2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | JAL-2385 update slider settings when switching slider... |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | JAL-2383 fixup from last merge |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | JAL-2383 check for null, spelling |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | JAL-2383 make popup colour menu order and wording consi... |
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2017-01-20 |
gmungoc | JAL-2383 restore group conservation slider setting... |
commit | commitdiff | tree | snapshot |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
commit | commitdiff | tree | snapshot |
2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
commit | commitdiff | tree | snapshot |
2017-01-19 |
gmungoc | JAL-2370 unit tests for extracted ColumnSelection.stret... |
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2017-01-19 |
gmungoc | JAL-2370 corrected applet mouse drag, refactored into... |
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2017-01-18 |
gmungoc | JAL-2379 more realistic matrices for unit tests |
commit | commitdiff | tree | snapshot |
2017-01-17 |
gmungoc | JAL-1933 update threshold on focus lost in text field features/JAL-2295setChimeraAttributes |
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2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2295setChimera... |
commit | commitdiff | tree | snapshot |
2017-01-17 |
gmungoc | JAL-2370 fix bug when hiding a range including two... |
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2017-01-17 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
commit | commitdiff | tree | snapshot |
2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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2017-01-17 |
gmungoc | JAL-2379 use SparseMatrix for encoded sequences, tidy... |
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2017-01-17 |
gmungoc | JAL-2379 SparseMatrix alternative to Matrix, both MatrixI |
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2017-01-17 |
gmungoc | JAL-2379 SparseDoubleArray added (for use by SparseMatrix) |
commit | commitdiff | tree | snapshot |
2017-01-16 |
gmungoc | JAL-1270 class renamed |
commit | commitdiff | tree | snapshot |
2017-01-16 |
gmungoc | JAL-2380 fix Matrix.postMultiply() |
commit | commitdiff | tree | snapshot |
2017-01-16 |
gmungoc | JAL-1270 tweaks to AlignmentGenerator / client class |
commit | commitdiff | tree | snapshot |
2017-01-12 |
gmungoc | JAL-1270 renamed AlignmentGenerator, and added peptide... |
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2017-01-12 |
gmungoc | JAL-2379 null references to PCA model when panel is... |
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2017-01-12 |
gmungoc | JAL-2344 now flagging formats as 'identifiable' instead... |
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2017-01-11 |
gmungoc | JAL-2344 separated AlignmentFileI into AlignmentFileRea... |
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2017-01-11 |
gmungoc | JAL-2344 groovy script that registers a new file format |
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2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
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2017-01-11 |
gmungoc | JAL-2344 addSequence() method added to support Groovy... |
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2017-01-11 |
kiramt | JAL-2316 Spanish message translations |
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2017-01-10 |
gmungoc | JAL-2377 avoid infinite loop formatting 1.0E-310 |
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2017-01-10 |
kiramt | JAL-2316 Separate label/db name in UrlProviders. Unit... |
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2017-01-09 |
kiramt | JAL-2316 Prevent applet from loading null links into... |
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2017-01-09 |
gmungoc | JAL-2371 pull up isNucleotide to SequenceCollectionI |
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2017-01-09 |
gmungoc | JAL-2371 remove ColourSchemeI.findColour(c), pure inter... |
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2017-01-09 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
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2017-01-06 |
gmungoc | JAL-2371 slight simplification of findColour overrides |
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2017-01-06 |
gmungoc | JAL-2371 correct Clustal, Blosum, PID colouring of... |
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2017-01-06 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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2017-01-06 |
gmungoc | JAL-2360 findColour() with no args removed from ColourS... |
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2017-01-06 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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2017-01-06 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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2017-01-05 |
gmungoc | JAL-2374 unit test for (modified) Alignment.findGroup() |
commit | commitdiff | tree | snapshot |
2017-01-05 |
gmungoc | JAL-2374 fix popup out by one and multiple groups bugs |
commit | commitdiff | tree | snapshot |
2017-01-05 |
gmungoc | JAL-2371 add test for toggling ignore gaps with PID... |
commit | commitdiff | tree | snapshot |
