... blob | commitdiff | diff to current
2016-01-25 gmungocJAL-1705 EnsemblGene added, and related refactoring blob | commitdiff | diff to current
2016-01-23 gmungocJAL-1705 compute peptide variants from dna; add "conseq... blob | commitdiff | diff to current
2016-01-21 gmungocJAL-1705 reworked Ensembl clients now fetching and... blob | commitdiff | diff to current
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods... blob | commitdiff | diff to current
2015-06-28 Jim ProcterJAL-1705 renamed SeqFetcherTest to EnsemblSeqProxyTest blob | commitdiff | diff to current