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Merge branch 'releases/Release_2_11_1_Branch'
[jalview.git]
/
test
/
jalview
/
io
/
2017-02-21
gmungoc
JAL-2416 support roundtrip print/parse of ScoreMatrix
tree
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commitdiff
2017-02-17
gmungoc
JAL-2416 allow space in score matrix name
tree
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commitdiff
2017-02-14
gmungoc
Parsing moved to (new) ScoreMatrixFile, drag and drop...
tree
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commitdiff
2017-01-31
gmungoc
JAL-2371 rename global/viewportColourScheme to residueS...
tree
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commitdiff
2017-01-31
gmungoc
JAL-2385 more tests/bug fixes mostly for gui.SliderPane...
tree
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commitdiff
2017-01-27
gmungoc
JAL-2360 JAL-2371 updates from review CR-JAL-1
tree
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commitdiff
2017-01-26
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-26
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-26
gmungoc
JAL-2344 test fix and code tidy for review comments
tree
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commitdiff
2017-01-17
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-17
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-12
gmungoc
JAL-2344 now flagging formats as 'identifiable' instead...
tree
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commitdiff
2017-01-11
gmungoc
JAL-2344 FileFormats singleton for formats, FileFormatI...
tree
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commitdiff
2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
tree
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commitdiff
2016-12-20
gmungoc
JAL-2360 ColourSchemes holds configured schemes, AlignF...
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 getColour() renamed to getColourScheme(),...
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
tree
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commitdiff
2016-12-12
gmungoc
JAL-2361 extract methods to (re-)build colour menu
tree
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commitdiff
2016-11-28
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2016-11-28
gmungoc
JAL-2345 cache generated ImageIcon per file path
tree
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commitdiff
2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2016-11-25
gmungoc
JAL-2344 correct roundtrip test to exclude Jalview...
tree
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commitdiff
2016-11-24
tcofoegbu
JAL-2326 added setup method for JvOptionPane in all...
features/JAL-2326_JOptionPane-refactoring
tree
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commitdiff
2016-11-24
gmungoc
Further tweaks to get tests passing
tree
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commitdiff
2016-11-16
Jim Procter
Merge branch 'features/JAL-1723_sequenceReport' into...
tree
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commitdiff
2016-11-14
tcofoegbu
JAL-2322 Refactored unified architecture for data ...
tree
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commitdiff
2016-11-11
tcofoegbu
JAL-2277 Refactored out duplicated method - printUnwrap...
tree
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commitdiff
2016-11-07
gmungoc
JAL-1805 groups=Functional added where missing
tree
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commitdiff
2016-11-03
kiramt
JAL-2308 Fixed hiddenColsTest
bug/JAL-2308
tree
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commitdiff
2016-11-03
tcofoegbu
JAL-2312 unit test for bug fix - repeated mapping gener...
tree
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commitdiff
2016-10-31
gmungoc
Merge branch 'develop' into features/JAL-1723_sequenceR...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 apply license
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 format tests
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2235 patch tests where self-reference was used...
tree
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commitdiff
2016-09-19
Jim Procter
JAL-2175 JAL-2170 fix sense for assertEquals
tree
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commitdiff
2016-09-19
tcofoegbu
merge
tree
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commitdiff
2016-09-16
Jim Procter
JAL-2164 update asserts for padded residue numbers...
tree
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commitdiff
2016-09-13
tcofoegbu
Revert "JAL-2164 JAL-1919 disabled and removed PDB...
tree
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commitdiff
2016-09-13
tcofoegbu
JAL-2164 JAL-1919 disabled and removed PDB file parser...
tree
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commitdiff
2016-09-07
Jim Procter
Merge branch 'develop' into bug/JAL-1803_JAL-2157
tree
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commitdiff
2016-09-07
Jim Procter
JAL-1803 switched so ‘expected’ is constant in assert
tree
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commitdiff
2016-09-07
gmungoc
JAL-2164 fix failing test
tree
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commitdiff
2016-09-04
Jim Procter
JAL-1803 patch test: PDBEntry.getFile() will always...
tree
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commitdiff
2016-09-01
gmungoc
JAL-1421 add generics to NJTree, refactor recursive...
tree
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commitdiff
2016-08-30
Jim Procter
JAL-2154 doc & AssertError trap for known failure case...
tree
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commitdiff
2016-08-30
gmungoc
Merge branch 'develop' into features/filetypeEnum
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 endless loop fixed (hopefully :) )
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 catch insertion of duplicate CDS after retriev...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 ENSEMBL and Uniprot tests
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 report any db fetch failures as a fail at end
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 ensure pass increments actually result in...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 catch and report a failures when xrefed projec...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 Defer failing cross-ref combinations that...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 check that CDS panel is only nucleotide, and...
tree
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commitdiff
2016-08-23
Jim Procter
Merge branch 'develop' into bug/JAL-2154projectMappings
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 - rejig test pass code for breadth-first ...
tree
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commitdiff
2016-08-22
gmungoc
JAL-2175 code/test fixes/tidy for PFAM/MSF/JSON roundtrip
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 major rejigging of test looping again
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 disable DAS sources for Jalview2XML tests
tree
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commitdiff
2016-08-19
tcofoegbu
JAL-1803 unit test for PDB chainCode save/restore from...
