JvOptionPane.setInteractiveMode(false);
JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
}
+
@Test(groups = "Functional")
public void testSetStatusReturnsNearestResiduePosition()
{
AlignmentI visAl = alignFrame.getViewport().getAlignment();
// Test either side of gap
- assertEquals(
- alignFrame.alignPanel.getSeqPanel().setStatusMessage(
- visAl.getSequenceAt(1), 1, 1), 2);
+ assertEquals(alignFrame.alignPanel.getSeqPanel()
+ .setStatusMessage(visAl.getSequenceAt(1), 1, 1), 2);
assertEquals(((JLabel) PA.getValue(alignFrame, "statusBar")).getText(),
"Sequence 2 ID: Seq2 Residue: ALA (2)");
- assertEquals(
- alignFrame.alignPanel.getSeqPanel().setStatusMessage(
- visAl.getSequenceAt(1), 4, 1), 3);
+ assertEquals(alignFrame.alignPanel.getSeqPanel()
+ .setStatusMessage(visAl.getSequenceAt(1), 4, 1), 3);
assertEquals(((JLabel) PA.getValue(alignFrame, "statusBar")).getText(),
"Sequence 2 ID: Seq2 Residue: GLU (3)");
// no status message at a gap, returns next residue position to the right
- assertEquals(
- alignFrame.alignPanel.getSeqPanel().setStatusMessage(
- visAl.getSequenceAt(1), 2, 1), 3);
+ assertEquals(alignFrame.alignPanel.getSeqPanel()
+ .setStatusMessage(visAl.getSequenceAt(1), 2, 1), 3);
assertEquals(((JLabel) PA.getValue(alignFrame, "statusBar")).getText(),
"Sequence 2 ID: Seq2");
- assertEquals(
- alignFrame.alignPanel.getSeqPanel().setStatusMessage(
- visAl.getSequenceAt(1), 3, 1), 3);
+ assertEquals(alignFrame.alignPanel.getSeqPanel()
+ .setStatusMessage(visAl.getSequenceAt(1), 3, 1), 3);
assertEquals(((JLabel) PA.getValue(alignFrame, "statusBar")).getText(),
"Sequence 2 ID: Seq2");
}
al.getHeight());
AlignmentI visAl = alignFrame.getViewport().getAlignment();
- assertEquals(
- alignFrame.alignPanel.getSeqPanel().setStatusMessage(
- visAl.getSequenceAt(1), 1, 1), 2);
+ assertEquals(alignFrame.alignPanel.getSeqPanel()
+ .setStatusMessage(visAl.getSequenceAt(1), 1, 1), 2);
assertEquals(((JLabel) PA.getValue(alignFrame, "statusBar")).getText(),
"Sequence 2 ID: Seq2 Residue: B (2)");
}
assertNull(SeqPanel.getEditStatusMessage(edit));
SequenceI[] seqs = new SequenceI[] { new Sequence("a", "b") };
-
+
// 1 gap
edit.addEdit(edit.new Edit(Action.INSERT_GAP, seqs, 1, 1, '-'));
String expected = MessageManager.formatMessage("label.insert_gap", "1");
{
EditCommand edit = new EditCommand(); // empty
SequenceI[] seqs = new SequenceI[] { new Sequence("a", "b") };
-
+
// 1 gap inserted, balanced by 1 delete
Edit e1 = edit.new Edit(Action.INSERT_GAP, seqs, 1, 1, '-');
edit.addEdit(e1);
edit.addEdit(e2);
String expected = MessageManager.formatMessage("label.insert_gap", "1");
assertEquals(SeqPanel.getEditStatusMessage(edit), expected);
-
+
// 2 more gaps makes +3
Edit e3 = edit.new Edit(Action.INSERT_GAP, seqs, 1, 2, '-');
edit.addEdit(e3);
edit.addEdit(e4);
expected = MessageManager.formatMessage("label.insert_gaps", "3");
assertEquals(SeqPanel.getEditStatusMessage(edit), expected);
-
+
// 2 deletes makes + 1
Edit e5 = edit.new Edit(Action.DELETE_GAP, seqs, 1, 2, '-');
edit.addEdit(e5);
edit.addEdit(e6);
expected = MessageManager.formatMessage("label.insert_gap", "1");
assertEquals(SeqPanel.getEditStatusMessage(edit), expected);
-
+
// 1 more delete makes 0 - no text
Edit e7 = edit.new Edit(Action.DELETE_GAP, seqs, 1, 1, '-');
edit.addEdit(e7);
edit.addEdit(e8);
expected = MessageManager.formatMessage("label.insert_gaps", "2");
assertNull(SeqPanel.getEditStatusMessage(edit));
-
+
// 1 more delete makes 1 delete
Edit e9 = edit.new Edit(Action.DELETE_GAP, seqs, 1, 1, '-');
edit.addEdit(e9);
edit.addEdit(e10);
expected = MessageManager.formatMessage("label.delete_gap", "1");
assertEquals(SeqPanel.getEditStatusMessage(edit), expected);
-
+
// 2 more deletes makes 3 deletes
Edit e11 = edit.new Edit(Action.DELETE_GAP, seqs, 1, 2, '-');
edit.addEdit(e11);
/*
* mouse at top left of unwrapped panel
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, y, 0, 0, 0, false, 0);
MousePos pos = testee.findMousePosition(evt);
assertEquals(pos.column, 0);
assertEquals(pos.seqIndex, 0);
final int charHeight = av.getCharHeight();
final int charWidth = av.getCharWidth();
final int alignmentHeight = av.getAlignment().getHeight();
-
+
// sanity checks:
assertTrue(charHeight > 0);
assertTrue(charWidth > 0);
assertTrue(alignFrame.alignPanel.getSeqPanel().getWidth() > 0);
-
+
SeqPanel testee = alignFrame.alignPanel.getSeqPanel();
int x = 0;
int y = 0;
-
+
/*
* mouse at top left of wrapped panel; there is a gap of charHeight
* above the alignment
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, y, 0, 0, 0, false, 0);
MousePos pos = testee.findMousePosition(evt);
assertEquals(pos.column, 0);
assertEquals(pos.seqIndex, -1); // above sequences
* cursor at bottom of gap above
*/
y = charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
* cursor over top of first sequence
*/
y = charHeight;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of first sequence
*/
y = 2 * charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
* cursor at top of second sequence
*/
y = 2 * charHeight;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 1);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of second sequence
*/
y = 3 * charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 1);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of last sequence
*/
y = charHeight * (1 + alignmentHeight) - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
* method reports index of nearest sequence above
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
* cursor still in the gap above annotations, now at the bottom of it
*/
y += SeqCanvas.SEQS_ANNOTATION_GAP - 1; // 3-1 = 2
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
* cursor at the top of the n'th annotation
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0,
+ 0, 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, n); // over n'th annotation
* cursor at the bottom of the n'th annotation
*/
y += annotationRows[n].height - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0,
+ 0, 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, n);
* cursor in gap between wrapped widths
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of gap between wrapped widths
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
* cursor at top of first sequence, second wrapped width
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
final int charHeight = av.getCharHeight();
final int charWidth = av.getCharWidth();
final int alignmentHeight = av.getAlignment().getHeight();
-
+
// sanity checks:
assertTrue(charHeight > 0);
assertTrue(charWidth > 0);
assertTrue(alignFrame.alignPanel.getSeqPanel().getWidth() > 0);
-
+
SeqPanel testee = alignFrame.alignPanel.getSeqPanel();
int x = 0;
int y = 0;
-
+
/*
* mouse at top left of wrapped panel; there is a gap of charHeight
* above the alignment
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, y, 0, 0, 0, false, 0);
MousePos pos = testee.findMousePosition(evt);
assertEquals(pos.column, 0);
assertEquals(pos.seqIndex, -1); // above sequences
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at bottom of gap above
* two charHeights including scale panel
*/
y = 2 * charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor over top of first sequence
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at bottom of first sequence
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at top of second sequence
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at bottom of second sequence
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at bottom of last sequence
* (scale + gap + sequences)
*/
y = charHeight * (2 + alignmentHeight) - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor below sequences, in 3-pixel gap above annotations
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor still in the gap above annotations, now at the bottom of it
* method reports index of nearest sequence above
*/
y += SeqCanvas.SEQS_ANNOTATION_GAP - 1; // 3-1 = 2
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
-
- AlignmentAnnotation[] annotationRows = av.getAlignment().getAlignmentAnnotation();
+
+ AlignmentAnnotation[] annotationRows = av.getAlignment()
+ .getAlignmentAnnotation();
for (int n = 0; n < annotationRows.length; n++)
{
/*
* cursor at the top of the n'th annotation
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0,
+ 0, 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, n); // over n'th annotation
