git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-2110 use shared dataset when copying alignment for split frame
2016-07-04 gmungocJAL-2110 use shared dataset when copying alignment...
commit | commitdiff | tree
2016-07-04 gmungocJAL-2110 added another test case (should fail but doesn't)
 commit | commitdiff | tree
2016-07-04 gmungocRevert "JAL-2110 use shared alignment dataset when...
commit | commitdiff | tree
2016-07-04 gmungocJAL-2110 use shared alignment dataset when copying...
commit | commitdiff | tree
2016-07-04 gmungocJAL-2110 bug fix / test for searchDataset mappings...
commit | commitdiff | tree
2016-07-04 gmungocJAL-2110 unused method removed
 commit | commitdiff | tree
2016-07-04 gmungocJAL-2110 defensive check in code
 commit | commitdiff | tree
2016-07-01 gmungocJAL-2110 bug fixing and tidying for get cross-refs
 commit | commitdiff | tree
2016-07-01 gmungocJAL-2110 set reasonable bounds to initial split of...
commit | commitdiff | tree
2016-07-01 gmungocJAL-2110 add 'products' parameter to filter results...
commit | commitdiff | tree
2016-07-01 gmungocJAL-2110 code/comment tidy
 commit | commitdiff | tree
2016-06-30 gmungocMerge branch 'develop' into features/JAL-2110_crossRefDuplic...
commit | commitdiff | tree
2016-06-30 gmungocJAL-2110 fixes and tests for synthesized EMBLCDSPROTEIN...
commit | commitdiff | tree
2016-06-30 gmungocMerge branch 'develop' into features/JAL-2110_crossRefDuplic...
commit | commitdiff | tree
2016-06-29 gmungocMerge branch 'develop' into features/JAL-2110_crossRefDuplic...
commit | commitdiff | tree
2016-06-29 gmungocJAL-1270 avoid overwriting .jalview_properties with...
commit | commitdiff | tree
2016-06-29 gmungocMerge branch 'develop' into features/JAL-2110_crossRefDuplic...
commit | commitdiff | tree
2016-06-29 gmungocJAL-1369 fix bug reloading a project with group sequence...
commit | commitdiff | tree
2016-06-27 gmungoctidied loop with generic iteration / loop variable
 commit | commitdiff | tree
2016-06-27 gmungocJAL-2133 refactored duplicated code to AlignmentViewport
 commit | commitdiff | tree
2016-06-27 gmungocJAL-1369 additional asserts in testStoreAndRecoverReferenceS...
commit | commitdiff | tree
2016-06-27 gmungocJAL-1270 unit tests for HiddenSequences
 commit | commitdiff | tree
2016-06-23 gmungocJAL-2130 now simply viewer.dispose() to close down...
commit | commitdiff | tree
2016-06-22 gmungocJAL-2015 fixed bug in copy constructor and added tests
 commit | commitdiff | tree
2016-06-22 gmungocJAL-1982 defensive checks for null annotations array
 commit | commitdiff | tree
2016-06-22 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-06-22 gmungocJAL-1982 defensive test for null array of annotations
 commit | commitdiff | tree
2016-06-21 gmungocJAL-2074 suppress prompt to save closed Groovy script...
commit | commitdiff | tree
2016-06-21 gmungocJAL-1270 remove test artefact file after test
 commit | commitdiff | tree
2016-06-21 gmungocJAL-1270 added runAlways=true to setUp method
 commit | commitdiff | tree
2016-06-21 gmungocJAL-2074 reuse Groovy window when reopening; rebind...
commit | commitdiff | tree
2016-06-21 gmungocJAL-2110 updated unit test to match code changes
 commit | commitdiff | tree
2016-06-21 gmungocJAL-2113 tidy up canonicalisation of Uniprot xrefs...
commit | commitdiff | tree
2016-06-21 gmungocJAL-2113 tidy up canonicalisation of Uniprot xrefs...
commit | commitdiff | tree
2016-06-20 gmungocJAL-2130 call viewer.dispose() on closing Jmol
 commit | commitdiff | tree
2016-06-20 gmungocJAL-1667 updated PDB example query to a valid id (without...
commit | commitdiff | tree
2016-06-17 gmungocJAL-1557 selection from annotation (and group annotation...
commit | commitdiff | tree
2016-06-16 gmungocJAL-1993 close sequence fetcher when opening database...
commit | commitdiff | tree
2016-06-16 gmungocJAL-2124 JAL-1990 additional translations
 commit | commitdiff | tree
2016-06-16 gmungocJAL-2112 optimisation of EMBL CDS parsing
 commit | commitdiff | tree
2016-06-16 gmungocJAL-1993 hide sequence fetcher dialogue until database...
commit | commitdiff | tree
2016-06-15 gmungocJAL-2025 unit tests added
 commit | commitdiff | tree
2016-06-15 gmungocJAL-2101 unit test updated to match config file
 commit | commitdiff | tree
2016-06-14 gmungocJAL-2114 more helpful reporting of parse failures
 commit | commitdiff | tree
2016-06-14 gmungocMerge branch 'develop' into features/JAL-2110_crossRefDuplic...
commit | commitdiff | tree
2016-06-14 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-06-14 gmungocJAL-2110 fixes to dbref resolution and mappings, use...
commit | commitdiff | tree
2016-06-14 gmungocJAL-2110 ensure "UniProtKB/Swiss-Prot" dbrefs canonicalised...
