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jalview.git
2005-08-30
amwaterhouse
Dont set clip if its not null
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2005-08-30
amwaterhouse
Bounds checking
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2005-08-30
amwaterhouse
If Mac, dont use fastpaint
Release_2_05
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2005-08-30
amwaterhouse
Can edit in wrapped view
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2005-08-29
amwaterhouse
Reset all colour schemes after gaps removed
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2005-08-29
amwaterhouse
Include None in default colours
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2005-08-29
amwaterhouse
Default user colour is 23 white colours
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2005-08-29
amwaterhouse
Keep startRes the same after removing columns
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2005-08-29
amwaterhouse
Reset ClustalX after removing gaps
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2005-08-29
amwaterhouse
if seq<0, return
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2005-08-29
amwaterhouse
load sequenceURLLinks static method
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2005-08-29
amwaterhouse
Dont call fastPaint if Mac
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2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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2005-08-26
amwaterhouse
Create new image only on resize, set fontMetrics on...
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2005-08-26
amwaterhouse
resizeAgain flag set if user resizes whilst image is...
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2005-08-26
amwaterhouse
No need to call repaint after font change
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2005-08-26
amwaterhouse
resizeAgain flag set if user resizes whilst image is...
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2005-08-26
amwaterhouse
Update overviewImage if font changed
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2005-08-26
amwaterhouse
When saving, use print instead of println
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2005-08-25
jprocter
html typo
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2005-08-25
jprocter
more informative clustal colourscheme doco.
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2005-08-24
amwaterhouse
Set new group width-1
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2005-08-24
amwaterhouse
Give extra pixel for graph values
Release_2_04
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2005-08-24
amwaterhouse
Set threshold 0 if conservation
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2005-08-24
amwaterhouse
Bring trees to front
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2005-08-24
amwaterhouse
Does edit affect any groups?
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2005-08-24
amwaterhouse
Dont set iframe null
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2005-08-23
amwaterhouse
Latest version is red
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2005-08-23
amwaterhouse
End res of selection group corrected
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2005-08-23
amwaterhouse
Add windowListener in constructor
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2005-08-23
amwaterhouse
Remove ref in PaintRefresher on close, changeColour...
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2005-08-23
amwaterhouse
AddToDesktop is synchronized
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2005-08-23
amwaterhouse
Sleep for longer
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2005-08-23
amwaterhouse
Warning no longer red
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2005-08-23
amwaterhouse
Dont make new frame reference in Buildwebservicemenu
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2005-08-23
amwaterhouse
Finalize calculate method
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2005-08-23
amwaterhouse
Finalize formats
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2005-08-23
amwaterhouse
Regex should not be static in file loader
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2005-08-23
amwaterhouse
Is fileChooser instanceof Basic
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2005-08-23
amwaterhouse
Set size and location of frame before visible
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2005-08-22
amwaterhouse
Check for null colour
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2005-08-22
amwaterhouse
Dont resize frame if bounds have been set
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2005-08-22
amwaterhouse
Mosue wheel moved to seqpanel
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2005-08-22
amwaterhouse
Use mouse wheel press to zoom
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2005-08-22
amwaterhouse
finalize all these hashtables
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2005-08-22
amwaterhouse
Checks for null colour in groups
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2005-08-22
jprocter
jalview-dev doesn't exist.
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2005-08-22
jprocter
regenerated stubs from wsdl and removed old vamsas...
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2005-08-22
jprocter
regenerated from wsdl.
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2005-08-22
jprocter
Replaced by jpred.java and associated stubs.
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2005-08-22
jprocter
fixed hanging on job finished bug.
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2005-08-22
jprocter
tidied client and fixed non-unique msa bug (lead to...
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2005-08-22
jprocter
fixed uniquify seq[]
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2005-08-22
jprocter
regenerated Jpred stubs and tidied client thread.
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2005-08-22
jprocter
comment on WORD_SEP values
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2005-08-22
amwaterhouse
Conservation colour scheme is no more
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2005-08-19
amwaterhouse
Reset browser every time
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2005-08-19
amwaterhouse
remove property user_defined if none left
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2005-08-19
amwaterhouse
If browser not set, remove property
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2005-08-19
amwaterhouse
System.out if error setting properties
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2005-08-18
jprocter
made changes to DEFAULT_BROWSER in user preferences...
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2005-08-18
jprocter
changed first clicked to nearest the top of the alignment.
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2005-08-18
jprocter
typo
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2005-08-18
jprocter
moved to clustalw.html
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2005-08-18
jprocter
typo fixes.
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2005-08-18
amwaterhouse
Add release history to whats new
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2005-08-18
amwaterhouse
Add name and mouse listener to new user colour menuitems
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2005-08-18
jprocter
error checking, sanitization and properties support.
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2005-08-18
amwaterhouse
Blosum62 PID and conservation bug fixed
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2005-08-18
jprocter
GUI typo
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2005-08-18
amwaterhouse
Return if UNIPROT_CACHE is null
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2005-08-18
amwaterhouse
Add idwidth.gif in applet jar
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2005-08-18
amwaterhouse
Character methods don't exist in java 1.1
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2005-08-18
jprocter
typo - Muscle->JNet
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2005-08-18
jprocter
Jpred to JNet
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2005-08-18
amwaterhouse
2_03 build project
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2005-08-18
amwaterhouse
Proceed with upperCase residue
Release_2_03
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2005-08-18
jprocter
various case sensitivity bugs fixed in residue comparis...
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2005-08-18
amwaterhouse
Use aa index for aboveThreshold as well as colour index
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2005-08-17
jprocter
Client threads for discovered web services.
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2005-08-17
jprocter
GUI modifications for service discovery.
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2005-08-17
jprocter
Gui Modifications for Service Discovery.
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2005-08-17
jprocter
<No Comment Entered>
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2005-08-17
amwaterhouse
Has version, Groups are optional, trees added to schema
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2005-08-17
amwaterhouse
Add attribute schemeName
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2005-08-17
amwaterhouse
Add buildPropertiesFile to applet jar
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2005-08-17
amwaterhouse
Read in version from build details file in applet jar
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2005-08-17
amwaterhouse
Web Services moved from Calculate
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2005-08-17
amwaterhouse
Capitalise menus
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2005-08-17
jprocter
Maintain list of webservices and query any Service...
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2005-08-17
jprocter
Simple Registry Service stubs
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2005-08-17
jprocter
Fixed basic name to sequence ID matching (bug dragonfly...
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2005-08-17
amwaterhouse
No basicDirectoryModel on the Mac
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2005-08-17
amwaterhouse
Set size for mac users
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2005-08-17
amwaterhouse
Error reply is kept separate from file type
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2005-08-17
amwaterhouse
Add names to schemes
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2005-08-17
amwaterhouse
New image
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2005-08-17
amwaterhouse
Check default colour is not null
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