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[jalview.git] / src / jalview / ws /
2009-02-24 jprocterbugfix the bugfix tree | commitdiff
2009-02-24 jprocterbug fixes (infinite loop when fetcher given same sequen... tree | commitdiff
2009-01-08 jprocterrefactor tree | commitdiff
2008-12-19 jproctersimple transformation of feature types like dbref and... tree | commitdiff
2008-12-19 jproctertodo tree | commitdiff
2008-12-19 jprocterwsdbfetch parameter change again (uniprotkb is dbname... tree | commitdiff
2008-12-08 jprocterDAS feature scores are parsed into floats on sequence... tree | commitdiff
2008-12-04 jprocterfetch database references for all EBI db + selected... tree | commitdiff
2008-12-04 jproctersequence fetchers generated for local das sequence... tree | commitdiff
2008-12-04 jprocterminimise exceptions for bad uniprot ids tree | commitdiff
2008-12-04 jprocterselect source by implementation class tree | commitdiff
2008-12-04 jprocterfix null pointer exception for sources which don't... tree | commitdiff
2008-11-12 jprocterbugfix to safely deal with server exception resulting... tree | commitdiff
2008-11-04 jprocterbugfix db ref retrieve routine so it removes dead query... tree | commitdiff
2008-11-04 jprocterimplemented embl validation properly tree | commitdiff
2008-11-04 jprocterimplemented embl validation properly tree | commitdiff
2008-09-09 jprocterlinks associated with non-positional features do not... tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-08-26 jprocterupdate Jpred3 service referenec tree | commitdiff
2008-08-26 jprocteruses shared singleton from jalview.gui.SequenceFetcher... tree | commitdiff
2008-08-26 jprocterpdb xrefs added as dbrefs and as PDB file links tree | commitdiff
2008-08-15 jprocterxrefs retrieved from Uniprot tree | commitdiff
2008-08-06 jprocterextra checks for datasetsequence for when getDbRefs... tree | commitdiff
2008-08-04 jprocterstackoverflow fix tree | commitdiff
2008-08-04 jprocterpfam seed and full alignment retrieval and nicer orderi... tree | commitdiff
2008-08-01 jprocterupdated jalview version of dasobert 1.53e client and... tree | commitdiff
2008-07-31 jprocterrefactored method for registering instance of a dbSourc... tree | commitdiff
2008-07-31 jprocterquick fix for the new uniprot name schema - description... tree | commitdiff
2008-07-31 jprocteradded specific retrieval arguments to SequneceFetcher... tree | commitdiff
2008-05-26 jprocterUniprot is not actually a multi-acc capable source... tree | commitdiff
2008-05-26 jprocterbugfix so MULTI_ACC capable sources value property... tree | commitdiff
2008-04-29 jprocteradded SeqSearch service interface. Documented and refac... tree | commitdiff
2008-04-17 jprocterbugfix for refactoring (webservice windows wouldn't... tree | commitdiff
2008-04-17 jprocterjavadoc and refactor of setWebService method to allow... tree | commitdiff
2008-04-17 jprocterjavadoc for webservice client tutorial tree | commitdiff
2008-04-17 jproctertodos tree | commitdiff
2008-04-11 jprocterfix JPred thread so job aborts if submission fails. tree | commitdiff
2008-02-22 jprocterexplicit quote of chaincode in errror message tree | commitdiff
2008-01-22 jprocterensured that seqeunce feature shift takes into account... tree | commitdiff
2007-12-21 jprocteruniprotxml format comment (ebi changed service parameter) tree | commitdiff
2007-12-21 jproctersequence db fetcher and db reference validation/annotat... tree | commitdiff
2007-11-16 jproctertypo tree | commitdiff
2007-11-16 jprocterjavadoc tree | commitdiff
2007-11-16 jprocteradded generic method for adding new database proxies... tree | commitdiff
2007-11-16 jprocterrefactored ebi soap client and AbstractSequenceFetcher... tree | commitdiff
2007-11-16 jprocterrefactor abstract sequence fetching and DBSource machin... tree | commitdiff
2007-11-12 jprocteradded mechanism to initiate DAS feature fetching progra... tree | commitdiff
2007-10-31 jprocterfactored out reference to parent alignFrame (so all... tree | commitdiff
2007-10-29 jprocterbugfix for alignments without aligned codon frames tree | commitdiff