commit | commitdiff | tree
2016-06-14 gmungocJAL-1686 JAL-2110 equals and/or hashCode method added
 commit | commitdiff | tree
2016-06-09 gmungocJAL-2110 work in progress
 commit | commitdiff | tree
2016-06-09 gmungocMerge branch 'develop' into features/JAL-2110_makeSenseOfCro...
commit | commitdiff | tree
2016-06-09 gmungocJAL-2114 corrected Javadoc
 commit | commitdiff | tree
2016-06-03 gmungocJAL-2110 random stuff
 commit | commitdiff | tree
2016-06-02 gmungocMerge branch 'develop' into features/JAL-2110_makeSenseOfCro...
commit | commitdiff | tree
2016-06-02 gmungocJAL-2124 additional Spanish text strings
 commit | commitdiff | tree
2016-06-02 gmungocMerge branch 'develop' into features/JAL-2110_makeSenseOfCro...
commit | commitdiff | tree
2016-06-02 gmungocJAL-1424 corrected typos in message text keys
 commit | commitdiff | tree
2016-06-02 gmungocJAL-1424 removed duplicate entry and unneeded full...
commit | commitdiff | tree
2016-06-01 gmungocJAL-1424 clearer messaging
 commit | commitdiff | tree
2016-06-01 gmungocJAL-1424 utility to check resource bundle labels used...
commit | commitdiff | tree
2016-05-31 gmungocJAL-2023 adjustments to mappings added for split frame...
commit | commitdiff | tree
2016-05-31 gmungocJAL-2110 refactor + tests to allow a dbref version...
commit | commitdiff | tree
2016-05-31 gmungocJAL-1011 JAL-1989 don't mirror column-only selections...
commit | commitdiff | tree
2016-05-31 gmungocJAL-2123 use "rlabel" command to highlight with label...
commit | commitdiff | tree
2016-05-30 gmungocJAL-1670 JAL-2018 updated unit test for added example...
commit | commitdiff | tree
2016-05-30 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-05-30 gmungocJAL-1989 equals method strengthened to fully match...
commit | commitdiff | tree
2016-05-30 gmungocJAL-2119 help links checker added to /utils
 commit | commitdiff | tree
2016-05-30 gmungocJAL-2119 updated Valdar group link
 commit | commitdiff | tree
2016-05-29 gmungocJAL-2119 fixes for broken links in help files
 commit | commitdiff | tree
2016-05-27 gmungocJAL-1989 tightened up use of flag for 'column selection...
commit | commitdiff | tree
2016-05-27 gmungocJAL-1989 added hashCode and equals, renamed field to...
commit | commitdiff | tree
2016-05-27 gmungocJAL-1911 use existing object when setting 'Prompt each...
commit | commitdiff | tree
2016-05-27 gmungocJAL-1942 small tidy (formatting, explict imports, typed...
commit | commitdiff | tree
2016-05-27 gmungocJAL-1911 correct typo in field name
 commit | commitdiff | tree
2016-05-26 gmungocJAL-391 add reverse / complement to command history...
commit | commitdiff | tree
2016-05-26 gmungocJAL-2035 relocated a comment
 commit | commitdiff | tree
2016-05-26 gmungocJAL-1670 add non-positional feature with link to demonstrate...
commit | commitdiff | tree
2016-05-26 gmungocJAL-1993 open sequence fetcher tree on 'fetch sequences'
 commit | commitdiff | tree
2016-05-26 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-05-26 gmungocJAL-1797 non-case-sensitive counting of residues /...
commit | commitdiff | tree
2016-05-26 gmungocJAL-2008 drag to reorder features not available in...
commit | commitdiff | tree
2016-05-26 gmungocJAL-2079 update examples to new pfam.xfam.org domain
 commit | commitdiff | tree
2016-05-26 gmungocJAL-2113 additions to embl_mapping.xml / data models...
commit | commitdiff | tree
2016-05-25 gmungocJAL-2110 wip CrossRefs rewrite of CrossRef
 commit | commitdiff | tree
2016-05-23 gmungocJAL-2113 remove spaces in sequence from unmarshalling...
commit | commitdiff | tree
2016-05-23 gmungocMerge branch 'develop' into features/JAL-2110_makeSenseOfCro...
commit | commitdiff | tree
2016-05-23 gmungocJAL-2114 save 'raw' ENA location as a sequence feature...
commit | commitdiff | tree
2016-05-23 gmungocJAL-2113 tidy variable naming / javadoc
 commit | commitdiff | tree
2016-05-23 gmungocJAL-2113 EBIFetchClient refactor / unit tests / remove...
commit | commitdiff | tree
2016-05-23 gmungocMerge branch 'develop' into features/JAL-2113_emblXml1.2
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2114 explicit invalid test cases added
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2113 corrected test to use valid location syntax
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2113 removed classes deleted from mapping
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2113 embl_mapping.xml and code updated for EMBL...
commit | commitdiff | tree
2016-05-20 gmungocJAL-2114 accept "<123..178" or "123..>178" format
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2115 updated web link for MAFFT (and one typo)
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2110 unit tests for and minor refactoring of CrossRef
 commit | commitdiff | tree
2016-05-20 gmungocJAL-2049 unit test updated for HGVS syntax, feature...
commit | commitdiff | tree
2016-05-19 gmungocJAL-2114 added single-locus case and more error tests
 commit | commitdiff | tree
next