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format adapter should return AlignmentI
[jalview.git] / src / jalview / util /
2012-11-17 jprocterstore chaincode on pdbentry tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-10-03 jprocterformatting tree | commitdiff
2012-08-28 jprocterJAL-1149 patch tree | commitdiff
2012-03-01 jprocterMerge branch 'Release_2_7_Branch' into develop tree | commitdiff
2011-12-08 jproctersimple escape utility class for JAL-1023 patch tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_... tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-08-19 jprocterJAL-908 JAL-701 refactored HTML escape/unescape code... tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-05-30 jprocterfirst patch for JAL-838 - allow new typed of PID calcs tree | commitdiff
2010-09-23 jprocterapply jalview code style tree | commitdiff
2010-09-23 jprocterJalview 2.6 source licence tree | commitdiff
2010-09-10 jprocterearly bail out for long urls, and threaded off group... tree | commitdiff
2010-09-09 jprocterwrap tooltips and revise layout (JAL-644) tree | commitdiff
2010-04-30 jprocterjalview 2.5 release banner tree | commitdiff
2010-04-02 jproctercli length limit tree | commitdiff
2010-04-02 jprocterurllength limit and more efficient url construction tree | commitdiff
2010-03-26 jproctersync for cvs wierdness tree | commitdiff
2010-03-26 jproctersync for cvs wierdness tree | commitdiff
2010-02-09 jproctertoken replacement engine for generation of urls for... tree | commitdiff
2010-02-09 jprocterqsort objects on integers tree | commitdiff
2009-07-24 jprocterheadless test tree | commitdiff
2009-06-19 jprocterdebug comments tree | commitdiff
2009-06-19 jprocternew coverage comparison - no test case in main method yet tree | commitdiff
2009-06-12 jprocterjavadoc tree | commitdiff
2009-06-08 jprocterapply gpl development license tree | commitdiff
2009-02-24 jprocterallow label to be set independently of parsed input... tree | commitdiff
2008-11-12 jprocterjar inputstream provider enabling multiple jar entries... tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-08-11 jprocterregular expression based URL link generation tree | commitdiff
2008-08-01 jproctertodo tree | commitdiff
2007-11-30 jprocterbugfixed MapList (must be propagated to vamsas version... tree | commitdiff
2007-10-26 jprocternew applet and application utility class for platform... tree | commitdiff
2007-10-24 jprocteradd parsed PDB reference to sequences tree | commitdiff
2007-09-29 jprocterjavadoc tree | commitdiff
2007-09-07 jprocteradded a more general DBRef search interface tree | commitdiff
2007-07-25 jprocteruniprot synonym tree | commitdiff
2007-07-13 jprocternew search method for finding references like other... tree | commitdiff
2007-07-13 jprocterbugfix and comments tree | commitdiff
2007-06-18 jprocter1.1 methods tree | commitdiff
2007-05-02 jprocterfixed getIntervals bug to ensure it returns range from... tree | commitdiff
2007-04-30 jprocterjavadoc tree | commitdiff
2007-04-26 jprocterdouble sort functions tree | commitdiff
2007-04-25 jproctermoving word methods to MapList and begin bug-fix for... tree | commitdiff
2007-04-17 jprocterproper copy constructor (not clone) tree | commitdiff
2007-04-02 amwaterhouseaddElement tree | commitdiff
2007-03-23 jprocterremoved Iterator usage. tree | commitdiff
2007-03-19 jprocterNew method for mapping from common database sources... tree | commitdiff
2007-03-19 jproctermapping implemented by MapList added to DBRefEntry. tree | commitdiff
2007-02-07 amwaterhouseFormatting tree | commitdiff
2007-01-25 jprocterchecks for irreflexive mapping in main tester tree | commitdiff
2007-01-24 jprocterkkv change tree | commitdiff
2007-01-24 jprocterMap arbitrary series of non-overlapping integer interva... tree | commitdiff
2006-12-21 amwaterhouseremove unnecessary import tree | commitdiff
2006-12-05 amwaterhousesequence is char [] tree | commitdiff
2006-10-24 amwaterhouseRemove unneccessary import tree | commitdiff
2006-10-24 amwaterhouseMake everything final tree | commitdiff
2006-08-22 amwaterhousemake 1.1 compatible tree | commitdiff
2006-08-22 jprocterhidden region recovery in JPred and new hidden region... tree | commitdiff
2006-08-21 amwaterhouseheader updated tree | commitdiff
2006-08-21 amwaterhouse1.1 compatible tree | commitdiff
2006-08-21 jprocterinverse ShiftList and SequenceI.gapMap->ShiftList methods. tree | commitdiff
2006-08-09 jprocterfixed multiple shifts bug. tree | commitdiff
2006-08-07 amwaterhouse1.1 compatible tree | commitdiff
2006-08-04 jprocterrecover original data for tree and pca as alignment... tree | commitdiff
2006-07-26 jprocterIgnore list created tree | commitdiff
2006-07-21 amwaterhouseDBRefs now array tree | commitdiff
2006-07-18 amwaterhouseTakes strings, not seqs tree | commitdiff
2006-07-07 amwaterhouseOptimised PID method tree | commitdiff
2006-06-08 jprocterIntroduced DbRefEntry to DasSourceCoordinateSystem... tree | commitdiff
2006-06-07 amwaterhouseNEW FILES tree | commitdiff
2006-03-14 jproctermethods for searching DBRef lists tree | commitdiff
2005-12-22 amwaterhouseRemove main method tree | commitdiff
2005-12-12 amwaterhouse Check if user cancelled before making image tree | commitdiff
2005-12-06 amwaterhouseafter merge tree | commitdiff
2005-09-30 amwaterhouseRemove redundancy in Eclipse tree | commitdiff
2005-08-18 jproctermade changes to DEFAULT_BROWSER in user preferences... tree | commitdiff
2005-08-18 jproctervarious case sensitivity bugs fixed in residue comparis... tree | commitdiff
2005-08-15 amwaterhouseisGap slightly more efficient tree | commitdiff
2005-08-09 amwaterhouseCache.getDefault tree | commitdiff
2005-06-30 amwaterhouseFormatting changes tree | commitdiff
2005-06-08 amwaterhouseFormatted source tree | commitdiff
2005-06-08 amwaterhouseGPL license added tree | commitdiff
2005-06-07 jprocteradded a couple of debug statements for unix browser... tree | commitdiff
2005-06-05 jprocterfirefox now default for unixen. tree | commitdiff
2005-06-03 jprocterReinstated 'create tree from selected region only'... tree | commitdiff
2005-06-02 jprocterminor changes to make jalopy happy tree | commitdiff
2005-05-31 jprocterMoved comment so it doesn't break jalopy (this is not... tree | commitdiff
2005-05-30 jproctercomments tree | commitdiff
2005-05-27 jprocterAddred GapChar string for convenient regex construction tree | commitdiff
2005-05-25 amwaterhousegetHexString added tree | commitdiff
2005-05-25 jprocteradded jalview.browser property so a linux user can... tree | commitdiff
2005-03-23 amwaterhouseno longer used tree | commitdiff
2005-03-08 jprocterfixed interface for PID method. tree | commitdiff
2005-01-24 amwaterhousebug in compare fixed tree | commitdiff
2004-12-16 amwaterhouseilen and jlen no longer +1 tree | commitdiff
2004-12-15 amwaterhouseisGap method added to utils tree | commitdiff
2004-11-02 amwaterhouseJalview Imported Sources start tree | commitdiff