Add some recommended attributes to javac tasks
[jabaws.git] / runner /
2013-10-14 Sasha SherstnevRe-design jpred.pl input options: no -seq for a file...
2013-10-14 Sasha SherstnevDefine path to UNIREF database in conf/Executable.prope...
2013-10-03 Sasha SherstnevFix wrong error message
2013-09-24 Sasha SherstnevAdd all needed infrastructure for MSAprobs and GLprobs
2013-09-20 Sasha SherstnevRefactoring: rename duplicated Util classes
2013-09-19 Sasha SherstnevJWS-17: fix problem with undefined URL for the furtherD...
2013-09-17 Sasha SherstnevClean up logging system
2013-09-06 Sasha SherstnevMerge branch 'JABAWS_Release_2_5' into develop
2013-09-06 Sasha SherstnevSwitch JpredWS from SequenceAnnotation to MsaWS
2013-08-30 Daniel BartonClean-up, refactoring, commenting. Parameters file...
2013-08-21 Daniel BartonReverted some changes I made for testing back to their...
2013-08-21 Daniel BartonRNAStruct replaced by RNAStructScoreManager. Why does...
2013-08-15 Daniel BartonAlifold results are now parsed and stored in a ScoreMan...
2013-08-12 Daniel BartonWebservice which implements FoldWS and returns String...
2013-08-08 Daniel BartonWebservice works! but only supports some parameters...
2013-08-07 Sasha SherstnevNecessary modifications in JABAWS for Jpred
2013-08-05 Daniel BartonSimple datamodel for RNAalifold.exe output and method...
2013-08-04 Daniel BartonParameters Tester updated. Untested webservice code...
2013-08-03 Daniel BartonBasic Testing Setup, no getResults method yet
2013-08-02 Sasha SherstnevAdd Java wrapper class for Jpred
2013-08-02 Sasha SherstnevImpove coding style
2013-08-01 Daniel BartonRNAalifold.java runner and RNAalifoldTester incomplete
2013-04-24 Sashadelete wronigly located log4j.properties
2012-05-15 jprocterremove jabaws 3 development code
2011-08-12 pvtroshinJavadoc fixes
2011-08-11 pvtroshinChange header template for a new version
2011-08-04 pvtroshinComments
2011-08-04 pvtroshinClustal Omega web service wrapper and tester
2011-08-03 pvtroshinWrapper for Clustal Omega.
2011-06-30 pvtroshinobtain JAVA executable path from the JAVA_HOME variable...
2011-06-27 pvtroshinBuild script improvements & updated util
2011-06-24 pvtroshinGet rid of unused code
2011-06-21 pvtroshinRevert multithreading support for mafft as it does...
2011-06-21 pvtroshinGet rind of NativeClusterJob interface as pretty much...
2011-06-20 pvtroshinnew version of muscle 3.8.31
2011-06-17 pvtroshinRefactoring of all SequenceAnnotation web services
2011-06-16 pvtroshinIUPred final touches. All test cases pass
2011-06-14 pvtroshinIUPred wrapper, tester and new binary for X64 linux...
2011-06-01 pvtroshinChanges to return type of Executable.getType() method...
2011-04-18 pvtroshinRefactor:
2011-02-14 pvtroshinChange the way to deal with Limits to simplify wrapper...
2011-02-14 pvtroshinChange the way to deal with Limits to simplify wrapper...
2011-02-10 pvtroshinReplace Map<String, HashSet<Score>> with ScoreManager...
2011-02-09 pvtroshinDisEMBL and GlobProt web services further work
2011-02-09 pvtroshinGlobPlot and DIsembl execs all test passed
2011-02-07 pvtroshinGlobPlot service, runner and result parser
2011-02-04 pvtroshinDisembl and Jronn web services work. Modified to produc...
2011-02-03 pvtroshinParser for DisEMBL results and finished runner, few...
2011-02-03 pvtroshinDisembl further implementation
2011-02-02 pvtroshinRemove Annotated and MuptiAnnotated Sequence use Score...
2010-12-21 pvtroshinAAConWS further work
2010-12-03 pvtroshinAAConWS further work and test cases
2010-12-02 pvtroshinAAConWS is working
2010-11-29 pvtroshinAAConWS further work
2010-11-24 pvtroshinMore work on AAConWS not finished yet!
2010-11-22 pvtroshinAdding AAConWS
2010-07-26 pvtroshinAdding disembl wrapper
2010-07-23 pvtroshinJronn multi core support
2010-07-22 pvtroshinSet number of thread for execution
2010-07-22 pvtroshinSome refactoring
2010-07-22 pvtroshinJronn tester
2010-07-21 pvtroshinAdd JRonn runner, tester, methods to parse jronn outpu...
2010-07-20 pvtroshinFix copyright header
2010-07-20 pvtroshinChanges from JWS3 is merged
2010-07-20 pvtroshinNext version of JABA