vamsas 0.2 client capabilities

diff --git a/help/html/features/clarguments.html b/help/html/features/clarguments.html
index aebd7fe..e571b12 100644 (file)
--- a/help/html/features/clarguments.html
+++ b/help/html/features/clarguments.html
@@ -63,6 +63,12 @@
                <div align="left">Turn off google analytics usage tracking</div>
                </td>
        </tr>
+       <tr><td>
+       <div align="center">-[no]sortbytree</div>
+               <td>
+               <div align="left">Enable or disable automatic sorting of associated view when a new tree is displayed</div>
+               </td>
+       </tr>
        <tr>
                <td>
                <div align="center">-dasserver nickname=URL</div>
@@ -91,6 +97,28 @@
                </td>
        </tr>
        <tr>
+       <td>
+               <div align="center">-vdoc VAMSAS DOCUMENT FILE or URL</div>
+               <td>
+               <div align="left">Import the given vamsas document into a new session.<br><em>New in 2.5</em></div>
+               </td>
+       </tr>
+       <tr>
+               <td>
+               <div align="center">-vsess VAMSAS SESSION URL</div>
+               <td>
+               <div align="left">Join the given vamsas session<br>If a document was also specified, this will be imported first and then committed as new data from Jalview to the specified session (Experimental - not yet enabled!).<em>New in 2.5</em></div></div>
+               </td>
+       </tr>
+       <tr>
+               <td>
+               <div align="center">-groovy FILE</div>
+               <td>
+               <div align="left">Execute groovy script in FILE (where FILE may be 'STDIN' to read from the standard input) after all other
+               arguments have been processed</div>
+               </td>
+       </tr>
+       <tr>
                <td>
                <div align="center">-fasta FILE</div>
                </td>