| 2005-09-14 |
amwaterhouse | Save fonts for trees
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commit | commitdiff | tree |
| 2005-09-14 |
amwaterhouse | Change fonts in Treepanel
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commit | commitdiff | tree |
| 2005-09-14 |
amwaterhouse | Add header
|
commit | commitdiff | tree |
| 2005-09-14 |
amwaterhouse | System.gc after outofmemory
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commit | commitdiff | tree |
| 2005-09-14 |
amwaterhouse | PCA is in outofmemory try-catch
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commit | commitdiff | tree |
| 2005-09-14 |
amwaterhouse | TreeFont added, binding rebuilt
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commit | commitdiff | tree |
| 2005-09-13 |
amwaterhouse | Dont respond to mouse movements if alignment wrapped
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commit | commitdiff | tree |
| 2005-09-13 |
amwaterhouse | Give focus to textarea on startup
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commit | commitdiff | tree |
| 2005-09-13 |
amwaterhouse | EPSOptions added
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commit | commitdiff | tree |
| 2005-09-13 |
amwaterhouse | Warn if out of memory
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Remove gaps in regions, not char by char
|
commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Always return true for directories
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | null pointers removed
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Null pointers removed
|
commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Dont fastpaint if movement is zero
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Update overview after change
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Update overview in alignmentChanged
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Size checking in drawGraph
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commit | commitdiff | tree |
| 2005-09-12 |
amwaterhouse | Overview subsamples alignment
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Move tree property change to treePanel
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Only 1 NJtree
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | TreePanel takes viewport
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | REmove unnecessary imports
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Init PCA in thread
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | If no consensus, disable certain colour options
|
commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | update consensus and conservation are in try catch...
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Optimise switch to fastPaint
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Correct mouse pressed bug
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Optimised for wide alignments
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Load in a thread
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Make menuitems protected
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | If vconsensus is null, return
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commit | commitdiff | tree |
| 2005-09-08 |
amwaterhouse | Add lowercase nucleotides to nucleotideHash
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commit | commitdiff | tree |
| 2005-09-02 |
amwaterhouse | Applet search by residue index fixed
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | Add header to file
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | firePropertyChange if sequences deleted
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | Need reference to mainApplet
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | Use propertyListener for alignment edits
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | Sort by added to preferences
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commit | commitdiff | tree |
| 2005-09-01 |
amwaterhouse | No need to recalculate image for font change
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commit | commitdiff | tree |
| 2005-08-31 |
amwaterhouse | Repaint scale panel after unselect all
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commit | commitdiff | tree |
| 2005-08-31 |
amwaterhouse | Must update globalColourScheme with new consensus
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | 2.05
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | UserColour gui modified
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Make 24 colours to be sure
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Validate buttons and fire on mouse press, not mouse...
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Set user colours same as global
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Repaint annotations after edit
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Wrapped, getWidth > vconsensus
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Update colours after remove left, cut, paste
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Keep mouse drag to 1 block when wrapped
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Dont setSelected on new frames
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Out of bounds checks
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Set startSeq 0 if wrap alignment
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Dont set clip if its not null
|
commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Bounds checking
|
commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | If Mac, dont use fastpaint
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commit | commitdiff | tree |
| 2005-08-30 |
amwaterhouse | Can edit in wrapped view
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Reset all colour schemes after gaps removed
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commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Include None in default colours
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Default user colour is 23 white colours
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commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Keep startRes the same after removing columns
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Reset ClustalX after removing gaps
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commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | if seq<0, return
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | load sequenceURLLinks static method
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Dont call fastPaint if Mac
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commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Edit and annotate wrapped alignment
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Edit and annotate wrapped alignment
|
commit | commitdiff | tree |
| 2005-08-29 |
amwaterhouse | Edit and annotate wrapped alignment
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | Create new image only on resize, set fontMetrics on...
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | resizeAgain flag set if user resizes whilst image is...
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | No need to call repaint after font change
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | resizeAgain flag set if user resizes whilst image is...
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | Update overviewImage if font changed
|
commit | commitdiff | tree |
| 2005-08-26 |
amwaterhouse | When saving, use print instead of println
|
commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Set new group width-1
|
commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Give extra pixel for graph values
|
commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Set threshold 0 if conservation
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commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Bring trees to front
|
commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Does edit affect any groups?
|
commit | commitdiff | tree |
| 2005-08-24 |
amwaterhouse | Dont set iframe null
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Latest version is red
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | End res of selection group corrected
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Add windowListener in constructor
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Remove ref in PaintRefresher on close, changeColour...
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commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | AddToDesktop is synchronized
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Sleep for longer
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Warning no longer red
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Dont make new frame reference in Buildwebservicemenu
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Finalize calculate method
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Finalize formats
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Regex should not be static in file loader
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Is fileChooser instanceof Basic
|
commit | commitdiff | tree |
| 2005-08-23 |
amwaterhouse | Set size and location of frame before visible
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | Check for null colour
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | Dont resize frame if bounds have been set
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | Mosue wheel moved to seqpanel
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | Use mouse wheel press to zoom
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | finalize all these hashtables
|
commit | commitdiff | tree |
| 2005-08-22 |
amwaterhouse | Checks for null colour in groups
|
commit | commitdiff | tree |
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