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2010-06-12	jprocter	documented the -colour command line argument.	commit \| commitdiff \| tree
2010-06-11	jprocter	stockholm added as readable format (Lauren Lui commit)	commit \| commitdiff \| tree
2010-06-11	jprocter	ensure enfin service is started in background when...	commit \| commitdiff \| tree
2010-06-11	jprocter	jalview 2.5.1 release notes	commit \| commitdiff \| tree
2010-06-11	jprocter	patch for JAL-556 - more robust mapping of sequence...	commit \| commitdiff \| tree
2010-06-11	jprocter	patch for JAL-556	commit \| commitdiff \| tree
2010-06-11	jprocter	patched for JAL-531 - only display full symbol distribution...	commit \| commitdiff \| tree
2010-06-09	jprocter	patch for JAL-545 - make deep copy of feature settings	commit \| commitdiff \| tree
2010-06-09	jprocter	patch for JAL-555	commit \| commitdiff \| tree
2010-06-09	jprocter	paste menu display on OSX Leopard * JAL-557	commit \| commitdiff \| tree
2010-06-09	jprocter	OSX look and feel JAL-577	commit \| commitdiff \| tree
2010-06-08	jprocter	followSelections flag now set via user preferences...	commit \| commitdiff \| tree
2010-06-08	jprocter	better test for when to update column selection when...	commit \| commitdiff \| tree
2010-06-08	jprocter	trim hidden regions outside selection when copying...	commit \| commitdiff \| tree
2010-06-08	jprocter	Patch for incorrect column selection when hidden regions...	commit \| commitdiff \| tree
2010-06-06	jprocter	patch for JAL-542	commit \| commitdiff \| tree
2010-06-06	jprocter	Fix for * JAL-541	commit \| commitdiff \| tree
2010-06-04	jprocter	resolution for * JAL-553	commit \| commitdiff \| tree
2010-06-04	jprocter	update group annotation for new treegroups (JAL-552)	commit \| commitdiff \| tree
2010-06-04	jprocter	correct popup menu, ensure panel doesn't disappear...	commit \| commitdiff \| tree
2010-06-04	jprocter	first patch for JAL-563 - attempt to relayout annotation...	commit \| commitdiff \| tree
2010-06-04	jprocter	ensure panel doesn't disappear when empty (patches...	commit \| commitdiff \| tree
2010-06-04	jprocter	patches for JAL-554 and JAL-570	commit \| commitdiff \| tree
2010-06-04	jprocter	focus is explicitly handed back to caller (JAL-566)	commit \| commitdiff \| tree
2010-06-04	jprocter	focus is explicitly handed back to caller (JAL-566)	commit \| commitdiff \| tree
2010-06-03	jprocter	typo (ahem)	commit \| commitdiff \| tree
2010-06-03	jprocter	patch re JAL-554	commit \| commitdiff \| tree
2010-06-03	jprocter	patch ensuring annotation is output correctly re *...	commit \| commitdiff \| tree
2010-06-03	jprocter	patch and error reports re JAL-554	commit \| commitdiff \| tree
2010-06-03	jprocter	javadoc re JAL-554	commit \| commitdiff \| tree
2010-06-03	jprocter	fix and warning message in case the JWS2 jar is not...	commit \| commitdiff \| tree
2010-06-01	jprocter	patches for # JAL-254 and JAL-548	commit \| commitdiff \| tree
2010-05-21	jprocter	more robust discovery and preset support	commit \| commitdiff \| tree
2010-05-21	jprocter	preset and argument support	commit \| commitdiff \| tree
2010-05-21	jprocter	comment about trapping OOMs	commit \| commitdiff \| tree
2010-05-21	jprocter	commented out debug code	commit \| commitdiff \| tree
2010-05-21	jprocter	quick workaround for JAL-537.	commit \| commitdiff \| tree
2010-05-17	jprocter	status can be null to begin with	commit \| commitdiff \| tree
2010-05-17	jprocter	pullJobExecutionStats for JAL-493	commit \| commitdiff \| tree
2010-05-17	jprocter	minor fix for * JAL-537	commit \| commitdiff \| tree
2010-05-17	jprocter	more robust jws2 service discovery	commit \| commitdiff \| tree
2010-05-17	jprocter	refactored old jalview service code to its own package.	commit \| commitdiff \| tree
2010-05-17	jprocter	always pass full web service exception details to the log	commit \| commitdiff \| tree
2010-05-17	jprocter	always pass full web service exception details to the log	commit \| commitdiff \| tree
2010-05-17	jprocter	always log info about services that are discovered	commit \| commitdiff \| tree
2010-05-14	jprocter	First patch for * JAL-493	commit \| commitdiff \| tree
2010-05-14	jprocter	First patch for * JAL-493	commit \| commitdiff \| tree
