create method to test HMM model as string
[jalview.git] / test / jalview / datamodel / AlignmentTest.java
2017-05-15 Jim ProcterJAL-2507 fix test: knockon from capitalisation on secon... bug/JAL-2507_rnasecstrstockholm
2017-04-27 Jim ProcterJAL-2494 test to cover AnnotatedCollectionI.findAnnotat...
2017-03-31 gmungocJAL-2405 additional checks for circular reference in...
2017-03-17 kiramtJAL-2437 Synchronization corrections and unit tests
2017-01-06 gmungocMerge branch 'develop' into features/JAL-2360colourSche...
2017-01-05 gmungocJAL-2374 unit test for (modified) Alignment.findGroup()
2016-12-21 gmungocJAL-2360 Javadoc and test cases for findAnnotation
2016-11-28 gmungocMerge branch 'develop' into trialMerge
2016-11-25 gmungocMerge branch 'develop' into trialMerge
2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 format tests
2016-10-04 gmungocJAL-2232 added test that failed before last fix, passes...
2016-08-30 Jim ProcterJAL-2154 javadoc, fix underloaded version of assertData...
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum
2016-08-29 Jim ProcterJAL-2154 Optional message parameter for assertDatasetNo...
2016-08-29 Jim ProcterJAL-2154 new assertDatasetIsNormalised to trivially...
2016-08-29 Jim ProcterJAL-2154 additional test that removing a duplicate...
2016-08-22 Jim ProcterJAL-2154 always check dataset sequence for sequence...
2016-08-22 Jim ProcterJAL-2154 patch verifyAlignment so it fails for duplicat...
2016-08-22 Jim ProcterJAL-2154 tidy assert messages and fix test to verify...
2016-08-22 Jim ProcterJAL-2154 test that verifyAlignment fails for duplicate...
2016-08-19 Jim ProcterJAL-2154 testNG like assertAlignmentDatasetRefs static...
2016-08-16 Jim ProcterJAL-2154 verify sequenceI/dataset refs for codonmappings
2016-08-16 Jim ProcterJAL-2154 check alignment isn’t null before validating
2016-08-16 Jim ProcterJAL-2154 new assert to check reference integrity for...
2016-08-04 Jim ProcterJAL-2154 make sure all sequences referenced via DBRefEn...
2016-07-18 Jim ProcterJAL-2110 JAL-2145 fix out of date test for 2baee069f9ed...
2016-07-11 gmungocfile format enum wip changes
2016-07-06 gmungocJAL-2110 AlignmentUtils.alignCdsAsProtein implemented
2016-06-20 Jim ProcterJAL-2110 copy alcodonframes only if copy constructor...
2016-06-19 Jim ProcterJAL-2110 JAL-2131 JAL-1765 remove reference to jalview...
2016-04-11 tcofoegbuJAL-2054 Renamed getStartEnd in AlignFrame to getVisibl...
2016-04-01 gmungocJAL-1705 reworked AlignmentUtils.makeCdsAlignment and...
2016-01-05 gmungocJAL-653 updating 'align as' tests to match latest tweak...
2015-12-22 gmungocJAL-653 realise virtual mappings and align when adding...
2015-12-03 gmungocJAL-653 mappings always reside on the dataset alignment...
2015-11-30 gmungocJAL-1270 constructor test added
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-14 gmungocJAL-1880 handle sequence offsets properly when mapping...
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 licencing for new files in test and utils
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-07-23 tcofoegbuJAL-1805 modified test setup's so the are ran for group...
2015-07-08 gmungocJAL-1759 merge from develop
2015-07-07 tcofoegbuJAL-1805 test envirionment separation
2015-06-23 Jim ProcterJAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-19 tcofoegbuJAL-1270 test suits import order refactor features/JAL-1270_JUnit-to-TestNG features/JAL-1782_JUnit-to-TestNG
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2014-10-13 gmungocJAL-1264 unneeded setup removed
2014-10-13 gmungocJAL-1264 unit test corrected
2014-10-10 gmungocJAL-1264 unit tests