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JAL-1725 first version of Jetty server / chimera selection listener
[jalview.git] / test / jalview / io /
2015-03-26 tcofoegbuUpdated BioJsHTMLOutputTest asserts to include error... tree | commitdiff
2015-03-26 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source... tree | commitdiff
2015-03-26 tcofoegbuModified BioJsHTMLOutputTest to test specific json... tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-15 Charles OfoegbuJAL-1667 updated test and internationalization messages tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-01-23 Jim ProcterJAL-1541 changed assert to JUnit assert - test now... tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 tweak signature of core annotation printer... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 new entry point for reading annotation files... tree | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 tree | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-11-27 Jim ProcterMerge branch 'patchJAL-674_offset' into develop tree | commitdiff
2014-11-27 Jim ProcterJAL-674 bug in test tree | commitdiff
2014-11-27 Jim ProcterJAL-674 test that PDB annotation created when importing... tree | commitdiff
2014-11-27 Jim ProcterJAL-674 patch NPE bug when test run in isolation tree | commitdiff
2014-11-27 Jim ProcterJAL-674 fix test properties path and add properties... tree | commitdiff
2014-11-23 Jim ProcterMerge branch 'JAL-1569_wuss_vienna_broke' into develop tree | commitdiff
2014-11-23 Jim ProcterJAL-1569 refactoring of stockholm test tree | commitdiff
2014-11-23 Jim ProcterJAL-1569 revise tests to count number and type of annot... tree | commitdiff
2014-11-14 Charles OfoegbuHouse keeping tree | commitdiff
2014-11-03 Jim ProcterJAL-674 peptide structure input so test is not dependen... tree | commitdiff
2014-10-31 Jim ProcterJAL-674 JAL-961 pass row reference to handler to check... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 methods and test for PDB derived annotation... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 test for the test for presence of annotation... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 test for duplicate alignment annotation rows... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 test to ensure sequence and annotation on seque... tree | commitdiff
2014-10-06 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-429_phylip... tree | commitdiff
2014-10-06 Jim ProcterJAL-1286 missing file for testcase where file ends... tree | commitdiff
2014-10-03 Charles OfoegbuIntegration of David Corsars Phylip File support tree | commitdiff
2014-10-03 Charles Ofoegburemoved local test data tree | commitdiff
2014-10-03 Charles OfoegbuLocal branch test tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-05-12 Jim ProcterMerge branch 'JAL-1397' into develop tree | commitdiff
2014-05-12 Jim Procterpatch for regression introduced JAL-1397 tree | commitdiff
2014-05-02 Jim ProcterMerge branch 'JAL-1397' into develop tree | commitdiff
2014-05-01 Jim ProcterJAL-1397 (probably buggy) test for recovery of backgrou... tree | commitdiff
2014-05-01 Jim Procterproperly quit so JUnit marks tests as successful tree | commitdiff
2014-04-27 Jim ProcterMerge branch 'JAL-952_rnahelix' into develop tree | commitdiff
2014-04-27 Jim Proctertest for JAL-952 tree | commitdiff
2014-04-25 Jim ProcterMerge branch 'JAL-1177_prop_rnasecstr' into develop tree | commitdiff
2014-04-25 Jim Proctertest for JAL-1268 tree | commitdiff
2014-04-25 Jim Proctertest for JAL-1177 store and recover RNA secondary struc... tree | commitdiff
2014-04-21 Jim ProcterMerge branch 'jims_marckhacks' into develop tree | commitdiff
2014-04-21 Jim ProcterJAL-1478 test to demonstrate bug tree | commitdiff
2014-02-20 Jim ProcterMerge branch 'JAL-1447' into develop tree | commitdiff
2014-02-20 Jim Proctertest and data for JAL-1447 tree | commitdiff
2014-02-20 Jim ProcterJAL-1447 - more flexible testing for file format Identi... tree | commitdiff
2014-02-18 Jim ProcterMerge branch 'JAL-1445' into develop tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2013-11-07 Jim ProcterMerge branch 'JAL-1286' into develop tree | commitdiff