* cursor at the bottom of the n'th annotation
*/
y += annotationRows[n].height - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0,
+ 0, 0, false, 0);
pos = testee.findMousePosition(evt);
SeqCanvas sc = testee.seqCanvas;
assertEquals(pos.seqIndex, alignmentHeight - 1,
sc.wrappedSpaceAboveAlignment));
assertEquals(pos.annotationIndex, n);
}
-
+
/*
* cursor in gap between wrapped widths
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at bottom of gap between wrapped widths
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at top of scale, second wrapped width
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of scale, second wrapped width
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
* cursor at top of first sequence, second wrapped width
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
final int charHeight = av.getCharHeight();
final int charWidth = av.getCharWidth();
final int alignmentHeight = av.getAlignment().getHeight();
-
+
// sanity checks:
assertTrue(charHeight > 0);
assertTrue(charWidth > 0);
assertTrue(alignFrame.alignPanel.getSeqPanel().getWidth() > 0);
-
+
SeqPanel testee = alignFrame.alignPanel.getSeqPanel();
int x = 0;
int y = 0;
-
+
/*
* mouse at top left of wrapped panel; there is a gap of charHeight
* above the alignment
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, y, 0, 0, 0, false, 0);
MousePos pos = testee.findMousePosition(evt);
assertEquals(pos.column, 0);
assertEquals(pos.seqIndex, -1); // above sequences
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor over top of first sequence
*/
y = charHeight;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
* cursor at bottom of last sequence
*/
y = charHeight * (1 + alignmentHeight) - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, alignmentHeight - 1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor below sequences, at top of charHeight gap between widths
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor below sequences, at top of charHeight gap between widths
*/
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor at the top of the first sequence, second width
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.annotationIndex, -1);
/*
* mouse at top left of unwrapped panel
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, 0, 0, 0, 0, false, 0);
assertEquals(testee.findColumn(evt), 0);
-
+
/*
* not quite one charWidth across
*/
- x = charWidth-1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0,
- 0, 0, 0, false, 0);
+ x = charWidth - 1;
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 0);
/*
* one charWidth across
*/
x = charWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 1);
/*
* two charWidths across
*/
x = 2 * charWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 2);
/*
* limited to last column of seqcanvas
*/
x = 20000;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
SeqCanvas seqCanvas = alignFrame.alignPanel.getSeqPanel().seqCanvas;
int w = seqCanvas.getWidth();
// limited to number of whole columns, base 0,
alignFrame.getViewport().hideColumns(4, 9);
x = 5 * charWidth + 2;
// x is in 6th visible column, absolute column 12, or 11 base 0
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 11);
}
final int charWidth = av.getCharWidth();
assertTrue(charWidth > 0); // sanity check
assertEquals(av.getRanges().getStartRes(), 0);
-
+
/*
* mouse at top left of wrapped panel, no West (left) scale
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, 0, 0, 0, 0, false, 0);
assertEquals(testee.findColumn(evt), 0);
-
+
/*
* not quite one charWidth across
*/
- x = charWidth-1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0,
- 0, 0, 0, false, 0);
+ x = charWidth - 1;
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 0);
-
+
/*
* one charWidth across
*/
x = charWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 1);
/*
int labelWidth = (int) PA.getValue(seqCanvas, "labelWidthWest");
assertTrue(labelWidth > 0);
x = labelWidth - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), -1);
x = labelWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), 0);
/*
int residuesWide = av.getRanges().getViewportWidth();
assertTrue(residuesWide > 0);