2010-05-14	jprocter	standard function for bootstrapping discovery threads	commit \| commitdiff \| tree
2010-05-14	jprocter	allow initLogger to be called multiple times	commit \| commitdiff \| tree
2010-05-14	jprocter	partial patch for * JAL-466	commit \| commitdiff \| tree
2010-05-14	jprocter	fix for JAL-533	commit \| commitdiff \| tree
2010-05-12	jprocter	debug comment	commit \| commitdiff \| tree
2010-05-12	jprocter	patch for JAL-528	commit \| commitdiff \| tree
2010-05-12	jprocter	fix for JAL-527	commit \| commitdiff \| tree
2010-05-01	jprocter	jalview 2.5 documentation (still)	commit \| commitdiff \| tree
2010-05-01	jprocter	branched 2.5 version	commit \| commitdiff \| tree
2010-05-01	jprocter	relocatable reference to build file and dropped groovy...	commit \| commitdiff \| tree
2010-05-01	jprocter	href for version	commit \| commitdiff \| tree
2010-04-30	jprocter	2.5 release details	commit \| commitdiff \| tree
2010-04-30	jprocter	2.5 release notes	commit \| commitdiff \| tree
2010-04-30	jprocter	get the html header comment right!	commit \| commitdiff \| tree
2010-04-30	jprocter	get the html header comment right!	commit \| commitdiff \| tree
2010-04-30	jprocter	tidying for 2.5 release	commit \| commitdiff \| tree
2010-04-30	jprocter	patch for bug #59999	commit \| commitdiff \| tree
2010-04-30	jprocter	doc	commit \| commitdiff \| tree
2010-04-30	jprocter	sort by length	commit \| commitdiff \| tree
2010-04-30	jprocter	jalview 2.5 release banner	commit \| commitdiff \| tree
2010-04-30	jprocter	jalview 2.5 release banner	commit \| commitdiff \| tree
2010-04-30	jprocter	classpath for eclipse is shared	commit \| commitdiff \| tree
2010-04-30	jprocter	2.5 doc	commit \| commitdiff \| tree
2010-04-30	jprocter	2.5 hidden capabilities	commit \| commitdiff \| tree
2010-04-30	jprocter	vamsas 0.2 client capabilities	commit \| commitdiff \| tree
2010-04-29	jprocter	make sure references are intact when group annotation...	commit \| commitdiff \| tree
2010-04-29	jprocter	highlighting/selecting is application only for 2.5...	commit \| commitdiff \| tree
2010-04-29	jprocter	2.5 release doc	commit \| commitdiff \| tree
2010-04-29	jprocter	isAligned assertion (bug 0008144)	commit \| commitdiff \| tree
2010-04-29	jprocter	property change race condition (bug 0062693) and isAligned...	commit \| commitdiff \| tree
2010-04-29	jprocter	hide/show selected region menu entries and key bindings	commit \| commitdiff \| tree
2010-04-29	jprocter	new selection manipulation method	commit \| commitdiff \| tree
2010-04-29	jprocter	popup menu toggles between graduated colour and single...	commit \| commitdiff \| tree
2010-04-29	jprocter	osx pixel tweak	commit \| commitdiff \| tree
2010-04-29	jprocter	eclipse source code formatting	commit \| commitdiff \| tree
2010-04-29	jprocter	share eclipse settings	commit \| commitdiff \| tree
2010-04-28	jprocter	jog pixels for OSX	commit \| commitdiff \| tree
2010-04-28	jprocter	osx button colouring issue	commit \| commitdiff \| tree
2010-04-28	jprocter	jog pixels for OSX	commit \| commitdiff \| tree
2010-04-28	jprocter	find incrementally searches ID then subsequence matches...	commit \| commitdiff \| tree
2010-04-28	jprocter	find incrementally searches ID then subsequence matches.	commit \| commitdiff \| tree
2010-04-28	jprocter	excludes	commit \| commitdiff \| tree
2010-04-28	jprocter	check class versions	commit \| commitdiff \| tree
2010-04-28	jprocter	2.5 updates...	commit \| commitdiff \| tree
2010-04-28	jprocter	graduated feature schemes	commit \| commitdiff \| tree
2010-04-28	jprocter	typo	commit \| commitdiff \| tree
2010-04-28	jprocter	envision2 service	commit \| commitdiff \| tree
2010-04-28	jprocter	better ui description	commit \| commitdiff \| tree
2010-04-28	jprocter	make groups function	commit \| commitdiff \| tree
2010-04-28	jprocter	graduated feature schemes (with visual indication of...	commit \| commitdiff \| tree
2010-04-28	jprocter	group/annotation association, logos, autocalc group...	commit \| commitdiff \| tree
2010-04-28	jprocter	null pointer when double click event occurs without...	commit \| commitdiff \| tree
2010-04-28	jprocter	make groups from selection	commit \| commitdiff \| tree
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