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jalview.git
2017-05-29 Jim ProcterMerge branch 'features/JAL-2465_No-mapping_Jmol-structu... commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2533 update javadoc features/JAL-2465_No-mapping_Jmol-structures-loaded-via-url commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2465 fixed groups for JmolViewerTest.testStructureL... commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2536' into develop commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2536 tweak javadoc wording commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2517 release notes commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2517cancelAppletColour' into... commit | commitdiff | tree | snapshot
2017-05-29 Jim Procterrelease notes commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2418 updated JABAWS server in what’s new commit | commitdiff | tree | snapshot
2017-05-29 Jim ProcterJAL-2491 JAL-2526 JAL-2566 JAL-2563 JAL-2547 release... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterMerge branch 'bug/JAL-2491' into develop commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterMerge branch 'bug/JAL-2547tooltipOnGap' into develop commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterMerge branch 'task/JAL-2562_SequenceI.findPosition... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterJAL-2563 failing test to verify SetStatus returns posit... task/JAL-2562_SequenceI.findPosition commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterJAL-2563 test to verify SetStatus returns -1 so mouseOv... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterMerge branch 'task/JAL-2562_SequenceI.findPosition... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterJAL-2547 JAL-2562 rejig SetStatusMessage return value... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterMerge branch 'task/JAL-2562_SequenceI.findPosition... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterJAL-2526 test and documentation for SeqPanel.setStatus... commit | commitdiff | tree | snapshot
2017-05-27 Jim ProcterJAL-2562 javadoc TODO commit | commitdiff | tree | snapshot
2017-05-26 kiramtJAL-2491 Missed port to applet from JAL-1691 bug/JAL-2491 commit | commitdiff | tree | snapshot
2017-05-26 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... commit | commitdiff | tree | snapshot
2017-05-26 Jim ProcterJAL-2418 updated JPred documentation and screenshot... commit | commitdiff | tree | snapshot
2017-05-26 Jim ProcterJAL-2418 JAL-2549 JABAWS 2.2 release notes commit | commitdiff | tree | snapshot
2017-05-26 Jim ProcterMerge branch 'features/JAL-2549_updateJABAWSto220'... commit | commitdiff | tree | snapshot
2017-05-26 tcofoegbuJAL-2465 Improvement to re-instate storing recently... commit | commitdiff | tree | snapshot
2017-05-26 tcofoegbuJAL-2465 fix to prevent files loaded from the system... commit | commitdiff | tree | snapshot
2017-05-23 Jim ProcterJAL-2549 RNAAliFold result to annotation file roundtrip... features/JAL-2549_updateJABAWSto220 commit | commitdiff | tree | snapshot
2017-05-23 Jim ProcterJAL-2549 skip ‘Unrecognised Service’ which resolves... commit | commitdiff | tree | snapshot
2017-05-23 Jim ProcterJAL-2549 replace JABAWS 2.1 with 2.2 client and remove... commit | commitdiff | tree | snapshot
2017-05-23 gmungocJAL-2547 don't show features in tooltip over a gap bug/JAL-2547tooltipOnGap commit | commitdiff | tree | snapshot
2017-05-22 gmungocJAL-2504 update the right feature colour when creating... bug/JAL-2510amendFeatures commit | commitdiff | tree | snapshot
2017-05-22 gmungocJAL-2544 unit tests for sort by feature score commit | commitdiff | tree | snapshot
2017-05-22 gmungocJAL-2544 check feature overlaps selection region commit | commitdiff | tree | snapshot
2017-05-22 kiramtMerge remote-tracking branch 'origin/bug/JAL-2256'... commit | commitdiff | tree | snapshot
2017-05-22 Jim ProcterJAL-2418 patch build - broken htsjdk import commit | commitdiff | tree | snapshot
2017-05-19 gmungocJAL-2526 removed redundant call to Sequence.findPosition() commit | commitdiff | tree | snapshot
2017-05-18 Jim ProcterMerge branch 'bug/JAL-2388_typeCheckAlignView.getUpdate... commit | commitdiff | tree | snapshot
2017-05-18 Jim ProcterJAL-2388 return empty hidden columns for fully visible... commit | commitdiff | tree | snapshot
2017-05-18 kiramtJAL-2256 Corrected AllCols/Rows iterator behaviour... bug/JAL-2256 commit | commitdiff | tree | snapshot
2017-05-18 Jim ProcterJAL-2418 remove explicit test suite stats commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterMerge branch 'develop' into documentation/JAL-2418_rele... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterMerge branch 'bug/JAL-2510amendFeatures' into develop commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterJAL-2447 add links to issues.jalview.org for experiment... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterJAL-2447 experimental section in ‘Whats New’ commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterJAL-2447 JAL-2295 JAL-2296 documenting as experimental... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterMerge branch 'develop' into documentation/JAL-2418_rele... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterMerge branch 'features/JAL-2447experimentalFlag' into... commit | commitdiff | tree | snapshot