2017-01-05 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
commit | commitdiff | tree | snapshot |
2017-01-05 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
commit | commitdiff | tree | snapshot |
2017-01-05 |
gmungoc | JAL-2373 set state of Above PID, By Conservation in... |
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2017-01-05 |
gmungoc | JAL-2371 tests added |
commit | commitdiff | tree | snapshot |
2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
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2016-12-29 |
gmungoc | JAL-2630 first pass groovy colour scheme (with slight... |
commit | commitdiff | tree | snapshot |
2016-12-23 |
gmungoc | JAL-2360 removed UserDefinedColours.userColourSchemes |
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2016-12-23 |
gmungoc | JAL-2120 JAL-2360 remove obsolete PDBViewer |
commit | commitdiff | tree | snapshot |
2016-12-22 |
gmungoc | JAL-2360 fix bug that prematurely created a SequenceGroup |
commit | commitdiff | tree | snapshot |
2016-12-22 |
gmungoc | JAL-2360 structure viewers now using ColourMenuHelper... |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 set new/loaded colour scheme name correctly |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 simplified code to create a new colour scheme |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 added a table to show score colours |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 comment only |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 tidy up, simplify isApplicableTo test |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 no RNAHelices colouring for groups |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2361 Blosum is enabled for peptide |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-1421 add types to Map |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 fix incorrect action on Cancel user defined... |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 tidy spelling and file contents order only |
commit | commitdiff | tree | snapshot |
2016-12-21 |
gmungoc | JAL-2360 Javadoc and test cases for findAnnotation |
commit | commitdiff | tree | snapshot |
2016-12-20 |
gmungoc | JAL-2360 testRegisterColourScheme to demonstrate a... |
commit | commitdiff | tree | snapshot |
2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
commit | commitdiff | tree | snapshot |
2016-12-19 |
gmungoc | JAL-2360 amended toAppletParameter() for reproducible... |
commit | commitdiff | tree | snapshot |
2016-12-19 |
gmungoc | JAL-2361 select colour menu item by matching its name... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
kiramt | JAL-2316 Added database name column to URL links table... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-2356 enhanced unit test to verify reuse (or not... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-2346 ensure view updates when annotation options... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
Jim Procter | JAL-2360 report line number when threshold cannot be... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-2360 added UserColourScheme.toAppletParameter+test... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-2360 getColour() renamed to getColourScheme(),... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-1705 JAL-98 use SortedMap as more accurate type... |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
commit | commitdiff | tree | snapshot |
2016-12-16 |
gmungoc | JAL-1354 use i18n text for expected value |
commit | commitdiff | tree | snapshot |
2016-12-15 |
kiramt | JAL-2316 Changes following review. |
commit | commitdiff | tree | snapshot |
2016-12-14 |
gmungoc | JAL-2360 test added |
commit | commitdiff | tree | snapshot |
2016-12-14 |
gmungoc | JAL-2360 added check for null annotations array |
commit | commitdiff | tree | snapshot |
2016-12-14 |
gmungoc | JAL-1544 JAL-2360 reformatted help page a bit nicer... |
commit | commitdiff | tree | snapshot |
2016-12-14 |
Jim Procter | Merge branch 'patch/JAL-2197_jpredforjnets' into develop |
commit | commitdiff | tree | snapshot |
2016-12-13 |
kiramt | Merge branch 'develop' into features/JAL-2316 |
commit | commitdiff | tree | snapshot |
2016-12-13 |
gmungoc | JAL-2365 test for lightgray, darkgray not lightGray... |
commit | commitdiff | tree | snapshot |
2016-12-13 |
gmungoc | JAL-2360 code formatting only and if-else changed to... |
commit | commitdiff | tree | snapshot |
2016-12-13 |
gmungoc | JAL-2361 adding items to applet colour menus, TCoffee... |
commit | commitdiff | tree | snapshot |
2016-12-13 |
kiramt | JAL-2316 Documentation update |
commit | commitdiff | tree | snapshot |
2016-12-12 |
gmungoc | JAL-2361 extract methods to (re-)build colour menu |
commit | commitdiff | tree | snapshot |
2016-12-12 |
gmungoc | JAL-2360 simplify nucleotide flag, remove setter |
commit | commitdiff | tree | snapshot |
2016-12-12 |
gmungoc | JAL-2361 use consistent colour names on menus |
commit | commitdiff | tree | snapshot |
2016-12-12 |
gmungoc | JAL-1544 backgroud -> background |
commit | commitdiff | tree | snapshot |
2016-12-12 |
kiramt | JAL-2316 Added GUI checks for duplicate link ids |
commit | commitdiff | tree | snapshot |
2016-12-12 |
kiramt | JAL-2316 Unit test update to UrlLinkTableModel and... |
commit | commitdiff | tree | snapshot |
2016-12-12 |
kiramt | JAL-2316 Added jalview.urls.* packages |
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next |