jalview.git
2005-09-14 amwaterhouseSave fonts for trees
2005-09-14 amwaterhouseChange fonts in Treepanel
2005-09-14 amwaterhouseAdd header
2005-09-14 amwaterhouseSystem.gc after outofmemory
2005-09-14 amwaterhousePCA is in outofmemory try-catch
2005-09-14 amwaterhouseTreeFont added, binding rebuilt
2005-09-13 amwaterhouseDont respond to mouse movements if alignment wrapped
2005-09-13 amwaterhouseGive focus to textarea on startup
2005-09-13 amwaterhouseEPSOptions added
2005-09-13 amwaterhouseWarn if out of memory
2005-09-12 amwaterhouseRemove gaps in regions, not char by char
2005-09-12 amwaterhouseAlways return true for directories
2005-09-12 amwaterhousenull pointers removed
2005-09-12 amwaterhouseNull pointers removed
2005-09-12 amwaterhouseDont fastpaint if movement is zero
2005-09-12 amwaterhouseUpdate overview after change
2005-09-12 amwaterhouseUpdate overview in alignmentChanged
2005-09-12 amwaterhouseSize checking in drawGraph
2005-09-12 amwaterhouseOverview subsamples alignment
2005-09-08 amwaterhouseMove tree property change to treePanel
2005-09-08 amwaterhouseOnly 1 NJtree
2005-09-08 amwaterhouseTreePanel takes viewport
2005-09-08 amwaterhouseREmove unnecessary imports
2005-09-08 amwaterhouseInit PCA in thread
2005-09-08 amwaterhouseIf no consensus, disable certain colour options
2005-09-08 amwaterhouseupdate consensus and conservation are in try catch...
2005-09-08 amwaterhouseOptimise switch to fastPaint
2005-09-08 amwaterhouseCorrect mouse pressed bug
2005-09-08 amwaterhouseOptimised for wide alignments
2005-09-08 amwaterhouseLoad in a thread
2005-09-08 amwaterhouseMake menuitems protected
2005-09-08 amwaterhouseIf vconsensus is null, return
2005-09-08 amwaterhouseAdd lowercase nucleotides to nucleotideHash
2005-09-05 jprocterMore informative error messages.
2005-09-02 amwaterhouseApplet search by residue index fixed
2005-09-01 amwaterhouseAdd header to file
2005-09-01 amwaterhousefirePropertyChange if sequences deleted
2005-09-01 amwaterhouseNeed reference to mainApplet
2005-09-01 amwaterhouseUse propertyListener for alignment edits
2005-09-01 amwaterhouseSort by added to preferences
2005-09-01 amwaterhouseNo need to recalculate image for font change
2005-08-31 amwaterhouseRepaint scale panel after unselect all
2005-08-31 amwaterhouseMust update globalColourScheme with new consensus
2005-08-30 amwaterhouse2.05
2005-08-30 amwaterhouseUserColour gui modified
2005-08-30 amwaterhouseMake 24 colours to be sure
2005-08-30 amwaterhouseValidate buttons and fire on mouse press, not mouse...
2005-08-30 amwaterhouseSet user colours same as global
2005-08-30 amwaterhouseRepaint annotations after edit
2005-08-30 amwaterhouseWrapped, getWidth > vconsensus
2005-08-30 amwaterhouseUpdate colours after remove left, cut, paste
2005-08-30 amwaterhouseKeep mouse drag to 1 block when wrapped
2005-08-30 amwaterhouseDont setSelected on new frames
2005-08-30 amwaterhouseOut of bounds checks
2005-08-30 amwaterhouseSet startSeq 0 if wrap alignment
2005-08-30 amwaterhouseDont set clip if its not null
2005-08-30 amwaterhouseBounds checking
2005-08-30 amwaterhouseIf Mac, dont use fastpaint Release_2_05
2005-08-30 amwaterhouseCan edit in wrapped view
2005-08-29 amwaterhouseReset all colour schemes after gaps removed
2005-08-29 amwaterhouseInclude None in default colours
2005-08-29 amwaterhouseDefault user colour is 23 white colours
2005-08-29 amwaterhouseKeep startRes the same after removing columns
2005-08-29 amwaterhouseReset ClustalX after removing gaps
2005-08-29 amwaterhouseif seq<0, return
2005-08-29 amwaterhouseload sequenceURLLinks static method
2005-08-29 amwaterhouseDont call fastPaint if Mac
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-26 amwaterhouseCreate new image only on resize, set fontMetrics on...
2005-08-26 amwaterhouseresizeAgain flag set if user resizes whilst image is...
2005-08-26 amwaterhouseNo need to call repaint after font change
2005-08-26 amwaterhouseresizeAgain flag set if user resizes whilst image is...
2005-08-26 amwaterhouseUpdate overviewImage if font changed
2005-08-26 amwaterhouseWhen saving, use print instead of println
2005-08-25 jprocterhtml typo
2005-08-25 jproctermore informative clustal colourscheme doco.
2005-08-24 amwaterhouseSet new group width-1
2005-08-24 amwaterhouseGive extra pixel for graph values Release_2_04
2005-08-24 amwaterhouseSet threshold 0 if conservation
2005-08-24 amwaterhouseBring trees to front
2005-08-24 amwaterhouseDoes edit affect any groups?
2005-08-24 amwaterhouseDont set iframe null
2005-08-23 amwaterhouseLatest version is red
2005-08-23 amwaterhouseEnd res of selection group corrected
2005-08-23 amwaterhouseAdd windowListener in constructor
2005-08-23 amwaterhouseRemove ref in PaintRefresher on close, changeColour...
2005-08-23 amwaterhouseAddToDesktop is synchronized
2005-08-23 amwaterhouseSleep for longer
2005-08-23 amwaterhouseWarning no longer red
2005-08-23 amwaterhouseDont make new frame reference in Buildwebservicemenu
2005-08-23 amwaterhouseFinalize calculate method
2005-08-23 amwaterhouseFinalize formats
2005-08-23 amwaterhouseRegex should not be static in file loader
2005-08-23 amwaterhouseIs fileChooser instanceof Basic
2005-08-23 amwaterhouseSet size and location of frame before visible
2005-08-22 amwaterhouseCheck for null colour
2005-08-22 amwaterhouseDont resize frame if bounds have been set
2005-08-22 amwaterhouseMosue wheel moved to seqpanel
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