2017-05-17 Jim ProcterJAL-2418 release notes commit | commitdiff | tree | snapshot
2017-05-17 gmungocJAL-2504 use (and update) defaults for new feature... commit | commitdiff | tree | snapshot
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-2418 release notes commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-384 documentation on custom colours groovy examples commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-384 - groovy scripts for conserved/unconserved... commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-2418 release notes commit | commitdiff | tree | snapshot
2017-05-16 kiramtJAL-2536 Overview window sizing not subject to min... bug/JAL-2536 commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-2418 JAL-2316 added to new features commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-2316 tweaking docs and links in help commit | commitdiff | tree | snapshot
2017-05-16 gmungocJAL-2517 restore complex colour scheme on Cancel in... bug/JAL-2517cancelAppletColour commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterJAL-2418 release 2.10.2 release notes template commit | commitdiff | tree | snapshot
2017-05-16 Jim Procteralternative patch for JAL-2339 readability in java... commit | commitdiff | tree | snapshot
2017-05-16 gmungocJAL-2403 simplify instantiation / configuration of... commit | commitdiff | tree | snapshot
2017-05-16 kiramtJAL-2522 Missed fix to applet commit | commitdiff | tree | snapshot
2017-05-16 kiramtJAL-2388 Rationalised hashCode method in HiddenColumns commit | commitdiff | tree | snapshot
2017-05-16 kiramtMerge branch 'develop' into bug/JAL-2491 commit | commitdiff | tree | snapshot
2017-05-16 kiramtJAL-2491 Better merge commit | commitdiff | tree | snapshot
2017-05-16 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2507 fix test: knockon from capitalisation on secon... bug/JAL-2507_rnasecstrstockholm commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2311 disable and relocate Jared service tests to... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2507 capitalisation for annotation lines generated... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2507 case insensitive recognition of annotation... commit | commitdiff | tree | snapshot
2017-05-15 gmungocJAL-2532 new feature types and colour changes from... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2507 - required callers to specify exact ignore... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2535 quick hack to implement posterior probabilitie... commit | commitdiff | tree | snapshot
2017-05-15 tcofoegbuJAL-2520 improvement to use URL leaf name for creating... commit | commitdiff | tree | snapshot
2017-05-15 tcofoegbuJAL-2533 improvement to prune off file extension when... commit | commitdiff | tree | snapshot
2017-05-15 kiramtMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-05-15 kiramtJAL-2388 Add missed optimisation commit | commitdiff | tree | snapshot
2017-05-15 kiramtJAL-2491 Better merge but not quite right yet commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterMerge branch 'features/JAL-2376_add-horizontal-bar... commit | commitdiff | tree | snapshot
2017-05-15 Jim ProcterJAL-2371 create a default ResidueShader when constructi... commit | commitdiff | tree | snapshot
2017-05-15 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-05-15 kiramtJAL-2491 Tests commit | commitdiff | tree | snapshot
2017-05-15 kiramtJAL-2491 Tidies commit | commitdiff | tree | snapshot
2017-05-12 kiramtJAL-2491 Tidy commit | commitdiff | tree | snapshot
2017-05-12 kiramtJAL-2491 Tidies to Overview panel calls in light of... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2418 broken help ref commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2435 documentation and what’s new commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2435 mention new checkbox in linked cDNA/Protein... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2435 mirror antiAlias setting between cDNA and... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2388 mention overview popup in documentation commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2388 checkbox in overview popup for applet commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterMerge branch 'features/JAL-2228_efficient_featurecounts... commit | commitdiff | tree | snapshot
2017-05-12 Jim ProcterJAL-2228 updated script in help docs, renamed docs... commit | commitdiff | tree | snapshot
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