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jalview.git
2017-11-17 kjvdheideJAL-2805 code refactor (actionPerformed cleaned up... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 source code licencing commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 tidy up release notes commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2805 reorganized code, tree building goes through... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2795 removed unneeded distancematrix length/width... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2844 changed Aptx config to make all cladogram... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 Cached PDB Entries -> Cached Structures in... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2466 revised help text for sort by PID commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 what’s new and release notes commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideMerge branch 'kjvdh/features/PhylogenyViewer' of commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2822 known defect for 2.10.3 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2784' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2841 JAL-2791 new known defect

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2017-11-17 Jim ProcterJAL-2541 known defect commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2805 couple of method name changes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2684 clarify release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2821' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2840 release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2837' into develop commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'doc/JAL-2494_JAL-2828_mergefindAnnotation... commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2811 release note commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2541 not in 2.10.3, JAL-2831 signed off. commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 11th hour release today commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-281 added menu items and listeners to load from... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-281 changed load associated tree GUI item to menu... commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterJAL-2541 JAL-2829 JAL-2830 JAL-2822 catch all release... commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into... commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-16 kjvdheideJAL-2805 expanded tree and treenode interfaces commit | commitdiff | tree | snapshot
2017-11-16 kjvdheideJAL-2805 loads of file reorganizing, interfaces expanded commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2842 remove infinite loop in cursor move bug/JAL-2842 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region commit | commitdiff | tree | snapshot
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at... commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode... commit | commitdiff | tree | snapshot
2017-11-15 kjvdheideJAL-2805 functional binding on loading associated trees commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 ported to applet commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidies and tests commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 viewport is passed along to the tree parser commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2795 added duplication check when calculated nodes... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 added getters for hashmaps filled with associa... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 added static method for logging duplications... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 more sensible interface method params commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidy commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 finished up interface comments commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 re-enabled one2many checks commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 interface comments, progress on associating... commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context... commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Missed commit commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode commit | commitdiff | tree | snapshot
2017-11-14 Jim ProcterJAL-2758 update uniprot retrieval test commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 deal with hidden cols and seqs in new cursor... commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor... commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 release notes commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2698 formatting commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 interface comments commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 some more name changes commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 more name changes for clarity commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 more interface name changing commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 name changed of interfaces for consistency commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 Jalview sequence binding interface expanded commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 TreeParser now interface based commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAL-2811 Tidy commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 Added tree building interface commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 name change commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 deleted old Aptx class for loading just Newick... commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 more interface work commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2794 removed unused interface commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 undid accidental double (buggy) binding, more... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 remove configurable behaviour - Uniprot sequen... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 typo commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAl-2811 Working for wrapped panels too commit | commitdiff | tree | snapshot
2017-11-13 gmungocJAL-2662 tweak README, format code commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2698 what's new... commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAL-2811 Add layer for cursor in SeqCanvas commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 warning messages added if Forester detects... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2810 release notes commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterMerge branch 'imp/JAL-2810_ftsIDtab' into develop commit | commitdiff | tree | snapshot
2017-11-13 kjvdheideJAL-2805 First try at loading tree through Forester... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2698 stub for 2.10.3 new known issues entries commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2702 groovy interpreter update and java 9 jnlp... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterMerge branch 'bug/JAL-2702_groovyconsoleJava9' into... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2702 --illegal-access=warn for JVM launch commit | commitdiff | tree | snapshot
2017-11-13 gmungocJAL-2176 removed unused Sequence.index commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2702 update to groovy 2.4.12 commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2810 updated help docs for auto search checkbox... commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAL-2784 new checks for gg==null bug/JAL-2784 commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2810 updated screenshots in documentation commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2810 auto search checkbox state stored as user... commit | commitdiff | tree | snapshot
2017-11-13 gmungocJAL-2679 example accession changed to CAD01290 commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2810 mainFramTabs -> tabs commit | commitdiff | tree | snapshot
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