jalview.git
2015-07-10 gmungocJAL-1807 explicit imports (jalview.schemes)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.renderer)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.jbgui)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.javascript)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.io.*)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.gui)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.ext.*)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.datamodel)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.controller)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.commands)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.bin)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.appletgui)
2015-07-10 gmungocJAL-1807 explicit imports (jalview.analysis)
2015-07-08 gmungocJAL-1807 merge from JAL-1759jmolUpdate
2015-07-08 gmungocJAL-1807 disambiguated method signatures with numeric...
2015-07-08 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-07-08 gmungocJAL-1598 replaced faulty regex, amended Varna call...
2015-07-08 tcofoegbuJAL-1641 biojson documentation with docson
2015-07-07 tcofoegbuJAL-1769 fixed output to jalview (.jpv) file in headles...
2015-07-07 tcofoegbuJAL-1805 test envirionment separation
2015-07-06 tcofoegbuMerge branch 'features/1769_headless-mode-test' into...
2015-07-06 tcofoegbuJAL-1641 added json schema for jalview JSON model,...
2015-07-06 tcofoegbuJAL-1769 fixed headless execution mode and created...
2015-07-06 gmungocJAL-1081 unit tests added
2015-07-06 gmungocJAL-1782 refactored test to ensure it passes in TestNG
2015-07-06 gmungocJAL-1421 generics used for leaner safer code
2015-07-06 gmungocJAL-1799 tweaked calculation for applet, now showing...
2015-07-06 gmungocJAL-1799 equivalent logic in applet
2015-07-03 gmungocJAL-892 jnlp, installAnywhere, build, licence reference... features/JAL-892varnaToProject
2015-07-03 gmungocMerge branch 'develop' into features/JAL-892varnaToProject
2015-07-03 gmungocJAL-892 1 second delay for correct initial rendering...
2015-07-02 tcofoegbuMerge branch 'bug/JAL-1443_loading-empty-file' into...
2015-07-02 tcofoegbuJAL-1443 data validation for empty content before loadi...
2015-07-02 gmungocJAL-1677 check all response lines when parsing REST...
2015-07-01 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-07-01 gmungocJAL-1681 more condensed tooltip where codons share...
2015-07-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2015-07-01 tcofoegbuhouse keeping
2015-07-01 gmungocJAL-1802 explanatory comment added
2015-07-01 gmungocJAL-1802 handle slide sequences edits in split frame...
2015-07-01 gmungocJAL-1799 deduct more space for decorators on Windows
2015-07-01 gmungocJAL-1619 align the added sequences to match what they...
2015-06-30 tcofoegbuMerge branch 'features/JAL-1641_JSON-tests-and-docs...
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even...
2015-06-29 gmungocJAL-1799 adjusted annotation height calculation
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor
2015-06-26 gmungocJAL-1782 BeforeMethod added to fix test in NG
2015-06-26 gmungocMerge branch 'develop' into features/JAL-892varnaToProject
2015-06-26 tcofoegbumerge
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog...
2015-06-25 Jim ProcterJAL-1691 avoid NPE when original split frame has been...
2015-06-25 Jim ProcterJAL-1780 JAL-653 JAL-1892 brackets in wrong place broke...
2015-06-24 Jim ProcterMerge branch 'features/JAL-1370_patchshowunconserved...
2015-06-24 Jim ProcterJAL-1790 fix: javac.source=1.7 and javac.target=1.7...
2015-06-24 Jim ProcterJAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation
2015-06-24 Jim ProcterMerge branch 'merge/develop_JAL-1780_JAL-653_JAL-1892...
2015-06-23 Jim ProcterJAL-1780 JAL-653 jim forgot to put the conditional... merge/develop_JAL-1780_JAL-653_JAL-1892
2015-06-23 Jim ProcterJAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
2015-06-22 Jim ProcterJAL-1270 fix logic in stockholm test allowing annotatio...
2015-06-22 Jim ProcterJAL-653 JAL-1780 JAL-1140 added RNAML example alignment...
2015-06-22 Jim ProcterJAL-653 JAL-1780 dropped unnecessary refs
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports
2015-06-22 gmungocJAL-892 tidy Varna panel names; JAL-1789 simplified...
2015-06-22 gmungocJAL-893 upgrade to VARNAv3-93.jar
2015-06-19 Jim ProcterJAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfil...
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports
2015-06-19 gmungocJAL-892 check viewer is linked to alignment panel on...
2015-06-19 Jim ProcterJAL-653 JAL-1780 minimise call rate now av.hasHiddenRow...
2015-06-19 Jim ProcterJAL-653 JAL-1780 dropped av.setHasHiddenRows() and...
2015-06-19 tcofoegbuJAL-1270 test suits import order refactor features/JAL-1270_JUnit-to-TestNG features/JAL-1782_JUnit-to-TestNG
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring
2015-06-18 Jim ProcterJAL-653 patch broken test code - test still not passing
2015-06-18 Jim ProcterJAL-653 JAL-1780 JAL-1543 javadoc and comment about...
2015-06-18 Jim ProcterJAL-653 JAL-1780 javadoc for FeatureRenderer prior...
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference...
2015-06-18 gmungocJAL-1270 test added
2015-06-18 gmungocJAL-1544 typos in comments
2015-06-18 gmungocJAL-892 JAL-1779 save/restore Varna viewer to/from...
2015-06-18 gmungocJAL-1695 default ENABLE_SPLIT_FRAME to true for desktop
2015-06-18 gmungocJAL-892 schema changes (rnaViewer) for save Varna to...
2015-06-18 gmungocJAL-1781 annotation.sequenceRef now sequence id not... features/JAL-1781annotationXmlIds
2015-06-17 Jim ProcterJAL-1784 minimise data duplication, and report out...
2015-06-17 Jim ProcterJAL-1784 refactor parse method to directly parse FilePa...
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into...
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export...
2015-06-17 Jim ProcterJAL-1783 add java 1.7 and 1.8 class numbers
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-1780_export...
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile
2015-06-17 tcofoegbuJAL-1780 Export settings for flatfile output
2015-06-17 gmungocJAL-1588 restore ChimeraViewFrame geometry as well
2015-06-17 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-06-17 gmungocJAL-1778 reinstated this.ssm to handle 'close all windo...
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
2015-06-15 Jim ProcterJAL-1665 patch for regression: failing jalview.ws.jabaw...
2015-06-15 Jim ProcterJAL-1775 patch for regression from Anne Menard’s pseudo...
2015-06-15 Jim ProcterMerge branch 'bug/JAL-1775' into develop
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