2007-10-24 jprocterindividual query error/exception report and bugfix tree | commitdiff
2007-09-29 jprocteralways update PDBEntry list if DBRefEntries might have... tree | commitdiff
2007-09-29 jprocteruse pdb refsource string tree | commitdiff
2007-09-10 jprocterensure dbrefs are added to dataset sequence. tree | commitdiff
2007-08-30 jprocterrefactored and ensured alCodonMappings are propagated... tree | commitdiff
2007-08-24 jprocterremove null pointer exception when embl file is not... tree | commitdiff
2007-08-08 jproctergeneralise name of prediction method tree | commitdiff
2007-07-13 jprocternew DBRef management and generalised source and entry... tree | commitdiff
2007-02-07 amwaterhouseFormatting tree | commitdiff
2007-01-25 amwaterhouseCommand takes alignment, not gapChar tree | commitdiff
2007-01-18 amwaterhouseFile Parsing returns Alignments, not Sequence[] tree | commitdiff
2006-12-21 amwaterhouseremove unnecessary import tree | commitdiff
2006-12-05 amwaterhouseSequence is char [] tree | commitdiff
2006-11-30 amwaterhouseindexOf replaces contains tree | commitdiff
2006-11-30 jprocterfix bad grammar in new alignment title tree | commitdiff
2006-11-08 amwaterhouseRemove unnecessary imports tree | commitdiff
2006-10-24 amwaterhouseUses RemoveGapsCommand tree | commitdiff
2006-10-24 amwaterhouseRemove variables not used tree | commitdiff
2006-10-06 jprocterAdded filter so that input to a JPred job is *solely... tree | commitdiff
2006-10-05 amwaterhouseAlignFrame must take width and height tree | commitdiff
2006-08-22 jprocterhidden region recovery in JPred and new hidden region... tree | commitdiff
2006-08-21 amwaterhouseheader updated tree | commitdiff
2006-08-21 jprocterRefactored Jnet and added hidden columns support. tree | commitdiff
2006-08-21 jprocteravoid null pointer exceptions tree | commitdiff
2006-08-17 jproctermoved visible sub-alignment extraction and update from... tree | commitdiff
2006-08-15 jprocterfirst stage of adapting JNet client to hidden regions... tree | commitdiff
2006-08-15 jprocterfixed alignment ordering name. tree | commitdiff
2006-08-15 amwaterhouseWRITEABLE_FORMATS and READABLE_FORMATS string [] tree | commitdiff
2006-08-14 jprocterrefactored to create generic polling thread and subjobs tree | commitdiff
2006-08-14 jproctermultiple subjobs can be cancelled and gui only allows... tree | commitdiff
2006-08-14 jprocterfixing residue clip bug in MsaWSThread and adding minim... tree | commitdiff
2006-08-13 jprocterfixed end-residue bug and subjob panel names bug tree | commitdiff
2006-08-11 jproctermultiple web service jobs from visible blocks of an... tree | commitdiff
2006-08-04 jprocterrecover original data for tree and pca as alignment... tree | commitdiff
2006-07-26 jprocterIgnore list created tree | commitdiff
2006-07-19 amwaterhouseMerge new frame buttons added tree | commitdiff
2006-05-17 jprocterrefactored code for creating JNet annotations tree | commitdiff
2006-05-16 jprocteradded popup warning when proxy settings must be configured. tree | commitdiff
2006-05-12 jprocterrearranged discoverer to dynamically update on demand tree | commitdiff
2006-05-10 amwaterhouseAnnotations must createSequenceMapping if seqRef not... tree | commitdiff
2006-04-06 amwaterhouseMust copy feature settings from one frame to another... tree | commitdiff
2006-04-06 amwaterhouseMust copy feature settings from one frame to another... tree | commitdiff
2006-03-20 amwaterhouseCorrect reference tree | commitdiff
2006-03-08 amwaterhouseIdentifyFile should not be static tree | commitdiff
2006-02-24 amwaterhouseAdd Annotation to specific sequence tree | commitdiff
2005-12-22 amwaterhouseAnnotations.Graph can be bargraph, linegraph tree | commitdiff
2005-12-08 jproctermodified jnet parsing exception report string. tree | commitdiff
2005-12-08 amwaterhouseAfter merge tree | commitdiff
2005-12-06 amwaterhouseafter merge tree | commitdiff
2005-09-30 amwaterhouseRemove redundancy in Eclipse tree | commitdiff
2005-09-22 amwaterhouseCreate Instance of FormatAdapter tree | commitdiff
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