jalview.git
2005-09-08 amwaterhouseOptimised for wide alignments
2005-09-08 amwaterhouseLoad in a thread
2005-09-08 amwaterhouseMake menuitems protected
2005-09-08 amwaterhouseIf vconsensus is null, return
2005-09-08 amwaterhouseAdd lowercase nucleotides to nucleotideHash
2005-09-05 jprocterMore informative error messages.
2005-09-02 amwaterhouseApplet search by residue index fixed
2005-09-01 amwaterhouseAdd header to file
2005-09-01 amwaterhousefirePropertyChange if sequences deleted
2005-09-01 amwaterhouseNeed reference to mainApplet
2005-09-01 amwaterhouseUse propertyListener for alignment edits
2005-09-01 amwaterhouseSort by added to preferences
2005-09-01 amwaterhouseNo need to recalculate image for font change
2005-08-31 amwaterhouseRepaint scale panel after unselect all
2005-08-31 amwaterhouseMust update globalColourScheme with new consensus
2005-08-30 amwaterhouse2.05
2005-08-30 amwaterhouseUserColour gui modified
2005-08-30 amwaterhouseMake 24 colours to be sure
2005-08-30 amwaterhouseValidate buttons and fire on mouse press, not mouse...
2005-08-30 amwaterhouseSet user colours same as global
2005-08-30 amwaterhouseRepaint annotations after edit
2005-08-30 amwaterhouseWrapped, getWidth > vconsensus
2005-08-30 amwaterhouseUpdate colours after remove left, cut, paste
2005-08-30 amwaterhouseKeep mouse drag to 1 block when wrapped
2005-08-30 amwaterhouseDont setSelected on new frames
2005-08-30 amwaterhouseOut of bounds checks
2005-08-30 amwaterhouseSet startSeq 0 if wrap alignment
2005-08-30 amwaterhouseDont set clip if its not null
2005-08-30 amwaterhouseBounds checking
2005-08-30 amwaterhouseIf Mac, dont use fastpaint Release_2_05
2005-08-30 amwaterhouseCan edit in wrapped view
2005-08-29 amwaterhouseReset all colour schemes after gaps removed
2005-08-29 amwaterhouseInclude None in default colours
2005-08-29 amwaterhouseDefault user colour is 23 white colours
2005-08-29 amwaterhouseKeep startRes the same after removing columns
2005-08-29 amwaterhouseReset ClustalX after removing gaps
2005-08-29 amwaterhouseif seq<0, return
2005-08-29 amwaterhouseload sequenceURLLinks static method
2005-08-29 amwaterhouseDont call fastPaint if Mac
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-26 amwaterhouseCreate new image only on resize, set fontMetrics on...
2005-08-26 amwaterhouseresizeAgain flag set if user resizes whilst image is...
2005-08-26 amwaterhouseNo need to call repaint after font change
2005-08-26 amwaterhouseresizeAgain flag set if user resizes whilst image is...
2005-08-26 amwaterhouseUpdate overviewImage if font changed
2005-08-26 amwaterhouseWhen saving, use print instead of println
2005-08-25 jprocterhtml typo
2005-08-25 jproctermore informative clustal colourscheme doco.
2005-08-24 amwaterhouseSet new group width-1
2005-08-24 amwaterhouseGive extra pixel for graph values Release_2_04
2005-08-24 amwaterhouseSet threshold 0 if conservation
2005-08-24 amwaterhouseBring trees to front
2005-08-24 amwaterhouseDoes edit affect any groups?
2005-08-24 amwaterhouseDont set iframe null
2005-08-23 amwaterhouseLatest version is red
2005-08-23 amwaterhouseEnd res of selection group corrected
2005-08-23 amwaterhouseAdd windowListener in constructor
2005-08-23 amwaterhouseRemove ref in PaintRefresher on close, changeColour...
2005-08-23 amwaterhouseAddToDesktop is synchronized
2005-08-23 amwaterhouseSleep for longer
2005-08-23 amwaterhouseWarning no longer red
2005-08-23 amwaterhouseDont make new frame reference in Buildwebservicemenu
2005-08-23 amwaterhouseFinalize calculate method
2005-08-23 amwaterhouseFinalize formats
2005-08-23 amwaterhouseRegex should not be static in file loader
2005-08-23 amwaterhouseIs fileChooser instanceof Basic
2005-08-23 amwaterhouseSet size and location of frame before visible
2005-08-22 amwaterhouseCheck for null colour
2005-08-22 amwaterhouseDont resize frame if bounds have been set
2005-08-22 amwaterhouseMosue wheel moved to seqpanel
2005-08-22 amwaterhouseUse mouse wheel press to zoom
2005-08-22 amwaterhousefinalize all these hashtables
2005-08-22 amwaterhouseChecks for null colour in groups
2005-08-22 jprocterjalview-dev doesn't exist.
2005-08-22 jprocterregenerated stubs from wsdl and removed old vamsas...
2005-08-22 jprocterregenerated from wsdl.
2005-08-22 jprocterReplaced by jpred.java and associated stubs.
2005-08-22 jprocterfixed hanging on job finished bug.
2005-08-22 jproctertidied client and fixed non-unique msa bug (lead to...
2005-08-22 jprocterfixed uniquify seq[]
2005-08-22 jprocterregenerated Jpred stubs and tidied client thread.
2005-08-22 jproctercomment on WORD_SEP values
2005-08-22 amwaterhouseConservation colour scheme is no more
2005-08-19 amwaterhouseReset browser every time
2005-08-19 amwaterhouseremove property user_defined if none left
2005-08-19 amwaterhouseIf browser not set, remove property
2005-08-19 amwaterhouseSystem.out if error setting properties
2005-08-18 jproctermade changes to DEFAULT_BROWSER in user preferences...
2005-08-18 jprocterchanged first clicked to nearest the top of the alignment.
2005-08-18 jproctertypo
2005-08-18 jproctermoved to clustalw.html
2005-08-18 jproctertypo fixes.
2005-08-18 amwaterhouseAdd release history to whats new
2005-08-18 amwaterhouseAdd name and mouse listener to new user colour menuitems
2005-08-18 jproctererror checking, sanitization and properties support.
2005-08-18 amwaterhouseBlosum62 PID and conservation bug fixed
2005-08-18 jprocterGUI typo
2005-08-18 amwaterhouseReturn if UNIPROT_CACHE is null
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