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 fix looping structure so for a particular...
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 drop unused hashes
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 testNG like assertAlignmentDatasetRefs static...
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 use right reference string for recovering...
tree
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commitdiff
2016-08-16
Jim Procter
JAL-2154 [test] verify reference integrity for alignmen...
tree
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commitdiff
2016-08-16
Jim Procter
JAL-2154 formatting
tree
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commitdiff
2016-08-16
Jim Procter
JAL-2154 xref test harness - test fails if there are...
tree
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commitdiff
2016-08-15
tcofoegbu
JAL-1919 Added improvement to ensure consistence of...
tree
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commitdiff
2016-08-13
Jim Procter
JAL-2154 refactor CrossRef UI code to its own class
tree
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commitdiff
2016-08-13
Jim Procter
JAL-2154 check if the desktop is constructed before...
tree
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commitdiff
2016-08-11
Jim Procter
JAL-2154 clear the desktop before every 2xml test
tree
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commitdiff
2016-08-11
Jim Procter
JAL-2154 refactor setup/teardown from Jalview2xml for...
tree
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commitdiff
2016-08-05
gmungoc
JAL-1448 always use UK locale for formatted date properties
tree
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commitdiff
2016-08-04
gmungoc
JAL-2164 changed to be Java 1.7 compliant
tree
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commitdiff
2016-08-01
Jim Procter
JAL-2164 TODO: make test pass for JMOL_PARSER
tree
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commitdiff
2016-08-01
Jim Procter
JAL-2164 JAL-1919 JAL-1270 use structure import setting...
tree
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commitdiff
2016-08-01
Jim Procter
JAL-2164 prevent jalview news from opening
task/JAL-2164_mcviewforoldjalviewprojects
tree
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commitdiff
2016-08-01
Jim Procter
JAL-2164 clear the desktop before testStoreAndRecoverEx...
tree
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commitdiff
2016-08-01
Jim Procter
JAL-1772 make sure we actually return reference to...
tree
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commitdiff
2016-07-29
Jim Procter
JAL-1772 JAL-2164 make expanded view save/restore test...
tree
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commitdiff
2016-07-29
Jim Procter
JAL-2164 revert tests depending on import of legacy...
tree
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commitdiff
2016-07-29
tcofoegbu
JAL-2157 fixed Jalview2xmlTest
tree
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commitdiff
2016-07-21
Jim Procter
Merge branch 'apifix/JAL-1926_JAL-2106' into develop
tree
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commitdiff
2016-07-19
tcofoegbu
JAL-1919 set default structure file format to mmCIF...
tree
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commitdiff
2016-07-11
gmungoc
file format enum wip changes
tree
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commitdiff
2016-07-08
tcofoegbu
JAL-1919 Fixed failing tests, enabled HETATM processing...
tree
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commitdiff
2016-06-29
tcofoegbu
JAL-1479 added test case to elaborate getEntityByMostOp...
tree
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commitdiff
2016-06-29
gmungoc
JAL-1369 fix bug reloading a project with group sequenc...
tree
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commitdiff
2016-06-28
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2016-06-28
tcofoegbu
JAL-1479 improved SiftsClient test coverage and impleme...
tree
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commitdiff
2016-06-27
gmungoc
JAL-1369 additional asserts in testStoreAndRecoverRefer...
tree
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commitdiff
2016-06-21
Jim Procter
Merge branch 'features/JAL-1956_featureStyles' into...
tree
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commitdiff
2016-06-21
Jim Procter
JAL-1270 ensure before/after clauses have at least...
tree
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commitdiff
2016-06-21
Jim Procter
JAL-1369 make sure desktop is cleared before test starts
tree
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commitdiff
2016-06-21
Jim Procter
JAL-1369 jalview2xml tests need to be run sequentially
tree
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commitdiff
2016-06-21
Jim Procter
JAL-1369 fix the test
tree
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commitdiff
2016-06-20
Jim Procter
JAL-1369 failing test
tree
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commitdiff
2016-05-30
gmungoc
JAL-1670 JAL-2018 updated unit test for added example...
tree
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commitdiff
next