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JAL-2629 fix expected length error for hmmbuild by uniquifying sequences
[jalview.git] / test / jalview / ws /
2017-05-23 Jim ProcterJAL-2549 RNAAliFold result to annotation file roundtrip... features/JAL-2549_updateJABAWSto220 tree | commitdiff
2017-05-23 Jim ProcterJAL-2549 skip ‘Unrecognised Service’ which resolves... tree | commitdiff
2017-05-23 Jim ProcterJAL-2549 replace JABAWS 2.1 with 2.2 client and remove... tree | commitdiff
2017-05-15 Jim ProcterJAL-2311 disable and relocate Jared service tests to... tree | commitdiff
2017-05-15 Jim ProcterJAL-2507 - required callers to specify exact ignore... tree | commitdiff
2017-05-03 gmungocJAL-2246 basic sanity test of fetching example accessions tree | commitdiff
2017-05-03 gmungocJAL-2246 test a Uniprot fetch tree | commitdiff
2017-05-03 gmungocJAL-2485 JAL-2246 test Uniprot FTS summary tree | commitdiff
2017-05-01 tcofoegbuJAL-2482 unit test for bug fix tree | commitdiff
2017-04-11 kiramtJAL-2479 Moved some network-dependent unit tests into... bug/JAL-2479unitteststoNetworkGroup tree | commitdiff
2017-04-03 gmungocJAL-2314 made non-test method non-public bug/JAL-2314 tree | commitdiff
2017-03-24 kiramtJAL-2314 Fixes to DisorderAnnotExportImport test tree | commitdiff
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues tree | commitdiff
2017-03-23 kiramtJAL-2314 Re-annotated unit tests using Jws2Discoverer tree | commitdiff
2017-03-22 gmungocJAL-2311 suppress autocalc'd annotation to isolate... tree | commitdiff
2017-03-21 kiramtJAL-2307 Fixed SiftsClient unit test tree | commitdiff
2017-03-21 gmungocJAL-2306 assert no DAS sources tree | commitdiff
2017-01-26 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI... tree | commitdiff
2017-01-09 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2016-12-16 gmungocJAL-2356 enhanced unit test to verify reuse (or not... tree | commitdiff
2016-12-15 kiramtJAL-2316 Changes following review. tree | commitdiff
2016-12-13 kiramtMerge branch 'develop' into features/JAL-2316 tree | commitdiff
2016-12-07 kiramtJAL-2316 Unit test for download client tree | commitdiff
2016-11-28 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring tree | commitdiff
2016-11-16 gmungocJAL-2319 corrected reporting of SIFTS mapping tree | commitdiff
2016-11-07 gmungocJAL-1270 renamed helper method so it is not run as... tree | commitdiff
2016-11-03 tcofoegbuJAL-2312 unit test for bug fix - repeated mapping gener... tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-24 Jim ProcterMerge branch 'releases/Release_2_10_0_Branch' tree | commitdiff
2016-10-06 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 apply license tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 format tests tree | commitdiff
2016-10-05 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties tree | commitdiff
2016-09-28 Jim ProcterJAL-2210 patch network test for additional refs tree | commitdiff
2016-09-28 Jim ProcterJAL-1270 read test props before manipulating config... tree | commitdiff
2016-09-28 Jim ProcterJAL-2232 extract EMBLCDS refs from EMBL refs on Uniprot... tree | commitdiff
2016-09-19 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-09-19 gmungocJAL-1270 use test properties file tree | commitdiff
2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB... tree | commitdiff
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser... tree | commitdiff
2016-09-13 gmungocJAL-2196 refactor PDBEntry.getProperty,setProperty... tree | commitdiff
2016-09-09 tcofoegbumerge tree | commitdiff
2016-09-08 tcofoegbuJAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property... tree | commitdiff
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum tree | commitdiff
2016-08-26 Jim ProcterJAL-2154 patch regression on DbRefFetcher due to PDB... tree | commitdiff
2016-08-22 gmungocJAL-2175 code tidying tree | commitdiff
2016-07-21 Jim ProcterMerge branch 'apifix/JAL-1926_JAL-2106' into develop tree | commitdiff
2016-07-20 Jim ProcterJAL-1926 JAL-2106 remove startRes/endRes fields - not... tree | commitdiff
2016-07-19 tcofoegbuJAL-1919 set default structure file format to mmCIF... tree | commitdiff
