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Merge branch 'develop' into bug/JAL-4059_update_swingJS_for_JalviewJS_2_11_2_and_2_11_3
[jalview.git]
/
src
/
jalview
/
gui
/
2021-02-18
gmungoc
JAL-3822 pass panel height and width to wrapped geometr...
tree
|
commitdiff
2021-02-18
gmungoc
JAL-2422 remove temporary patch (requires ChimeraX...
tree
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commitdiff
2021-02-10
Ben Soares
JAL-3251 On linux set (sun.awt.X11.XToolkit.)awtAppClas...
tree
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commitdiff
2021-02-10
Ben Soares
JAL-3521 Change grouped Jalview windows on linux taskba...
tree
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commitdiff
2021-02-05
Jim Procter
JAL-3814 don’t automatically launch the news browser...
tree
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commitdiff
2021-02-05
Jim Procter
JAL-3813 NOIDENTIFIERSSERVICE preference disables jalvi...
tree
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commitdiff
2021-02-05
Jim Procter
JAL-3811 document SHOW_JWS2_SERVICES user preference...
tree
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commitdiff
2021-02-04
gmungoc
JAL-2422 a fix and a fudge for two failing ChimeraX...
tree
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commitdiff
2021-01-21
gmungoc
JAL-3038 corrected code that reads editable JComboBox...
tree
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commitdiff
2020-12-17
gmungoc
JAL-1713 close and replace auto-opened Overview with...
tree
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commitdiff
2020-12-13
gmungoc
JAL-1713 renamed method to OverviewPanel.get/setFrameBo...
tree
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commitdiff
2020-12-12
gmungoc
JAL-1713 JAL-3119 JAL-3785 refactored get/set Overview...
tree
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commitdiff
2020-12-11
gmungoc
JAL-3785 set full title on automatically opened Overvie...
tree
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commitdiff
2020-12-11
Ben Soares
JAL-3594 Defintely want SplashScreen to appear in the...
tree
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commitdiff
2020-12-11
Ben Soares
JAL-3594 Adjustments to allow JalviewJS to use ChannelP...
tree
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commitdiff
2020-12-11
gmungoc
JAL-1713 fix typo; overview in project with open overvi...
tree
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commitdiff
2020-12-10
gmungoc
JAL-3784 null the right overview reference when it...
tree
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commitdiff
2020-12-10
gmungoc
JAL-3119 include view name (if any) in Overview title
tree
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commitdiff
2020-12-10
gmungoc
JAL-1713 refactorings to allow save/restore Overview...
tree
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commitdiff
2020-12-09
Ben Soares
JAL-3594 Images for splash screen
tree
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commitdiff
2020-12-09
Ben Soares
JAL-3594 JAL-3728 Added taskbar icons to desktop and...
tree
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commitdiff
2020-12-08
Ben Soares
Merge branch 'merge/develop_and_rebase_squashed_merge_J...
tree
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commitdiff
2020-12-08
Ben Soares
JAL-3594 Change main window title
tree
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commitdiff
2020-12-04
Ben Soares
JAL-3594 Added rotating logo png
tree
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commitdiff
2020-12-04
Ben Soares
JAL-3594 New jalview.util.ChannelProperties to get...
tree
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commitdiff
2020-12-01
Ben Soares
JAL-3609 JAL-3775 Tests for jalview.bin.HiDPISetting
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3775 Eclipse re-formatting commit
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Apply (proxy) button enabled when needed
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Small changes to allow future fitting with...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3275 JAL-3633: JAL-3275 Turned Preferences into...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Set proxy preferences before web calls in...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Memory only proxy auth password storage. Open...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 Added Proxy Authentication credentials in...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 Remember system set proxy properties. Add...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 ensure check both or https:// for urls
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3628 Error when saving alert box has been moved...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3676 More explicit tooltip about resetting log...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 improvement for visual selection of console...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 code review -- added non-listed Level into...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 Added Log Level ComboBox and Copy to Clipboard...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 Even more Cache.log.debug statements
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 More Cache.log.debug statements
tree
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commitdiff
2020-10-29
Jim Procter
Merge branch 'patch/JAL-3700_JAL-3748_JAL-3763_for_2_11...
tree
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commitdiff
2020-10-28
gmungoc
JAL-3725 restrict mapped virtual feature location to...
tree
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commitdiff
2020-10-22
gmungoc
JAL-3763 Javadoc, check for null, additional tests
tree
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commitdiff
2020-10-22
gmungoc
JAL-3763 Javadoc, check for null, additional tests
task/JAL-3763_newDatasetForCds
tree
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commitdiff
2020-09-23
Ben Soares
JAL-3633 ensure check both or https:// for urls
tree
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commitdiff
2020-09-21
Jim Procter
Merge branch 'merge_review/JAL-3490_2_11_2_develop...
tree
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commitdiff
2020-09-17
Jim Procter
JAL-3741 http to https (and jar to jvp for exampleFile...
tree
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commitdiff
2020-09-03
gmungoc
JAL-3648 resize annotation panel after dragging to...
tree
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commitdiff
2020-09-03
gmungoc
JAL-3648 resize annotation panel after dragging to...
tree
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commitdiff
2020-08-31
Jim Procter
JAL-3732 - sequences can be moved up/down in cursor...