2013-11-07 Jim ProcterJAL-1286 additional tests to ensure that non-GZ files... tree | commitdiff
2013-11-07 Jim ProcterJAL-1286 test input of gzip stream from local file tree | commitdiff
2013-06-21 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2 tree | commitdiff
2013-06-21 Jim ProcterMerge branch 'JAL-1294_iupredexportimport' into develop tree | commitdiff
2013-06-21 Jim ProcterJAL-1325 formatting tree | commitdiff
2013-06-21 Jim ProcterJAL-1294 JAL-1325 test annotation threshold line equiva... tree | commitdiff
2013-06-14 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2 tree | commitdiff
2013-06-14 Jim ProcterMerge branch 'JAL-1316' into develop tree | commitdiff
2013-06-14 Jim ProcterJAL-1316 JAL-1313 newick IO test harness tree | commitdiff
2013-06-07 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2 tree | commitdiff
2013-06-07 Jim ProcterMerge branch 'JAL-1161_optimisingAnnotationPanel' into... tree | commitdiff
2013-05-24 Jim ProcterMerge branch 'menard' into develop_m2_8_1_2 tree | commitdiff
2013-05-24 Jim ProcterJAL-1300 test and example data for parsing annotation... tree | commitdiff
2013-05-24 Jim ProcterJAL-1295 relaxed test for Annotation element equivalenc... tree | commitdiff
2013-05-24 Jim ProcterJAL-1295 JAL-1296 clearer assertion failed message tree | commitdiff
2013-05-24 Jim ProcterJAL-1295 JAL-1297 enhance test to check graph visiblity... tree | commitdiff
2013-05-24 Jim ProcterJAL-1296 JAL-1291 JAL-1297 JAL-1295 JAL-1294 tree | commitdiff
2013-05-24 Jim ProcterJAL-1291 JAL-1297 JAL-1295 JAL-1294 allow alignment... tree | commitdiff
2013-05-24 Jim ProcterJAL-1297 JAL-1295 JAL-1294 improve test logic for compa... tree | commitdiff
2013-05-21 Jim ProcterMerge branch 'JAL-1199-Stk_writing' into Release_2_8_Branch tree | commitdiff
2013-05-21 Jim Proctersplit test for general Stockholm IO consistency (JAL... JAL-1199-Stk_writing tree | commitdiff
2013-05-21 Jim ProcterJAL-1199 JAL-1272 remove main() method from test class tree | commitdiff
2013-05-21 Jim Procterformatting tree | commitdiff
2013-05-21 Jim ProcterJAL-1199 JAL-1272 refactored Natasha's test to a generi... tree | commitdiff
2013-05-13 Jim ProcterJAL-1286 URL stream reader tries to use a GZIPInputStre... tree | commitdiff
2013-04-12 Jim ProcterJAL-1286 URL stream reader tries to use a GZIPInputStre... tree | commitdiff
2013-02-15 Jim ProcterJAL-1140 JAL-1215 JAL-1272 test import of RNAML and... tree | commitdiff
2013-02-15 Jim Proctersplit test for general Stockholm IO consistency (JAL... tree | commitdiff
2013-02-15 Jim ProcterJAL-1199 JAL-1272 remove main() method from test class tree | commitdiff
2013-02-15 Jim Procterformatting tree | commitdiff
2013-02-15 Jim ProcterJAL-1199 JAL-1272 refactored Natasha's test to a generi... tree | commitdiff
2013-02-14 Jim ProcterMerge branch 'JAL-1199-Stk_writing' into rnaml_test tree | commitdiff
2013-02-13 jprocterfix merge conflicts for finess on JAL-1140 (introduced... tree | commitdiff
2013-02-06 jprocterJAL-1199 added test for Rfam Stockholm file example tree | commitdiff
2013-02-06 jprocterJAL-1199 refactored stockholm test code from main class... tree | commitdiff
2012-12-07 jprocterproxy commit for Anne Menard <menard.annec@gmail.com... tree | commitdiff
2012-12-04 jprocterJAL-1140 - IO classes should only raise generic IOExcep... tree | commitdiff
2012-11-18 jprocterJAL-1205 JAL-1140 generalised exception for Anne's... tree | commitdiff
2012-11-17 jprocterMerge branch 'develop' into menard tree | commitdiff
2012-11-15 Paolo Di TommasoFixed T-Coffee file scores parser to support extended... tree | commitdiff
2012-11-15 jprocterMerge branch 'develop' into menard tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-08-14 Anne Menardlast version stay many bugs .. tree | commitdiff
2012-07-10 Anne Menardv2 tree | commitdiff
2012-07-05 Anne MenardAdd support RNAML format tree | commitdiff
2012-05-23 jprocterJAL-1067, JAL-1105 - refactor parser to fit Jalview... tree | commitdiff
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065... tree | commitdiff