2016-07-18 gmungocfileFormat enum wip changes tree | commitdiff
2016-07-11 gmungocfile format enum wip changes tree | commitdiff
2016-07-09 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... features/JAL-2110_crossRefDuplications tree | commitdiff
2016-07-08 tcofoegbuJAL-1919 Fixed failing tests, enabled HETATM processing... tree | commitdiff
2016-06-30 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... tree | commitdiff
2016-06-30 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... tree | commitdiff
2016-06-30 tcofoegbuJAL-1919 updated PDBSequenceFetcherTest and JMol parser... tree | commitdiff
2016-06-29 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-06-29 tcofoegbuJAL-1479 added test case to elaborate getEntityByMostOp... tree | commitdiff
2016-06-29 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... tree | commitdiff
2016-06-29 gmungocJAL-1270 avoid overwriting .jalview_properties with... tree | commitdiff
2016-06-29 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... tree | commitdiff
2016-06-28 tcofoegbuJAL-1479 minor refactor and housekeeping tree | commitdiff
2016-06-28 tcofoegbuJAL-1479 improved SiftsClient test coverage and impleme... tree | commitdiff
2016-06-23 Jim ProcterJAL-2110 refactor sequenceFetcherTest to allow verifyin... tree | commitdiff
2016-06-22 Jim ProcterJAL-2110 remove hardwired detection of search context... tree | commitdiff
2016-06-21 Jim ProcterMerge branch 'features/JAL-2110_crossRefDuplications... tree | commitdiff
2016-06-21 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... tree | commitdiff
2016-06-21 gmungocJAL-1270 remove test artefact file after test tree | commitdiff
2016-06-21 Jim ProcterJAL-1270 ensure before/after clauses have at least... tree | commitdiff
2016-06-16 Jim Proctertests for validating start-end number/sequence length... tree | commitdiff
2016-06-14 gmungocMerge branch 'develop' into features/JAL-2110_crossRefD... tree | commitdiff
2016-06-10 tcofoegbuJAL-1479 updated SIFTS FTP download URL, added improvem... tree | commitdiff
2016-06-09 gmungocJAL-2110 work in progress tree | commitdiff
2016-06-02 gmungocMerge branch 'develop' into features/JAL-2110_makeSense... tree | commitdiff
2016-05-23 gmungocJAL-2113 EBIFetchClient refactor / unit tests / remove... tree | commitdiff
2016-05-20 gmungocJAL-2110 unit tests for and minor refactoring of CrossRef tree | commitdiff
2016-05-02 Jim ProcterJAL-1270 move some Network tests to External (require... tree | commitdiff
2016-04-26 Jim ProcterJAL-2079 update GPL header for new Xfam tests tree | commitdiff
2016-04-26 Jim ProcterJAL-2084 JAL-2079 removed RFAM(Full) from Xfam Network... tree | commitdiff
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free... tree | commitdiff
2016-04-01 gmungocJAL-1705 reworked AlignmentUtils.makeCdsAlignment and... tree | commitdiff
2016-04-01 gmungocJAL-1705 test updated for canonicalised UNIPROT sequenc... tree | commitdiff
2016-03-21 tcofoegbudevelop merge tree | commitdiff
2016-02-25 tcofoegbuJAL-1919 initial support for mmCIF using JMol API.... tree | commitdiff
2016-02-19 gmungocJAL-1705 updated for change to CrossRef signature tree | commitdiff
2016-02-12 gmungocJAL-1270 remove trailing space + test tree | commitdiff
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge tree | commitdiff
2016-01-21 gmungocJAL-1705 removed (only) usage of otherwise unused constant tree | commitdiff
2016-01-21 gmungocJAL-1705 tidy and todo comment, no functional change tree | commitdiff
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods... tree | commitdiff
2016-01-07 tcofoegbuJAL-1479 implemented timestamp based caching of SIFTS... tree | commitdiff
2015-11-16 tcofoegbuJAL-1967 JAL-1479 refactored sequence<->structure mappi... tree | commitdiff
2015-11-13 tcofoegbuJAL-1479 added transfer of residue annotation for SIFTS... tree | commitdiff
2015-11-11 tcofoegbuJAL-1957 JAL-1479 Further optimisation of SIFTs Client... features/JAL-1479_SIFTS-mapping tree | commitdiff
2015-11-05 tcofoegbuJAL-1479 SiftClient house keeping tree | commitdiff
2015-11-02 tcofoegbuJAL-1955 Uniprot sequence fetcher refactor tree | commitdiff
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