merge
[jalview.git] / src / jalview / gui /
2015-08-06 tcofoegbumerge
2015-08-06 tcofoegbuJAL-1824 corrected copy'n'paste error introduced from...
2015-08-05 Jim ProcterJAL-1821 formatting
2015-08-05 Jim ProcterJAL-1821 launch the structure view in a separate thread...
2015-08-05 Jim ProcterJAL-1822 create dataset sequences if they aren’t alread...
2015-08-05 Jim ProcterJAL-1821 JAL-1759 make sure we wait around until the...
2015-08-04 tcofoegbuJAL-1821 updated implementation of launchStructureViewe...
2015-08-04 tcofoegbuupdated the reference sequence column of cached structu...
2015-08-04 tcofoegbuJAL-1821 updated the reference sequence column of struc...
2015-07-30 tcofoegbuJAL-1443 modified exception notifications
2015-07-30 tcofoegbuJAL-1710 filtered colons(:) from structure chooser...
2015-07-23 Jim ProcterMerge branch 'features/JAL-1759jmolUpdate' into develop
2015-07-23 Jim ProcterJAL-1759 formatting

2015-07-23 Jim ProcterJAL-1759 reinstate changes from bdfde6ef989da0702cef90f...
2015-07-23 Jim ProcterJAL-1759 formatting
2015-07-21 tcofoegbuMerge
2015-07-21 tcofoegbuJAL-1443 bugfix to prevent loading of unidentifiable...
2015-07-16 Jim Procterrevision for JAL-1749 - ensure view 2D structure menu...
2015-07-08 gmungocJAL-1759 merge from develop
2015-07-08 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-07-08 gmungocJAL-1598 replaced faulty regex, amended Varna call...
2015-07-07 tcofoegbuJAL-1769 fixed output to jalview (.jpv) file in headles...
2015-07-07 tcofoegbuJAL-1805 test envirionment separation
2015-07-06 tcofoegbuMerge branch 'features/1769_headless-mode-test' into...
2015-07-06 tcofoegbuJAL-1769 fixed headless execution mode and created...
2015-07-03 gmungocMerge branch 'develop' into features/JAL-892varnaToProject
2015-07-03 gmungocJAL-892 1 second delay for correct initial rendering...
2015-07-02 tcofoegbuJAL-1443 data validation for empty content before loadi...
2015-07-01 gmungocJAL-1802 explanatory comment added
2015-07-01 gmungocJAL-1802 handle slide sequences edits in split frame...
2015-07-01 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate
2015-07-01 gmungocJAL-1799 deduct more space for decorators on Windows
2015-07-01 gmungocJAL-1619 align the added sequences to match what they...
2015-06-30 gmungocJAL=1759 fix Jmol state command bug; remove debug output
2015-06-30 gmungocJAL-1759 unused JmolPopup removed, code tidy for generics
2015-06-30 gmungocJAL-1759 deprecated EnfinEnvision2OneWay removed
2015-06-30 gmungocJAL-1759 unused field / methods removed
2015-06-30 tcofoegbuMerge branch 'features/JAL-1641_JSON-tests-and-docs...
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even...
2015-06-29 gmungocJAL-1799 adjusted annotation height calculation
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor
2015-06-26 gmungocMerge branch 'develop' into features/JAL-892varnaToProject
2015-06-26 gmungocJAL-1759 changed to non-deprecated Viewer.renderScreenI...
2015-06-26 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate
2015-06-26 gmungocJAL-1759 updates for Jmol 14.2.14_25.06.11
2015-06-26 tcofoegbumerge
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog...
2015-06-24 Jim ProcterMerge branch 'features/JAL-1370_patchshowunconserved...
2015-06-23 Jim ProcterJAL-1780 JAL-653 jim forgot to put the conditional... merge/develop_JAL-1780_JAL-653_JAL-1892
2015-06-23 Jim ProcterJAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports
2015-06-22 gmungocJAL-892 tidy Varna panel names; JAL-1789 simplified...
2015-06-19 gmungocJAL-892 check viewer is linked to alignment panel on...
2015-06-19 Jim ProcterJAL-653 JAL-1780 minimise call rate now av.hasHiddenRow...
2015-06-19 Jim ProcterJAL-653 JAL-1780 dropped av.setHasHiddenRows() and...
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference...
2015-06-18 gmungocJAL-1544 typos in comments
2015-06-18 gmungocJAL-892 JAL-1779 save/restore Varna viewer to/from...
2015-06-18 gmungocJAL-1695 default ENABLE_SPLIT_FRAME to true for desktop
2015-06-18 gmungocJAL-1781 annotation.sequenceRef now sequence id not... features/JAL-1781annotationXmlIds
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into...
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export...
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile
2015-06-17 tcofoegbuJAL-1780 Export settings for flatfile output
2015-06-17 gmungocJAL-1588 restore ChimeraViewFrame geometry as well
2015-06-17 gmungocJAL-1778 reinstated this.ssm to handle 'close all windo...
2015-06-15 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-15 gmungocJAL-1778 deregister as a listener when panel closed
2015-06-15 tcofoegbuJAL-1641 docs for ComplexAlignFile interface
2015-06-12 tcofoegbuJAL-1627 removed extra spaces at end of tooltip
2015-06-12 tcofoegbuJAL-1641 refactor
2015-06-10 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-10 gmungocMerge remote-tracking branch
2015-06-10 tcofoegbuJAL-1641 updated applet version
2015-06-10 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-10 gmungocJAL-1764 save Chimera/Jmol state as separate entries...
2015-06-09 tcofoegbuJAL-1488 bug-fix for incorrect start/end position in...
2015-06-06 Jim ProcterJAL-653 missing imports after rebase
2015-06-05 tcofoegbuMerge branch 'bug/JAL-1760_restore-hidden-seqs' into...
2015-06-05 tcofoegbuJAL-1760 JAL-1641 Serialisation of Hidden Seqs and...
2015-06-05 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments
2015-06-05 gmungocJAL-1752 structure highlight scoped to only its mapped...
2015-06-05 gmungocJAL-1588 error dialog if Chimera project opened on...
2015-06-05 gmungocJAL-1622 fix bug computing superposition + associated...
2015-06-05 gmungocJAL-1746 return empty string rather than null in getSta...
2015-06-05 gmungocJAL-1622 duplicate assignment removed (no functional...
2015-06-05 gmungocJAL-1753 JAL-1596 asynchronous command to Chimera ...
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code...
2015-06-05 Jim ProcterJAL-1482 refactor setTableData to more sensible name...
2015-06-04 gmungocClear status bar message when initialisation complete
2015-06-04 gmungocJAL-1622 code tidy (+Junit) of collateForPdb()
2015-06-04 gmungocJAL-1747 close all windows on Quit (+small bug fix)
2015-06-04 gmungocJAL-1750 View Mapping scoped to that viewer's mappings...
2015-06-04 gmungocJAL-1743 new Chimera menu option to 'fit to window'
2015-06-04 gmungocJAL-1743 View Chain sub-menu now being populated
2015-06-04 gmungocJAL-1753 ChimeraViewFrame hosts its own ProgressBar
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