JAL-2418 source formatting
[jalview.git] / src / jalview / io / gff /
2017-08-16 Jim ProcterJAL-2418 source formatting
2016-10-05 Jim ProcterJAL-2189 apply license
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-10-05 gmungocJAL-1191 revert to using SequenceOntologyLite due to...
2016-10-05 gmungocJAL-1191 configure full SO for desktop, SOLite for...
2016-10-05 gmungocJAL-1191 use full SO in desktop application
2016-10-05 gmungocJAL-1191 refined warning message
2016-10-05 gmungocJAL-1191 added mRNA isA transcript to SequenceOntologyL...
2016-04-14 gmungocJAL-2041 add ID,clinical_significance to feature attrib...
2016-03-22 gmungocJAL-1191 isolated SequenceOntology (BioJava wrapper...
2016-02-19 gmungocJAL-1705 JAL-1191 more terms added to hard-coded version
2016-02-12 gmungocJAL-1191 additions to SOLite, tweak to test
2016-02-12 gmungocJAL-1705 take feature ID for description if nothing...
2016-02-01 gmungocJAL-1705 further unit tests
2016-02-01 gmungocJAL-1191 more terms added to SequenceOntologyLite
2016-02-01 gmungocJAL-1705 JAL-1191 SequenceOntologyLite added as hard...
2016-01-27 gmungocJAL-1705 add exon name to features and render on peptid...
2016-01-26 gmungocJAL-1705 derive transcript sequences from gene sequence...
2016-01-25 gmungocJAL-1705 EnsemblGene added, and related refactoring
2016-01-23 gmungocJAL-1705 compute peptide variants from dna; add "conseq...
2016-01-21 gmungocJAL-653 refactor / tidy
2016-01-21 gmungocJAL-653 JAL-1705 set strand for GFF sequence feature
2016-01-21 gmungocJAL-653 comments/javadoc tidy only
2016-01-21 gmungocJAL-1705 added isSequenceVariant(), commonly used SO...
2016-01-12 gmungocJAL-1191 cache isA (great-)grandparents as well for...
2016-01-05 gmungocJAL-1191 check for obsolete term when descriptions...
2015-12-23 gmungocJAL-1191 zipped SO OBO file added to /resources, more...
2015-12-22 gmungocJAL-1191 and provide the SO OBO file in /resources :-)
2015-12-22 gmungocJAL-1191 SequenceOntology wrapping/caching SO.OBO via...
2015-12-22 gmungocJAL-1191 stub class for a SequenceOntology wrapper
2015-12-22 gmungocJAL-653 GFF new/refactored helper classes