x = labelWidth + charWidth * residuesWide - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), residuesWide - 1);
/*
assertTrue(residuesWide2 > 0);
assertTrue(residuesWide2 < residuesWide); // available width reduced
x += 1; // just over left edge of scale right
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, 0, 0, 0,
+ 0, false, 0);
assertEquals(testee.findColumn(evt), -1);
-
+
// todo add startRes offset, hidden columns
}
+
@BeforeClass(alwaysRun = true)
public static void setUpBeforeClass() throws Exception
{
e.printStackTrace();
}
}
+
@Test(groups = "Functional")
public void testFindMousePosition_wrapped_scales_longSequence()
{
Cache.applicationProperties.setProperty("FONT_STYLE", "0");
// sequence of 50 bases, doubled 10 times, = 51200 bases
String dna = "ATGGCCATTGGGCCCAAATTTCCCAAAGGGTTTCCCTGAGGTCAGTCAGA";
- for (int i = 0 ; i < 10 ; i++)
+ for (int i = 0; i < 10; i++)
{
dna += dna;
}
assertEquals(dna.length(), 51200);
- AlignFrame alignFrame = new FileLoader().LoadFileWaitTillLoaded(dna,
- DataSourceType.PASTE);
+ AlignFrame alignFrame = new FileLoader()
+ .LoadFileWaitTillLoaded("dna "+dna, DataSourceType.PASTE);
SeqPanel testee = alignFrame.alignPanel.getSeqPanel();
AlignViewport av = alignFrame.getViewport();
av.setScaleAboveWrapped(true);
} catch (InterruptedException e)
{
}
-
+
final int charHeight = av.getCharHeight();
final int charWidth = av.getCharWidth();
assertEquals(charHeight, 17);
assertEquals(charWidth, 12);
-
+
FontMetrics fm = testee.getFontMetrics(av.getFont());
int labelWidth = fm.stringWidth("00000") + charWidth;
assertEquals(labelWidth, 57); // 5 x 9 + charWidth
int x = 0;
int y = 0;
-
+
/*
* mouse at top left of wrapped panel; there is a gap of 2 * charHeight
* above the alignment
*/
- MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y,
- 0, 0, 0, false, 0);
+ MouseEvent evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0,
+ x, y, 0, 0, 0, false, 0);
MousePos pos = testee.findMousePosition(evt);
assertEquals(pos.column, -1); // over scale left, not an alignment column
assertEquals(pos.seqIndex, -1); // above sequences
*/
y += charHeight;
x = labelWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.column, 0);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor over scale left of first sequence
*/
y += charHeight;
x = 0;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.column, -1);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* cursor over start of first sequence
*/
x = labelWidth;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.column, 0);
assertEquals(pos.annotationIndex, -1);
-
+
/*
* move one character right, to bottom pixel of same row
*/
x += charWidth;
y += charHeight - 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.column, 1);
-
+
/*
* move down one pixel - now in the no man's land between rows
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.column, 1);
-
+
/*
* move down two char heights less one pixel - still in the no man's land
* (scale above + spacer line)
*/
y += (2 * charHeight - 1);
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, -1);
assertEquals(pos.column, 1);
-
+
/*
* move down one more pixel - now on the next row of the sequence
*/
y += 1;
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
assertEquals(pos.column, 1 + av.getWrappedWidth());
-
+
/*
* scroll to near the end of the sequence
*/
SearchResultsI sr = new SearchResults();
int scrollTo = dna.length() - 1000;
- sr.addResult(av.getAlignment().getSequenceAt(0), scrollTo, scrollTo);
+ sr.addResult(av.getAlignment().getSequenceAt(0), scrollTo, scrollTo);
alignFrame.alignPanel.scrollToPosition(sr);
-
+
/*
* place the mouse on the first column of the 6th sequence, and
* verify that (computed) findMousePosition matches (actual) ViewportRanges
*/
x = labelWidth;
y = 17 * charHeight; // 17 = 6 times two header rows and 5 sequence rows
- evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0, 0,
- false, 0);
+ evt = new MouseEvent(testee, MouseEvent.MOUSE_MOVED, 0L, 0, x, y, 0, 0,
+ 0, false, 0);
pos = testee.findMousePosition(evt);
assertEquals(pos.seqIndex, 0);
int expected = av.getRanges().getStartRes() + 5 * av.getWrappedWidth();
git://source.jalview.org / jalview.git / commitdiff