JAL-3253 preliminary static fixes for JavaScript
[jalview.git] / src / jalview / gui / AlignmentPanel.java
2017-03-31 gmungocMerge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code
2017-03-15 gmungocJAL-2431 show cDNA consensus after New View in split...
2017-03-14 kiramtJAL-2439 Fixes to out-by-one sequence indexing in gui...
2017-02-27 kiramtJAL-2388 Make startRes,startSeq,endRes,endSeq private...
2017-02-23 kiramtJAL-2388 Unit tests in progress
2017-02-21 kiramtMerge branch 'bug/JAL-2421overviewboxflicker' into
2017-02-21 kiramtJAL-2421 Unit test
2017-02-17 kiramtJAL-2388 Incomplete unit tests
2017-02-17 kiramtJAL-2421 Fix to alignment panel scroll values, and...
2016-11-23 Jim ProcterMerge branch 'bug/JAL-2323disulfideOverview' into develop
2016-11-22 tcofoegbuMerge branch 'bug/JAL-2277_refactorPrintUnwrapped'...
2016-11-22 gmungocJAL-2337 fix: only adjust once for scroll offset bug/JAL-2277_refactorPrintUnwrapped
2016-11-22 Jim ProcterMerge branch 'features/JAL-1738_JAL-345_selectionfromhi...
2016-11-22 gmungocJAL-2277 refactored AlignmentPanel.printUnwrapped to...
2016-11-21 tcofoegbuJAL-2277 bug fix for mis-alligned graphics output for...
2016-11-17 gmungocJAL-2327 disulfide bond abstracted to SequenceFeature...
2016-11-11 tcofoegbuJAL-2277 Refactored out duplicated method - printUnwrap...
2016-11-04 gmungocJAL-966 JAL-1854 removed redundant methods / modifiers...
2016-10-28 Jim ProcterJAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-09-22 gmungocJAL-2216 explicitly null AnnotationPanel and Annotation...
2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
2016-02-09 tcofoegbuJAL-1975 updated image export pipeline to produce more...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-10-02 gmungocJAL-1815 restore split frame geometry including horizon...
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-21 gmungocJAL-1799 update height of annotation labels to match...
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-03 Jim ProcterJAL-961 efficiency TODO: decouple overview updates...
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from...
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for...
2015-07-01 gmungocJAL-1799 deduct more space for decorators on Windows
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even...
2015-06-29 gmungocJAL-1799 adjusted annotation height calculation
2015-05-01 gmungocJAL-1690 refining 'copy format from' as applied to...
2015-04-27 gmungocJAL-1691 more stable linked scrolling across split...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-04-07 gmungocJAL-1691 linked scrollling in split frame (Desktop)
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour...
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-12-05 Charles OfoegbuJAL-1605 merge commit
2014-12-05 Charles OfoegbuChange the Html export to utilize svg
2014-11-27 Jim ProcterJAL-966 promote getName to an api method
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc
2014-11-13 Jim ProcterMerge branch 'features/JAL-1469_svg-output-for-figure...
2014-11-13 Jim ProcterMerge branch 'features/JAL-1469_svg-output-for-figure...
2014-11-12 Charles OfoegbuAdded support for SVG Export
2014-10-31 gmungocJAL-1152 menu tweaks plus new option to put Autocalc...
2014-10-30 gmungocJAL-1152 with sticky annotation sort order that updates...
2014-09-23 darolmarJAL-1355
2014-08-08 j.procter@dundee... JAL-1482 feature renderer and manipulation code refacto...
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-04-21 Jim ProcterJAL-967 JAL-1482 new feature renderer api - needs more...
2014-04-04 Jim ProcterJAL-1211 - set annotation panel height according to...
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-06-13 Jim Procterfix for JAL-1315
2013-05-24 Jim ProcterJAL-1291 reinstate fastPaint flag manipulation to make...
2013-05-24 Jim ProcterJAL-1161 only trigger an annotation repaint in unwrappe...
2013-05-24 Jim ProcterJAL-1161 enable fastPaint for nudges from scroll bars...
2012-11-08 jproctertidy imports
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated...
2012-09-06 jprocterJAL-958 flag indicating if visualization settings for...
2012-07-02 jprocterJAL-1129 progress bar - this patch doesn't provide...
2012-07-02 jprocterJAL-968 incremental - PNG/EPS output has annotation...
2012-07-02 jproctertidy imports
2012-07-02 jprocterJAL-974 - refactor FeatureRenderer constructor to Align...
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta...
2011-11-09 jprocterMerge branch 'JAL-986_idwidthprefs' into JAL-976_jabaws...
2011-11-09 jprocterMerge branch 'JAL-986_idwidthprefs' into develop
2011-11-09 jprocter(JAL-986) rendering to imageMap counts as rendering...
2011-11-09 jprocterMerge branch 'JAL-986_idwidthprefs' into develop
2011-11-09 jprocter(JAL-985,JAL-986) allow different ID margin calculation...
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-21 jprocterextend alignPanel api with OOMHandler call to raise...
2011-10-21 jprocterremove unnecessary import
2011-10-14 jprocter(JAL-958) - normalised sequence logo for applet
2011-10-11 jprocternormalised logo rendering (JAL-958)
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-07-22 jprocterensure propagation of colour change on annotation updat...
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager...
2011-04-21 jprocterseparated alignment annotation height calculation from...
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