tree
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commitdiff
2020-08-31
Jim Procter
JAL-3732 - sequences can be moved up/down in cursor...
tree
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commitdiff
2020-08-27
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
merge/JAL_1842+JAL-3509+releases_Release_2_11_1_Branch
tree
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commitdiff
2020-08-17
Jim Procter
JAL-3490 merged with 2.11.2 develop
tree
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commitdiff
2020-08-17
Jim Procter
Merge branch 'patch/Release_2_11_1_Branch_patch_JAL...
tree
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commitdiff
2020-08-17
Jim Procter
Merge branch 'task/JAL-3597memoryLeakTest' into develop
tree
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commitdiff
2020-08-17
Jim Procter
Merge branch 'patch/JAL-3597_for_Release_2_11_1_Branch...
tree
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commitdiff
2020-08-14
Ben Soares
JAL-3676 More explicit tooltip about resetting log...
tree
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commitdiff
2020-08-13
gmungoc
JAL-3597 additional references nulled, bug in test...
tree
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commitdiff
2020-08-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
tree
|
commitdiff
2020-08-11
Jim Procter
JAL-3673 make sure font metrics are updated if dealing...
tree
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commitdiff
2020-08-11
Jim Procter
Merge branch 'bug/JAL-2983negativeSliderMin' into relea...
tree
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commitdiff
2020-08-11
gmungoc
JAL-3371 more fine-grained slider; set Param slider...
tree
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commitdiff
2020-08-10
gmungoc
JAL-3490 match count independent of contiguous matches...
patch/Release_2_11_1_Branch_patch_JAL-3490
tree
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commitdiff
2020-08-05
Jim Procter
Merge branch 'merge/JAL-3628+JAL-3608+JAL-3609+JAL...
tree
|
commitdiff
2020-08-03
Jim Procter
Merge branch 'bug/JAL-2983negativeSliderMin' into develop
tree
|
commitdiff
2020-07-31
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
tree
|
commitdiff
2020-07-29
Jim Procter
Merge branch 'bug/JAL-2983negativeSliderMin' into relea...
tree
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commitdiff
2020-07-29
Jim Procter
JAL-3371 JAL-2983 don't modify 'extent' of slider ...
tree
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commitdiff
2020-07-27
Jim Procter
Merge branch 'bug/JAL-2983negativeSliderMin' into relea...
tree
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commitdiff
2020-07-27
Jim Procter
JAL-3697 show total number of features not shown
tree
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commitdiff
2020-07-27
Jim Procter
JAL-3697 show total number of features not shown
tree
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commitdiff
2020-07-14
gmungoc
JAL-1421 last change tidied up properly
tree
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commitdiff
2020-07-14
gmungoc
JAL-1421 types added to nameHash and nodeHash maps
tree
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commitdiff
2020-07-14
gmungoc
JAL-3597 additional references nulled, bug in test...
tree
|
commitdiff
2020-07-08
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
tree
|
commitdiff
2020-07-07
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
tree
|
commitdiff
2020-07-06
Ben Soares
JAL-3676 improvement for visual selection of console...
tree
|
commitdiff
2020-07-06
gmungoc
JAL-3311 JAL-3141 JAL-3144 tidying obsolete message...
tree
|
commitdiff
2020-07-06
Ben Soares
JAL-3628 improvement for visual selection of console...
tree
|
commitdiff
2020-07-06
Ben Soares
JAL-3628 Even more Cache.log.debug statements
tree
|
commitdiff
2020-07-04
Jim Procter
JAL-3638 don’t move cursor to next gap after moving...
tree
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commitdiff
2020-07-04
Jim Procter
JAL-3680 check whether a sequence selection exists...
tree
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commitdiff
2020-07-04
Jim Procter
JAL-3638 shift+arrow keys in cursor mode jumps cursor...
tree
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commitdiff
2020-07-04
Ben Soares
JAL-3628 More Cache.log.debug statements
tree
|
commitdiff
2020-07-02
Ben Soares
JAL-3676 code review -- added non-listed Level into...
tree
|
commitdiff
2020-06-30
Ben Soares
JAL-3676 Added Log Level ComboBox and Copy to Clipboard...
tree
|
commitdiff
2020-06-29
Jim Procter
Merge branch 'develop' of source.jalview.org/git/jalvie...
tree
|
commitdiff
2020-06-29
Jim Procter
JAL-3493 clear search highlights when escape/deselect all
tree
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commitdiff
2020-06-29
Jim Procter
JAL-3493 clear search highlights when escape/deselect all
tree
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commitdiff
2020-06-29
gmungoc
JAL-3674 more finessed asynchronous structure commands
tree
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commitdiff
2020-06-29
Jim Procter
Merge branch 'bug/JAL-3490findSpanHiddenGaps' into...
tree
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commitdiff
2020-06-29
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
|
commitdiff
2020-06-29
gmungoc
JAL-3518 corrected pulled up focusView() command
tree
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commitdiff
2020-06-29
gmungoc
JAL-3518 corrected action on pulled up closeViewer()
tree
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commitdiff
2020-06-26
Jim Procter
JAL-3673 make sure font metrics are updated if dealing...
tree
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commitdiff
2020-06-25
gmungoc
JAL-3518 pull up [get|list]ResidueAttributes to Structu...
tree
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commitdiff
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